You searched for subject:(signaling pathway)
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1.
Zhang, Rengjing.
Lurking Pathway Prediction And Pathway ODE Model Dynamic Analysis.
Degree: 2013, Texas Digital Library
URL: http://hdl.handle.net/1969;
http://hdl.handle.net/2249.1/66737
► Signaling pathway analysis is so important to study the causes of diseases and the treatment of drugs. Finding the lurking pathway from ligand to signature…
(more)
▼ Signaling pathway analysis is so important to study the causes of diseases and
the treatment of drugs. Finding the lurking
pathway from ligand to signature is a significant issue
in studying the mechanism of how the cell response to the stimulation signal. However, recent
literature based
pathway analysis methods can only tell about highly differentially expressed
pathways related to the experiment data, which may tell nothing about our interested specific
ligand and signature.
In this paper, we designed an approach to successfully detect the most reliable pathways for
specific ligand and signature by solving multi-objective optimization problem on the bridge
connecting two
signaling pathways where the ligand and sig- nature locate. The
pathway bridge
consisted of enriched looping patterns refined the complicated entire protein interactions network
with 39031 links, which made the approach time-saving. The approach was further applied to study
the mod- ulator mechanism of the signal molecule, receptor, intermediate transfer proteins,
transcription factor, and signature.
With preliminary studied pathways, we then employed Ordinary Differential Equations(ODE) to
modeling and dynamic analysis the
signaling transduction. The biological reactions were
represented in terms of differential equations, and the solu- tions to the group of equations were
further be optimized to fit the RPPA experiment data. In order to find the potential
signaling
paths in specific disease and discovery the best therapy, coefficient variation analysis, system
robustness study and system outcomes changes to perturbations were also utilized.
Our approach successfully predicted the lurking
pathway for the signal molecule T GF ??1 and the nova protein OC I AD2 in cancer microenviroment: T GF ??1 ???T GF ??R1 ??? SM AD2/3 ??? SM AD4/AR ??? OC I AD2, and this result was verified by literature. Better than recent
pathway analysis tool, our predicted
pathway also took care of significant but relatively less regulated proteins in the transduction pro- cess. And by modeling the CCL2
pathway in MTB infected cells, J N K , cM Y C and P LC showed as the most significant modules. Hence, the drug treatments inhibit- ing J N K , cM Y C and P LC would effectively obstruct the increasing of MMPs and further prevent the Mtb infections.
Advisors/Committee Members: Xiong, Zixiang (advisor).
Subjects/Keywords: Signaling Pathway
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APA (6th Edition):
Zhang, R. (2013). Lurking Pathway Prediction And Pathway ODE Model Dynamic Analysis. (Thesis). Texas Digital Library. Retrieved from http://hdl.handle.net/1969; http://hdl.handle.net/2249.1/66737
Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation
Chicago Manual of Style (16th Edition):
Zhang, Rengjing. “Lurking Pathway Prediction And Pathway ODE Model Dynamic Analysis.” 2013. Thesis, Texas Digital Library. Accessed January 28, 2021.
http://hdl.handle.net/1969; http://hdl.handle.net/2249.1/66737.
Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation
MLA Handbook (7th Edition):
Zhang, Rengjing. “Lurking Pathway Prediction And Pathway ODE Model Dynamic Analysis.” 2013. Web. 28 Jan 2021.
Vancouver:
Zhang R. Lurking Pathway Prediction And Pathway ODE Model Dynamic Analysis. [Internet] [Thesis]. Texas Digital Library; 2013. [cited 2021 Jan 28].
Available from: http://hdl.handle.net/1969; http://hdl.handle.net/2249.1/66737.
Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation
Council of Science Editors:
Zhang R. Lurking Pathway Prediction And Pathway ODE Model Dynamic Analysis. [Thesis]. Texas Digital Library; 2013. Available from: http://hdl.handle.net/1969; http://hdl.handle.net/2249.1/66737
Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation
2.
Yu, Kebing.
A Phosphoproteomic Study of Insulin Signaling Pathway Using
A Novel High-Throughput Pipeline.
Degree: PhD, Chemistry, 2009, Brown University
URL: https://repository.library.brown.edu/studio/item/bdr:199/
► Recent advances in the speed and sensitivity of mass spectrometers and analytical methods, the exponential acceleration of computer powers, and the availability of genomic databases…
(more)
▼ Recent advances in the speed and sensitivity of mass
spectrometers and analytical methods, the exponential acceleration
of computer powers, and the availability of genomic databases from
an array of species have led to a deluge of proteomic data.
Unfortunately, this enhancement has not been accompanied by a
concomitant increase in the availability of tools allowing users to
efficiently analyze these data. Often the manual aggregation and
analysis of proteomic data in current software distract
investigators from the biological meaning of their data, leading to
the all-too-frequent deposition of data into scientific literature
with little biological interpretation. We seek to fill the gap by
providing a high-throughput autonomous proteomic analysis pipeline
with the following critical components: liquid chromatography/mass
spectrometry (LC/MS) acquisition control, peptide validation,
quantitative data exploration, and protein network analysis. The
automated LC/MS control tool provides reproducible and sensitive
multi-dimensional sample analysis. Instrument acquired data are
streamlined to a customized proteomic pipeline for database
searching and post-acquisition calculation. The logistic spectral
score we developed for high-throughput statistical validation of
database assignment outperforms SEQUEST XCorr (3.4-fold more
peptides) and X!Tandem E-Value (1.9-fold more peptides) at a 1%
false discovery rate estimated by decoy database. All calculation
results are directed into a relational database for organization of
proteomic results, collation of experimental data with available
protein information resources, and visual comparison of multiple
proteomic experiments. This platform provides flexible adaptation
to diverse workflows for individual proteomics labs and enables
proteomic scientists to modify the presentation of the proteomic
data, implement extra data-dependent analysis tasks and process
additional input formats. The utility of this system is illustrated
through analysis of insulin
signaling pathway important to liver
cancers. We explored changes in phosphorylation quantitatively in
hIRS1-transfected NIH3T3 cells in response to insulin stimulation
using a label-free/SILAC hybrid quantitation approach. In the
NIH3T3-hIRS1/NIH3T3-hIRS1 Y1180F timecourse, we discovered 2201
phosphorylation sites at 1% false discovery rate, among which 84.6%
were on Serine, 13.6% were on Threonine and 1.8% were on
Tyrosine.
Advisors/Committee Members: Salomon, Arthur (director), Sun, Shouheng (reader), Bazemore-Walker, Carthene (reader).
Subjects/Keywords: Signaling Pathway
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❌
APA ·
Chicago ·
MLA ·
Vancouver ·
CSE |
Export
to Zotero / EndNote / Reference
Manager
APA (6th Edition):
Yu, K. (2009). A Phosphoproteomic Study of Insulin Signaling Pathway Using
A Novel High-Throughput Pipeline. (Doctoral Dissertation). Brown University. Retrieved from https://repository.library.brown.edu/studio/item/bdr:199/
Chicago Manual of Style (16th Edition):
Yu, Kebing. “A Phosphoproteomic Study of Insulin Signaling Pathway Using
A Novel High-Throughput Pipeline.” 2009. Doctoral Dissertation, Brown University. Accessed January 28, 2021.
https://repository.library.brown.edu/studio/item/bdr:199/.
MLA Handbook (7th Edition):
Yu, Kebing. “A Phosphoproteomic Study of Insulin Signaling Pathway Using
A Novel High-Throughput Pipeline.” 2009. Web. 28 Jan 2021.
Vancouver:
Yu K. A Phosphoproteomic Study of Insulin Signaling Pathway Using
A Novel High-Throughput Pipeline. [Internet] [Doctoral dissertation]. Brown University; 2009. [cited 2021 Jan 28].
Available from: https://repository.library.brown.edu/studio/item/bdr:199/.
Council of Science Editors:
Yu K. A Phosphoproteomic Study of Insulin Signaling Pathway Using
A Novel High-Throughput Pipeline. [Doctoral Dissertation]. Brown University; 2009. Available from: https://repository.library.brown.edu/studio/item/bdr:199/

Univerzitet u Beogradu
3.
Pantelić, Marija M., 1981-.
Утицај пероралне апликације хрома на ендокрини и
метаболички статус крава холштајн расе.
Degree: Fakultet veterinarske medicine, 2019, Univerzitet u Beogradu
URL: https://fedorabg.bg.ac.rs/fedora/get/o:19217/bdef:Content/get
► Ветеринарска медицина - Физиологија / Veterinary medicine - Physiology
Циљ ове докторске дисертације је био да се испита утицај органског комплекса тровалентног хрома на високомлечне…
(more)
▼ Ветеринарска медицина - Физиологија / Veterinary
medicine - Physiology
Циљ ове докторске дисертације је био да се испита
утицај органског комплекса тровалентног хрома на високомлечне краве
у периоду касног гравидитета и ране лактације, као и његов утицај
на млечност. Тридесет дана пре очекиваног термина тељења је
одабрано 20 крава холштајн расе које су подељене у две једнаке
групе контролну (–Cr) и огледну (+Cr). У периоду од 25. дана пре
очекиваног термина тељења до 30. дана после тељења, +Cr група крава
је свакодневно перорално са јутарњим оброком добијала 10 mg,
односно 5 g препарата са органски везаним хромом (0,2 % органског
препарата тровалентног хрома везаног у квасцу (Co-Factor III Cr
Yeast, Alltech). Интравенски тест толеранције глукозе (IVGTT) је
урађен на укупно 12 крава (n=6 крава по групи) четири пута током
испитиваног периода и то 28. и 7. дана пре очекиваног термина
тељења као и 10. и 30. дана после тељења. Крв је узимана 0., 15.,
30., 60., 90., 120. минута теста за одређивање концентрација
глукозе и инсулина. Коришћењем података добијених током IVGTT
урађена је и кинетика глукозе и инсулина. У узорцима крви узетим 0.
минута IVGTT одређена је, поред концентрација глукозе и инсулина,
концентрација NEFA (non-esterified fatty acids), BHBА (beta
hydroxybutyric acid), укупних протеина, албумина, урее,
холестерола, триглицерида (TG), укупног билирубина (TB), Mg, Ca, P
и кортизола, као и активности AST и GGT. У циљу испитивања
инсулинске резистенције периферних ткива обрачунат је RQUICKI
(Revised Quantitative Insulin Sensitivity Check Index) који је
показатељ осетљивости ткива на инсулин. Узорци мишићног и масног
ткива су узимани биопсијом четири пута у току огледног периода и то
30. и 10. дана пре очекиваног термина тељења као и 7. и 28. дана
после тељења, када је урађена и процена телесне кондиције (BCS-body
condition score)...
Advisors/Committee Members: Kirovski, Danijela, 1969-.
Subjects/Keywords: bovine; chromium; insulin signaling
pathway
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❌
APA ·
Chicago ·
MLA ·
Vancouver ·
CSE |
Export
to Zotero / EndNote / Reference
Manager
APA (6th Edition):
Pantelić, Marija M., 1. (2019). Утицај пероралне апликације хрома на ендокрини и
метаболички статус крава холштајн расе. (Thesis). Univerzitet u Beogradu. Retrieved from https://fedorabg.bg.ac.rs/fedora/get/o:19217/bdef:Content/get
Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation
Chicago Manual of Style (16th Edition):
Pantelić, Marija M., 1981-. “Утицај пероралне апликације хрома на ендокрини и
метаболички статус крава холштајн расе.” 2019. Thesis, Univerzitet u Beogradu. Accessed January 28, 2021.
https://fedorabg.bg.ac.rs/fedora/get/o:19217/bdef:Content/get.
Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation
MLA Handbook (7th Edition):
Pantelić, Marija M., 1981-. “Утицај пероралне апликације хрома на ендокрини и
метаболички статус крава холштајн расе.” 2019. Web. 28 Jan 2021.
Vancouver:
Pantelić, Marija M. 1. Утицај пероралне апликације хрома на ендокрини и
метаболички статус крава холштајн расе. [Internet] [Thesis]. Univerzitet u Beogradu; 2019. [cited 2021 Jan 28].
Available from: https://fedorabg.bg.ac.rs/fedora/get/o:19217/bdef:Content/get.
Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation
Council of Science Editors:
Pantelić, Marija M. 1. Утицај пероралне апликације хрома на ендокрини и
метаболички статус крава холштајн расе. [Thesis]. Univerzitet u Beogradu; 2019. Available from: https://fedorabg.bg.ac.rs/fedora/get/o:19217/bdef:Content/get
Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation

Virginia Commonwealth University
4.
Kim, Seung L.
Effect of Manipulation of Notch Signaling Pathway on Neural Stem Cell Proliferation in the Hippocampus Following Traumatic Brain Injury.
Degree: MS, Anatomy & Neurobiology, 2019, Virginia Commonwealth University
URL: https://doi.org/10.25772/TRS0-X522
;
https://scholarscompass.vcu.edu/etd/5777
► Effect of Manipulation of Notch Signaling Pathway on Neural Stem Cell Proliferation in the Hippocampus Following Traumatic Brain Injury By Seung L. Kim A…
(more)
▼ Effect of Manipulation of Notch
Signaling Pathway on Neural Stem Cell Proliferation in the Hippocampus Following Traumatic Brain Injury
By Seung L. Kim A thesis statement submitted for degree requirement in Mater of Science Virginia Commonwealth University, 2019 Advisor: Dong Sun, MD. PhD. Department of Anatomy & Neurobiology
The Notch
signaling pathway is known as a core
signaling system in maintaining neural stem cells (NSCs) in embryonic development and adulthood including cell proliferation, maturation, and cell fate decision. Proliferation of NSCs persists throughout lifespan in neurogenic niches and is often upregulated following neurological insults including traumatic brain injury (TBI). Therefore, NSCs are viewed as the brain’s endogenous source for repair and regeneration. We speculate Notch
signaling pathway is also involved in injury-induced cell proliferation in the neurogenic niche following TBI. TBI, which is a leading cause of death and disability, has been a huge burden to our society. Many efforts have been made in attempt to treat and manage TBI.
In this study, we examined the involvement of Notch
signaling pathway in injury induced NSC proliferation in the neurogenic niche, by administering exogenous Notch ligands including, Notch agonist or antagonist. Adult rats were intraventricularly infused with Notch1 receptor agonists (anti-Notch1 antibody at the dose of 0.5, 2 or 4μg/ml), Notch1 receptor antagonist (recombinant Jagged1 fusion protein at the dose of 25, 50 or 100μg/ml) or vehicle for 7 days following TBI. 5-bromo-2-deoxyuridine (BrdU) was administered single daily via intraperitoneal injection to label proliferating cells for 7 days post injury. The animals were sacrificed on the 7th day at 2 hours after the last BrdU injection. Sequential vibratome sliced coronal brain sections were processed for proliferation marker BrdU, Ki67 or immature neuronal marker DCX staining. BrdU, Ki67 or DCX-labeled cells in the dentate gyrus of the hippocampus were quantified using unbiased stereological method. We found TBI in the form of moderate lateral fluid percussion injury (LFPI) induced cell proliferation was further augmented by 7-day infusion of Notch agonist (Notch1-2μg/ml) as shown by BrdU and Ki67 labeling. Further, 7-day infusion of Notch antagonist (Jagged1-50μg/ml) post-injury greatly reduced the number of BrdU+ cells. However, ambiguous dose related responses were also observed where 7-day infusion of higher dose of Notch agonist (Notch1-4μg/ml) resulted in reduced cell proliferation. No major changes in the numbers of newly generated neurons were observed across the animals, except a slight reduction in Notch agonist (Notch1-2μg/ml) and Notch antagonist (Jagged1-50μg/ml) infused animals as shown by DCX labeling. Infusion of Notch agonist or antagonist affects NSC proliferation following TBI suggesting the involvement of Notch
signaling pathway in regulating post-TBI NSC proliferation in the neurogenic niche. For the unexpected opposite…
Advisors/Committee Members: Dong Sun.
Subjects/Keywords: Notch Signaling Pathway; Neuroscience and Neurobiology
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❌
APA ·
Chicago ·
MLA ·
Vancouver ·
CSE |
Export
to Zotero / EndNote / Reference
Manager
APA (6th Edition):
Kim, S. L. (2019). Effect of Manipulation of Notch Signaling Pathway on Neural Stem Cell Proliferation in the Hippocampus Following Traumatic Brain Injury. (Thesis). Virginia Commonwealth University. Retrieved from https://doi.org/10.25772/TRS0-X522 ; https://scholarscompass.vcu.edu/etd/5777
Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation
Chicago Manual of Style (16th Edition):
Kim, Seung L. “Effect of Manipulation of Notch Signaling Pathway on Neural Stem Cell Proliferation in the Hippocampus Following Traumatic Brain Injury.” 2019. Thesis, Virginia Commonwealth University. Accessed January 28, 2021.
https://doi.org/10.25772/TRS0-X522 ; https://scholarscompass.vcu.edu/etd/5777.
Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation
MLA Handbook (7th Edition):
Kim, Seung L. “Effect of Manipulation of Notch Signaling Pathway on Neural Stem Cell Proliferation in the Hippocampus Following Traumatic Brain Injury.” 2019. Web. 28 Jan 2021.
Vancouver:
Kim SL. Effect of Manipulation of Notch Signaling Pathway on Neural Stem Cell Proliferation in the Hippocampus Following Traumatic Brain Injury. [Internet] [Thesis]. Virginia Commonwealth University; 2019. [cited 2021 Jan 28].
Available from: https://doi.org/10.25772/TRS0-X522 ; https://scholarscompass.vcu.edu/etd/5777.
Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation
Council of Science Editors:
Kim SL. Effect of Manipulation of Notch Signaling Pathway on Neural Stem Cell Proliferation in the Hippocampus Following Traumatic Brain Injury. [Thesis]. Virginia Commonwealth University; 2019. Available from: https://doi.org/10.25772/TRS0-X522 ; https://scholarscompass.vcu.edu/etd/5777
Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation

University of Southern California
5.
Ramanathan, Anita.
Defining function of an autism pathway in human neuronal
cells.
Degree: MS, Biochemistry and Molecular Biology, 2011, University of Southern California
URL: http://digitallibrary.usc.edu/cdm/compoundobject/collection/p15799coll127/id/627881/rec/1819
► Autism is a neurodevelopmental disorder that affects 1% of the population and causes deficits in social interaction, communication and behavioral flexibility. Autism is highly heritable,…
(more)
▼ Autism is a neurodevelopmental disorder that affects
1% of the population and causes deficits in social interaction,
communication and behavioral flexibility. Autism is highly
heritable, but multiple genes appear to contribute to the disorder.
Recent research indicates that several genes in the
phosphoinositide‐3‐kinase (PI3K)
signaling pathway contribute to
autism risk (Levitt & Campbell, 2009, Journal of Clinical
Investigation, 119: 747). Moreover, many neurodevelopmental
syndromes like neurofibromatosis, tuberous sclerosis and Fragile X,
having significant rates of co-occurring autism, show evident
disruption in the
signaling of the PI3K
pathway. ❧ Dysfunction of
the PI3K
pathway signaling has been described extensively in cancer
cells, and although it has received substantial implications in
ASD, it has not been studied in brain cells. To begin to understand
how PI3K
signaling is disrupted in autism, we propose experiments
in human neuronal cell lines that use the tools developed by years
of cancer research. The cancer literature indicates this
pathway
can be manipulated by the use of pharmacological inhibitors of
PI3K. We plan to study the effect of an array of inhibitors of PI3K
as well as its individual subunits on the cellular
signaling
pathway of these neuronal cell lines.
Advisors/Committee Members: Tokes, Zoltan A. (Committee Chair), Campbell, Daniel (Committee Member), Laird, Ite (Committee Member).
Subjects/Keywords: autism; luminex; PI3K signaling; PI3K Akt pathway
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❌
APA ·
Chicago ·
MLA ·
Vancouver ·
CSE |
Export
to Zotero / EndNote / Reference
Manager
APA (6th Edition):
Ramanathan, A. (2011). Defining function of an autism pathway in human neuronal
cells. (Masters Thesis). University of Southern California. Retrieved from http://digitallibrary.usc.edu/cdm/compoundobject/collection/p15799coll127/id/627881/rec/1819
Chicago Manual of Style (16th Edition):
Ramanathan, Anita. “Defining function of an autism pathway in human neuronal
cells.” 2011. Masters Thesis, University of Southern California. Accessed January 28, 2021.
http://digitallibrary.usc.edu/cdm/compoundobject/collection/p15799coll127/id/627881/rec/1819.
MLA Handbook (7th Edition):
Ramanathan, Anita. “Defining function of an autism pathway in human neuronal
cells.” 2011. Web. 28 Jan 2021.
Vancouver:
Ramanathan A. Defining function of an autism pathway in human neuronal
cells. [Internet] [Masters thesis]. University of Southern California; 2011. [cited 2021 Jan 28].
Available from: http://digitallibrary.usc.edu/cdm/compoundobject/collection/p15799coll127/id/627881/rec/1819.
Council of Science Editors:
Ramanathan A. Defining function of an autism pathway in human neuronal
cells. [Masters Thesis]. University of Southern California; 2011. Available from: http://digitallibrary.usc.edu/cdm/compoundobject/collection/p15799coll127/id/627881/rec/1819
6.
Kachrilas, Stefanos.
Γενετικές και επιγενετικές αλλαγές στο μονοπάτι σηματοδότησης p13k / akt στον καρκίνο της ουροδόχου κύστεως.
Degree: 2018, National and Kapodistrian University of Athens; Εθνικό και Καποδιστριακό Πανεπιστήμιο Αθηνών (ΕΚΠΑ)
URL: http://hdl.handle.net/10442/hedi/43242
► The purpose of this PhD thesis was to examine the involvement of specific components of the PI3K/AKT pathway in urinary bladder cancer. Samples from sixty-five…
(more)
▼ The purpose of this PhD thesis was to examine the involvement of specific components of the PI3K/AKT pathway in urinary bladder cancer. Samples from sixty-five tumors and thirteen normal bladder tissues were collected. Genomic DNA isolation from snap-frozen and paraffin-embedded laser-microdissected tissues was followed by Sanger sequencing, whereas total RNA was purified for use in RT-PCR analyses. Immunohistochemistry was carried out on sections of paraffin-embedded biopsy material.Three pathogenic mutations (two missense and one frameshift) were identified in exon 20 of PIK3CA {c.3140A>G (p.His1047Arg), c.[3172A>T(;)3174C>T] (p.lle1058Phe), c.3203dupA (p.Asn1068Lysfs*5)} after laser capture microdissection, whereas PTEN mRNA expression was found to be downregulated in bladder cancer tissues compared to normal bladder urothelium. Upregulation of cytoplasmic and nuclear p-AKT expression was detected in low grade tumors, whereas in muscle invasive tumors, p-AKT was shown to be downregulated and confined to the cytoplasm. PTEN expression was weak and mainly cytoplasmic in superficial tumors, but stronger and nuclear in the muscle invasive tumors.In conclusion, PI3K/AKT pathway activation is involved in bladder cancer initiation and progression. In this context, PIK3CA, p-AKT and nuclear PTEN could be used along with other biomarkers for prognostic purposes and for the selection of appropriate therapy in the clinical management of bladder cancer.
Σκοπός αυτής της διδακτορικής διατριβής ήταν να εξετάσει τη πιθανή εμπλοκή του μοριακού μονοπατιού PI3K/AKT στο καρκίνο της ουροδόχου κύστης. Πραγματοποιήθηκε λήψη δειγμάτων από εξήντα πέντε όγκους κύστης και από δεκατρία φυσιολογικούς ιστούς ουροθηλίου της κύστης. Πραγματοποιήθηκε απομόνωση DNA, ακολουθία Sanger, εξέταση RNA, RT-PCR, καθώς και ανοσοιστοχημεία. Διαπιστώθηκαν τρεις παθογενετικές μεταλλάξεις (2 missense, 1 frameshift) στο εξόνιο 20 του PIK3CA {c.3140A>G (p.His1047Arg), c.[3172A>T(;)3174C>T] (p.lle1058Phe), c.3203dupA (p.Asn1068Lysfs*5). Η έκφραση του PTEN mRNA διαπιστώθηκε ότι ήταν μειωμένη στο καρκίνο της κύστης σε σύγκριση με το φυσιολογικό ουροθήλιο της κύστης. Η έκφραση του p-AKT βρέθηκε αυξημένη στο κυτταρόπλασμα και το πυρήνα σε όγκους επιφανειακούς (μη μυοδηιθητικούς) σε αντίθεση με τους μυοδηιθητικούς όγκους όπου η έκφραση του p-AKT βρέθηκε μειωμένη και περιορισμένη κυρίως στο κυτταρόπλασμα. Η έκφραση του PTEN διαπιστώθηκε ότι ήταν ασθενής και κυρίως κυτταροπλασματική στους επιφανειακούς όγκους (μη μυοδηιθητικούς), ενώ στους μυοδιηθητικούς ήταν ισχυρότερη και κυρίως πυρηνική.Συμπερασματικά, το μοριακό μονοπάτι PI3K/AKT εμπλέκεται στην εξέλιξη του καρκίνου της ουροδόχου κύστης και η μέτρηση μορίων του (PIK3CA, p-AKT, PTEN) σε συνδυασμό και με άλλους βιοδείκτες θα μπορύσε να έχει προγνωστικό και θεραπευτικό ρόλο.
Subjects/Keywords: PI3K / Akt signaling pathway; Cancer; Bladder cancer
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APA ·
Chicago ·
MLA ·
Vancouver ·
CSE |
Export
to Zotero / EndNote / Reference
Manager
APA (6th Edition):
Kachrilas, S. (2018). Γενετικές και επιγενετικές αλλαγές στο μονοπάτι σηματοδότησης p13k / akt στον καρκίνο της ουροδόχου κύστεως. (Thesis). National and Kapodistrian University of Athens; Εθνικό και Καποδιστριακό Πανεπιστήμιο Αθηνών (ΕΚΠΑ). Retrieved from http://hdl.handle.net/10442/hedi/43242
Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation
Chicago Manual of Style (16th Edition):
Kachrilas, Stefanos. “Γενετικές και επιγενετικές αλλαγές στο μονοπάτι σηματοδότησης p13k / akt στον καρκίνο της ουροδόχου κύστεως.” 2018. Thesis, National and Kapodistrian University of Athens; Εθνικό και Καποδιστριακό Πανεπιστήμιο Αθηνών (ΕΚΠΑ). Accessed January 28, 2021.
http://hdl.handle.net/10442/hedi/43242.
Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation
MLA Handbook (7th Edition):
Kachrilas, Stefanos. “Γενετικές και επιγενετικές αλλαγές στο μονοπάτι σηματοδότησης p13k / akt στον καρκίνο της ουροδόχου κύστεως.” 2018. Web. 28 Jan 2021.
Vancouver:
Kachrilas S. Γενετικές και επιγενετικές αλλαγές στο μονοπάτι σηματοδότησης p13k / akt στον καρκίνο της ουροδόχου κύστεως. [Internet] [Thesis]. National and Kapodistrian University of Athens; Εθνικό και Καποδιστριακό Πανεπιστήμιο Αθηνών (ΕΚΠΑ); 2018. [cited 2021 Jan 28].
Available from: http://hdl.handle.net/10442/hedi/43242.
Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation
Council of Science Editors:
Kachrilas S. Γενετικές και επιγενετικές αλλαγές στο μονοπάτι σηματοδότησης p13k / akt στον καρκίνο της ουροδόχου κύστεως. [Thesis]. National and Kapodistrian University of Athens; Εθνικό και Καποδιστριακό Πανεπιστήμιο Αθηνών (ΕΚΠΑ); 2018. Available from: http://hdl.handle.net/10442/hedi/43242
Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation

University of Notre Dame
7.
Anthony E Clemons.
Conserved Developmental Cues of Aedes aegypti and their
Impact on the Mosquito Vector</h1>.
Degree: Biological Sciences, 2014, University of Notre Dame
URL: https://curate.nd.edu/show/w089280462m
► Gene expression during embryogenesis impacts adult mosquito fitness, the ability of an organism to survive and transmit its genotype to offspring as compared to…
(more)
▼ Gene expression during embryogenesis impacts
adult mosquito fitness, the ability of an organism to survive and
transmit its genotype to offspring as compared to competing
organisms. Sequencing of the Ae. aegypti genome has made possible
the characterization of many genes, but analysis of developmental
genes has proven challenging, largely as a result of technical
difficulties encountered when manipulating mosquito embryos. First,
techniques that focused on handling/manipulation of embryos and
various analytics were designed (Chapter 2). With these techniques
I was able to properly rear, fix, stain and perform functional
analyses on embryos. Even with these techniques, genes important to
organismal development remained fairly uncharacterized. Second, we
used comparative genomics to study genes in Ae. aegypti that are
found to be homologous to developmental genes in Drosophila
melanogaster, a genetic model organism. Doing so I was able to show
that Netrin/Frazzled
signaling at the CNS midline was conserved
(Chapter 3) between the mosquito and fruit fly. I showed via RNAi,
immunohistochemistry and in situ hybridization that frazzled (fra)
expression is important for proper axon guidance. In D.
melanogaster axon guidance genes are known to control salivary
gland migration during development. Salivary glands are critical to
disease transmission in mosquitoes. Although there was a level of
gene conservation shown in CNS development, development of the
salivary glands is different (Chapter 4). Lastly, there are
populations of Ae. aegypti, that show differences in
susceptibilities to pathogens. The noticeable physiological
difference between the two is body size. Body size in all organisms
is controlled by Insulin
Signaling (IIS). Developmental stressors
are shown to decrease overall body size, but increase longevity and
pathogen resistance. Stress during development modulates IIS.
Stress
Signaling is activated by c-Jun N-Terminal Kinase (Jnk) and
regulated by Puckered (Puc) phosphatase. I found the smaller less
susceptible Moyo-R subpopulation expresses higher levels of jnk at
all stages of development when compared to the larger more
susceptible Moyo-S subpopulation (Chapter 5). In future studies, we
intend to show RNAi of puc in Moyo-S will lead to smaller and less
susceptible mosquitoes.
Advisors/Committee Members: David W Severson, Committee Co-Chair, Michael Ferdig, Committee Member, Molly Duman-Scheel, Committee Co-Chair, John Duman, Committee Member, Frank Collins, Committee Member.
Subjects/Keywords: Aeded aegypti; Puckered; C-Jun N-terminal Kinase; insulin signaling pathway; stress signaling pathway
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❌
APA ·
Chicago ·
MLA ·
Vancouver ·
CSE |
Export
to Zotero / EndNote / Reference
Manager
APA (6th Edition):
Clemons, A. E. (2014). Conserved Developmental Cues of Aedes aegypti and their
Impact on the Mosquito Vector</h1>. (Thesis). University of Notre Dame. Retrieved from https://curate.nd.edu/show/w089280462m
Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation
Chicago Manual of Style (16th Edition):
Clemons, Anthony E. “Conserved Developmental Cues of Aedes aegypti and their
Impact on the Mosquito Vector</h1>.” 2014. Thesis, University of Notre Dame. Accessed January 28, 2021.
https://curate.nd.edu/show/w089280462m.
Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation
MLA Handbook (7th Edition):
Clemons, Anthony E. “Conserved Developmental Cues of Aedes aegypti and their
Impact on the Mosquito Vector</h1>.” 2014. Web. 28 Jan 2021.
Vancouver:
Clemons AE. Conserved Developmental Cues of Aedes aegypti and their
Impact on the Mosquito Vector</h1>. [Internet] [Thesis]. University of Notre Dame; 2014. [cited 2021 Jan 28].
Available from: https://curate.nd.edu/show/w089280462m.
Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation
Council of Science Editors:
Clemons AE. Conserved Developmental Cues of Aedes aegypti and their
Impact on the Mosquito Vector</h1>. [Thesis]. University of Notre Dame; 2014. Available from: https://curate.nd.edu/show/w089280462m
Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation

University of Iowa
8.
Zheng, Chaoqun.
Molecular mechanisms of the anti-cancer action of schweinfurthins.
Degree: PhD, Molecular and Cellular Biology, 2015, University of Iowa
URL: https://ir.uiowa.edu/etd/1815
► Schweinfurthins are a family of natural products with significant anti-cancer activities. They were originally identified in the National Cancer Institute (NCI) human 60 cancer…
(more)
▼ Schweinfurthins are a family of natural products with significant anti-cancer activities. They were originally identified in the National Cancer Institute (NCI) human 60 cancer cell line screening. The growth inhibition profile of schweinfurthins is distinct from other clinically used anti-cancer agents, indicating that they have a novel mechanism of action or have a previously unrecognized protein target. Previous studies showed that schweinfurthins affect multiple cellular processes in cancer cells. For example, schweinfurthins can alter cytoskeleton organization, induce ER stress and apoptosis, and inhibit the mevalonate
pathway. The mevalonate
pathway is responsible for the production of isoprenoids and cholesterol, which have been shown to play regulatory roles in the Hedgehog (Hh)
signaling pathway. In this study, we found that the Hh
signaling pathway in NIH-3T3 and SF-295 cells was inhibited by schweinfurthins. The supplementation of mevalonate and cholesterol partially restored Hh
signaling, indicating that schweinfurthins inhibit Hh
signaling partially by down-regulating the products from the mevalonate
pathway. Interestingly, schweinfurthins in combination with cyclopamine, an inhibitor of the Hh singaling
pathway, synergistically decreased cell viability.
In order to better understand the underlying mechanism of the anti-cancer action of schweinfurthins, we attempted to identify the protein target of schweifnurthins. Affinity chromatography was performed to pull down the protein target. We found that schweinfurhtins bound to the M2 isoform of pyruvate kinase (PKM2) and inhibit its pyruvate kinase activity. Knockdown of PKM2 by siRNA increased the sensitivity of SF-295 cells to schweinfurthins. The inhibition of PKM2 by schweinfurthins led to a reduction in the rate of glycolysis in cancer cells. Fructose 1,6-bisphosphate (FBP), an activator of PKM2, could alleviate schweinfurthin-mediated inhibition on PKM2 and glycolysis. Notably, FBP could also partially reverse the reduction of cell viability in the presence of schweinfurthins. Taken together, these studies revealed the mechanism by which schweinfurthins inhibit Hh
signaling. In addition, we uncovered PKM2 as a schwienfurthin target and highlighted the importance of glycolysis suppression as a mechanism of the anti-cancer action of schweinfurthins.
Advisors/Committee Members: Hohl, Raymond J. (supervisor).
Subjects/Keywords: publicabstract; glioblastoma; glycolysis; PKM2; schweinfurthins; the Hedgehog signaling pathway; the mevalonate pathway; Cell Biology
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❌
APA ·
Chicago ·
MLA ·
Vancouver ·
CSE |
Export
to Zotero / EndNote / Reference
Manager
APA (6th Edition):
Zheng, C. (2015). Molecular mechanisms of the anti-cancer action of schweinfurthins. (Doctoral Dissertation). University of Iowa. Retrieved from https://ir.uiowa.edu/etd/1815
Chicago Manual of Style (16th Edition):
Zheng, Chaoqun. “Molecular mechanisms of the anti-cancer action of schweinfurthins.” 2015. Doctoral Dissertation, University of Iowa. Accessed January 28, 2021.
https://ir.uiowa.edu/etd/1815.
MLA Handbook (7th Edition):
Zheng, Chaoqun. “Molecular mechanisms of the anti-cancer action of schweinfurthins.” 2015. Web. 28 Jan 2021.
Vancouver:
Zheng C. Molecular mechanisms of the anti-cancer action of schweinfurthins. [Internet] [Doctoral dissertation]. University of Iowa; 2015. [cited 2021 Jan 28].
Available from: https://ir.uiowa.edu/etd/1815.
Council of Science Editors:
Zheng C. Molecular mechanisms of the anti-cancer action of schweinfurthins. [Doctoral Dissertation]. University of Iowa; 2015. Available from: https://ir.uiowa.edu/etd/1815

Baylor University
9.
Hudson, Geoffrey Marcus.
The effects of resveratrol supplementation on glucose/insulin kinetics and transcription of the AMPK and insulin signaling pathway at rest and following an oral glucose tolerance and graded exercise test in overweight women.
Degree: PhD, Health, Human Performance and Recreation., 2010, Baylor University
URL: http://hdl.handle.net/2104/8033
► The AMPK pathway plays a critical role in glucose metabolism and can potentially improve insulin resistance. Resveratrol is a natural polyphenolic compound that activates this…
(more)
▼ The AMPK
pathway plays a critical role in glucose metabolism and can potentially improve insulin resistance. Resveratrol is a natural polyphenolic compound that activates this
pathway. Therefore, the primary purpose of this study was to determine the effects of daily activation of the AMPK
pathway by resveratrol supplementation on glucose/insulin kinetics and transcriptional changes in the AMPK and insulin
signaling pathway at rest and following an oral glucose tolerance test (OGTT) and graded exercise test (GXT). Sixteen sedentary, overweight women were recruited for the study. In a randomized and double blind fashion, participants were divided into groups that consumed either 500 mg of resveratrol or a cellulose placebo twice daily for 7 days. On the sixth and seventh day, they returned for an OGTT and a GXT, respectively. Blood and muscle tissue was sampled prior to, and following both the OGTT and GXT. Multivariate analyses revealed no significant changes in resting serum glucose and insulin concentrations (p = 0.255), clinical chemistry safety markers (p = 0.309), or lipid profile panels (p = 0.051) following 7 days of resveratrol supplementation. Following the OGTT, serum glucose concentration was significantly increased 30 min (p < 0.001) and at 1 hr compared to baseline (p = 0.001). However, only a strong trend (p = 0.051) for increased serum insulin concentration was observed following the OGTT. The GXT protocol produced significant changes in serum glucose and insulin concentration. Glucose concentrations were significantly decreased at 1 hr when compared to baseline (p = 0.01) and 30 min (p = 0.032) post-exercise. Insulin concentrations were decreased at 1 hr (p = 0.012) and 2 hrs (p = 0.003) post-exercise. Resveratrol supplementation was unable to enhance such responses. No significant changes were observed with any of the genes analyzed. As a result, it appears that one week of resveratrol supplementation (500 mg/day) is not sufficient to enhance glucose/insulin homeostasis or transcription of metabolically-relevant genes in sedentary, overweight women. Since diabetes is still an increasing global health concern, it is evident that more research is needed to find ways to prevent and/or treat insulin resistance.
Advisors/Committee Members: Willoughby, Darryn Scott, 1963- (advisor), Cooke, Matthew B. (advisor).
Subjects/Keywords: Resveratrol.; Exercise physiology.; AMPK signaling pathway.; Insulin signaling pathway.
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❌
APA ·
Chicago ·
MLA ·
Vancouver ·
CSE |
Export
to Zotero / EndNote / Reference
Manager
APA (6th Edition):
Hudson, G. M. (2010). The effects of resveratrol supplementation on glucose/insulin kinetics and transcription of the AMPK and insulin signaling pathway at rest and following an oral glucose tolerance and graded exercise test in overweight women. (Doctoral Dissertation). Baylor University. Retrieved from http://hdl.handle.net/2104/8033
Chicago Manual of Style (16th Edition):
Hudson, Geoffrey Marcus. “The effects of resveratrol supplementation on glucose/insulin kinetics and transcription of the AMPK and insulin signaling pathway at rest and following an oral glucose tolerance and graded exercise test in overweight women.” 2010. Doctoral Dissertation, Baylor University. Accessed January 28, 2021.
http://hdl.handle.net/2104/8033.
MLA Handbook (7th Edition):
Hudson, Geoffrey Marcus. “The effects of resveratrol supplementation on glucose/insulin kinetics and transcription of the AMPK and insulin signaling pathway at rest and following an oral glucose tolerance and graded exercise test in overweight women.” 2010. Web. 28 Jan 2021.
Vancouver:
Hudson GM. The effects of resveratrol supplementation on glucose/insulin kinetics and transcription of the AMPK and insulin signaling pathway at rest and following an oral glucose tolerance and graded exercise test in overweight women. [Internet] [Doctoral dissertation]. Baylor University; 2010. [cited 2021 Jan 28].
Available from: http://hdl.handle.net/2104/8033.
Council of Science Editors:
Hudson GM. The effects of resveratrol supplementation on glucose/insulin kinetics and transcription of the AMPK and insulin signaling pathway at rest and following an oral glucose tolerance and graded exercise test in overweight women. [Doctoral Dissertation]. Baylor University; 2010. Available from: http://hdl.handle.net/2104/8033

University of Maine
10.
Muthukrishnan, Sree Deepthi.
Combinatorial Growth Factor Signaling Controls Nephron Progenitor Renewal and Differentiation.
Degree: PhD, Biomedical Sciences, 2016, University of Maine
URL: https://digitalcommons.library.umaine.edu/etd/2703
► Self-renewal and differentiation of nephron progenitor cells (NPCs) in the developing kidney is governed by three major growth factor pathways: BMP, FGF and WNT.…
(more)
▼ Self-renewal and differentiation of nephron progenitor cells (NPCs) in the developing kidney is governed by three major growth factor pathways: BMP, FGF and WNT. Mechanisms underlying the cross-talk between these pathways at the molecular level are largely unknown.
In this study, we demonstrate that BMP7 activates SMAD1/5
signaling in the distal region of the cap mesenchyme (CM) to promote the transition of early CITED1+ NPCs into the SIX2-only compartment. BMP7-mediated SMAD1/5
signaling synergizes with WNT9b-β-catenin
signaling in SIX2-only cells to induce the pro-differentiation program via
Wnt4 activation. We show that the pharmacological inhibition of SMAD1/5
signaling retains the NPCs in the CITED1+ progenitor state, delays cessation of nephrogenesis and increases nephron endowment in mice.
We also delineate the
pathway through which the proliferative BMP7 signal is transduced in CITED1+ NPCs. BMP7 activates the MAPKs TAK1 and JNK to phosphorylate the transcription factor JUN, which in turn governs the transcription of an AP-1 element containing G1 phase cell cycle regulators such as
Myc and
Ccnd1 to promote NPC proliferation. Conditional inactivation of
Tak1 or
Jun in the cap mesenchyme causes identical phenotypes characterized by premature depletion of NPCs. While JUN is regulated by BMP7, we find that its partner FOS is regulated by FGF9. We demonstrate that BMP7 and FGF9 coordinately regulate AP-1 transcription to promote G1-S cell cycle progression and NPC proliferation. Our findings identify a molecular mechanism explaining the important cooperation between two major NPC self-renewal pathways.
Advisors/Committee Members: Leif Oxburgh, Robert Friesel, Calvin Vary.
Subjects/Keywords: kidney development; nephron progenitors; BMP7 signaling; MAPK andSMAD pathway; AP-1 transcription factors; FGF signaling
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❌
APA ·
Chicago ·
MLA ·
Vancouver ·
CSE |
Export
to Zotero / EndNote / Reference
Manager
APA (6th Edition):
Muthukrishnan, S. D. (2016). Combinatorial Growth Factor Signaling Controls Nephron Progenitor Renewal and Differentiation. (Doctoral Dissertation). University of Maine. Retrieved from https://digitalcommons.library.umaine.edu/etd/2703
Chicago Manual of Style (16th Edition):
Muthukrishnan, Sree Deepthi. “Combinatorial Growth Factor Signaling Controls Nephron Progenitor Renewal and Differentiation.” 2016. Doctoral Dissertation, University of Maine. Accessed January 28, 2021.
https://digitalcommons.library.umaine.edu/etd/2703.
MLA Handbook (7th Edition):
Muthukrishnan, Sree Deepthi. “Combinatorial Growth Factor Signaling Controls Nephron Progenitor Renewal and Differentiation.” 2016. Web. 28 Jan 2021.
Vancouver:
Muthukrishnan SD. Combinatorial Growth Factor Signaling Controls Nephron Progenitor Renewal and Differentiation. [Internet] [Doctoral dissertation]. University of Maine; 2016. [cited 2021 Jan 28].
Available from: https://digitalcommons.library.umaine.edu/etd/2703.
Council of Science Editors:
Muthukrishnan SD. Combinatorial Growth Factor Signaling Controls Nephron Progenitor Renewal and Differentiation. [Doctoral Dissertation]. University of Maine; 2016. Available from: https://digitalcommons.library.umaine.edu/etd/2703

Purdue University
11.
Karim, Md Shahriar.
QUANTITATIVE MODELING OF SCALING OF PATTERNS AND RECEPTOR SIGNALING IN MORPHOGENESIS.
Degree: PhD, Agricultural and Biological Engineering, 2016, Purdue University
URL: https://docs.lib.purdue.edu/open_access_dissertations/1368
► Organs and tissue development often experience perturbations, but developmental processes seem to replicate a common body template to maintain appropriate proportions and positions. The key…
(more)
▼ Organs and tissue development often experience perturbations, but developmental processes seem to replicate a common body template to maintain appropriate proportions and positions. The key
signaling factors that guide a number of those processes are known as morphogens. Developing cells sense their respective positional information from a graded morphogen profile, and differentiate into patterns. Remarkably, patterns are highly robust and reproducible among species, and the underlying mechanisms associated with such high degrees of precision are still enigmatic. In addition, details of the signal, such as the Bone Morphogenetic Protein (BMP) signal, that transmit patterning information to a group of homogenous cells to differentiate is not well understood. Determining how developmental processes ensure robust patterning in the presence of perturbations maintain structural precision by scaling, and what regulatory mechanisms act to ensure robust and reproducible patterning are two longstanding questions that need unraveling. Moreover, determining the mechanisms by which BMP homodimers dominate
signaling in developing zebrafish embryos and other contexts is a key factor in understanding developmental regulation for a classic morphogen patterning.
Advisors/Committee Members: David M Umulis, Doraiswami Ramkrishna, Gregory T Buzzard, Kevin V Solomon.
Subjects/Keywords: BMP signaling pathway; Computational models; Morphogen signaling; Noise in BMP signaling; Pattern formation and scaling; Reaction-diffusion systems
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❌
APA ·
Chicago ·
MLA ·
Vancouver ·
CSE |
Export
to Zotero / EndNote / Reference
Manager
APA (6th Edition):
Karim, M. S. (2016). QUANTITATIVE MODELING OF SCALING OF PATTERNS AND RECEPTOR SIGNALING IN MORPHOGENESIS. (Doctoral Dissertation). Purdue University. Retrieved from https://docs.lib.purdue.edu/open_access_dissertations/1368
Chicago Manual of Style (16th Edition):
Karim, Md Shahriar. “QUANTITATIVE MODELING OF SCALING OF PATTERNS AND RECEPTOR SIGNALING IN MORPHOGENESIS.” 2016. Doctoral Dissertation, Purdue University. Accessed January 28, 2021.
https://docs.lib.purdue.edu/open_access_dissertations/1368.
MLA Handbook (7th Edition):
Karim, Md Shahriar. “QUANTITATIVE MODELING OF SCALING OF PATTERNS AND RECEPTOR SIGNALING IN MORPHOGENESIS.” 2016. Web. 28 Jan 2021.
Vancouver:
Karim MS. QUANTITATIVE MODELING OF SCALING OF PATTERNS AND RECEPTOR SIGNALING IN MORPHOGENESIS. [Internet] [Doctoral dissertation]. Purdue University; 2016. [cited 2021 Jan 28].
Available from: https://docs.lib.purdue.edu/open_access_dissertations/1368.
Council of Science Editors:
Karim MS. QUANTITATIVE MODELING OF SCALING OF PATTERNS AND RECEPTOR SIGNALING IN MORPHOGENESIS. [Doctoral Dissertation]. Purdue University; 2016. Available from: https://docs.lib.purdue.edu/open_access_dissertations/1368

NSYSU
12.
Tai , Po-han.
Therapeutic potential and mechanism of LECT2 for liver cancer.
Degree: Master, Institute of Biomedical Sciences, 2014, NSYSU
URL: http://etd.lib.nsysu.edu.tw/ETD-db/ETD-search/view_etd?URN=etd-0621114-111413
► Hepatocellular carcinoma (HCC) is one of the most common cancers in the world. However, current therapeutic modalities for HCC, including surgery, transendothelial embolization (TAE) and…
(more)
▼ Hepatocellular carcinoma (HCC) is one of the most common cancers in the world. However, current therapeutic modalities for HCC, including surgery, transendothelial embolization (TAE) and radiofrequency ablation (RFA), remain largely ineffectively. One major mechanism underlying the failure for cancer therapy is the presence of cancer stem cells (CSCs), which possess the capability of drug efflux and self renewal. The emergence of CSCs results in resistance and metastasis, which ultimately leads to tumor recurrence. Wnt/β-catenin
signaling pathway participates in CSCs genesis and targeting Wnt/β-catenin may hold promise for CSCs control. Leukocyte cell-derived chemotaxin 2 (LECT2) was first isolated as a 16-kDa secreted protein from cultured media of phytohemagglutinin-activated human T-cell leukemia SKW-3 cells. Recent studies suggest that LECT2 may act as a tumor suppressor gene in liver through antagonizing Wnt
signaling pathway. However, the detailed mechanism of LECT2 in liver cancer remains unclear. In this study, we first observed that intra-tumor LECT2 gene delivery effectively suppressed the progression of orthotopic Novikoff hepatoma in rats through apoptosis induction, angiogenesis blockade and cancer stemness inhibition. Subsequently, we investigated the role of LECT2 on oncogenic behaviors and stemness of hepatoma cells. Despite of marginal effect on proliferation, recombinant LECT2 dose-dependently inhibited the migration, invasion and anchorage-independent growth of HCC cells. Besides, LECT2 application attenuated the epithelial-mesenchymal transition (EMT), drug-efflux and self-renewal capabilities of HCC cells. This was correlated with the downregulation of EMT marker genes, Wnt/β-catenin
signaling pathway and c-Met activation. In summary, LECT2 suppresses HCC progression via attenuating the hepatic cancer stemness.
Advisors/Committee Members: Hung-Wen Huamg (chair), Deng-chyang Wu (committee member), Po-Lin Kuo (chair).
Subjects/Keywords: β-catenin; Hepatocellular carcinoma; Wnt signaling pathway; Cancer stem cell; LECT2
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Chicago ·
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to Zotero / EndNote / Reference
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APA (6th Edition):
Tai , P. (2014). Therapeutic potential and mechanism of LECT2 for liver cancer. (Thesis). NSYSU. Retrieved from http://etd.lib.nsysu.edu.tw/ETD-db/ETD-search/view_etd?URN=etd-0621114-111413
Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation
Chicago Manual of Style (16th Edition):
Tai , Po-han. “Therapeutic potential and mechanism of LECT2 for liver cancer.” 2014. Thesis, NSYSU. Accessed January 28, 2021.
http://etd.lib.nsysu.edu.tw/ETD-db/ETD-search/view_etd?URN=etd-0621114-111413.
Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation
MLA Handbook (7th Edition):
Tai , Po-han. “Therapeutic potential and mechanism of LECT2 for liver cancer.” 2014. Web. 28 Jan 2021.
Vancouver:
Tai P. Therapeutic potential and mechanism of LECT2 for liver cancer. [Internet] [Thesis]. NSYSU; 2014. [cited 2021 Jan 28].
Available from: http://etd.lib.nsysu.edu.tw/ETD-db/ETD-search/view_etd?URN=etd-0621114-111413.
Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation
Council of Science Editors:
Tai P. Therapeutic potential and mechanism of LECT2 for liver cancer. [Thesis]. NSYSU; 2014. Available from: http://etd.lib.nsysu.edu.tw/ETD-db/ETD-search/view_etd?URN=etd-0621114-111413
Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation

NSYSU
13.
Wu, Ping-Hsuan.
The role of LECT2 in liver carcinogenesis.
Degree: Master, Biological Sciences, 2011, NSYSU
URL: http://etd.lib.nsysu.edu.tw/ETD-db/ETD-search/view_etd?URN=etd-0824111-001511
► Leukocyte cell-derived chemotaxin 2 (LECT2) is first isolated as a 16-kDa secreted protein from cultured fluid of phytohemagglutinin-activated human T-cell leukemia SKW-3 cells. Recently LECT2…
(more)
▼ Leukocyte cell-derived chemotaxin 2 (LECT2) is first isolated as a 16-kDa secreted protein from cultured fluid of phytohemagglutinin-activated human T-cell leukemia SKW-3 cells. Recently LECT2 has shown to be synthesized by human hepatocytes and stimulates the growth of chondrocytes. LECT2 is involved in chemotactic factor to neutrophils and may be associated with rheumatoid arthritis. Besides, LECT2 is evolutionarily conserved and acts as a repressor in the Wnt/β-catenin
signaling pathway. Wnt/β-catenin
signaling is implicated in liver carcinogenesis. However, the exact roles of LECT2 in liver carcinogenesis are not yet well characterized. This study is to investigate the extra roles of LECT2 in Wnt
signaling. Our results showed that adenoviral administration of LECT2 over-expression suppress oncogenic processes such as migration, invasion, proliferation and colony formation, as well as alteration in cell cycle distributions. In animal model significantly suppress liver malignancies in orthotopic Novikoff hepatoma. In conclusion, we show that ad-LECT2 gene delivery attenuated cell carcinogenesis process via downregulated Wnt/β-catenin
signaling in vitro and suppressed tumor growth in vivo. Besides LECT2 over-expression represents a novel therapeutically factor for hepatocelluar carcinoma.
Advisors/Committee Members: Cheng, Jiin-Tsuey (chair), Hu, Tsung-Hui (chair), Tai, Ming-Hong (committee member).
Subjects/Keywords: Wnt pathway; β-catenin; Hepatocellular carcinoma; cellular signaling; LECT2
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❌
APA ·
Chicago ·
MLA ·
Vancouver ·
CSE |
Export
to Zotero / EndNote / Reference
Manager
APA (6th Edition):
Wu, P. (2011). The role of LECT2 in liver carcinogenesis. (Thesis). NSYSU. Retrieved from http://etd.lib.nsysu.edu.tw/ETD-db/ETD-search/view_etd?URN=etd-0824111-001511
Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation
Chicago Manual of Style (16th Edition):
Wu, Ping-Hsuan. “The role of LECT2 in liver carcinogenesis.” 2011. Thesis, NSYSU. Accessed January 28, 2021.
http://etd.lib.nsysu.edu.tw/ETD-db/ETD-search/view_etd?URN=etd-0824111-001511.
Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation
MLA Handbook (7th Edition):
Wu, Ping-Hsuan. “The role of LECT2 in liver carcinogenesis.” 2011. Web. 28 Jan 2021.
Vancouver:
Wu P. The role of LECT2 in liver carcinogenesis. [Internet] [Thesis]. NSYSU; 2011. [cited 2021 Jan 28].
Available from: http://etd.lib.nsysu.edu.tw/ETD-db/ETD-search/view_etd?URN=etd-0824111-001511.
Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation
Council of Science Editors:
Wu P. The role of LECT2 in liver carcinogenesis. [Thesis]. NSYSU; 2011. Available from: http://etd.lib.nsysu.edu.tw/ETD-db/ETD-search/view_etd?URN=etd-0824111-001511
Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation

University of Otago
14.
Kőszegi, Zsombor.
Restorative effect of estrogen on basal forebrain cholinergic neurons
.
Degree: 2011, University of Otago
URL: http://hdl.handle.net/10523/1887
► The basal forebrain cholinergic (BFC) system is one of the most important neurotransmitter systems in the brain. It has received much attention in the past…
(more)
▼ The basal forebrain cholinergic (BFC) system is one of the most important neurotransmitter systems in the brain. It has received much attention in the past two decades, primarily for its role in learning, memory, attention and behavior. The BFC system has also been reported to be particularly vulnerable in neurodegenerative diseases, such as in Alzheimer’s disease (AD). The gonadal steroid, estrogen, is an essential contributor in controlling the vulnerability of the BFC system. Besides its classical or genomic mechanism, estrogen is known to have non-classical actions on intracellular
signaling pathways. In this study, we investigated the ameliorative effects of estrogen treatment and the role of non-classical estrogen actions on BFC neurons in a neurodegenerative mouse model, in vivo.
N-methyl-D-aspartate (NMDA) was injected unilaterally into the substantia innominata - nucleus basalis magnocellularis (SI-NBM) complex of the basal forebrain to elicit cholinergic cell death in the injected area and thus fiber loss in the ipsilateral cortex. An acute treatment of 17β-estradiol (E2) after the NMDA-induced lesion restored the ipsilateral cholinergic fiber density in the cortex in a time- and dose-dependent manner. Conversely, it did not have any effect on the cholinergic cell loss in the SI-NBM. The ameliorative action of E2 on cholinergic fiber loss was detected in both intact and gonadectomized young male and female mice, but not in aged animals. The E2-induced cholinergic fiber density restoration was also absent in neuron-specific estrogen receptor α (ERα) knockout mice. Selective blockade of the mitogen activated protein kinase (MAPK) and protein kinase A (PKA) pathways prevented E2’s ability to restore the cholinergic fiber density. Furthermore, activation of non-classical estrogen
signaling by a non-classical
pathway activator (estren) induced E2-like fiber restoration.
Our findings demonstrate that estrogen restores the cholinergic fiber density in the cortex through a non-classical
signaling mechanism after the loss of subcortical cholinergic input. Similar restorative effects were observed in young animals, irrespective of sex or endogenous estrogen levels. These observations reveal a critical role for non-classical estrogen
signaling via ERα and MAPK-PKA pathways in BFC neurons, in vivo. Taken together, our study discloses important aspects relating to the vulnerability of the BFC system in neurodegenerative processes, such as AD or traumatic brain injury and might shed light on future medical treatments through the use of non-classical estrogen
pathway activators.
Advisors/Committee Members: Ábrahám, István (advisor).
Subjects/Keywords: estrogen;
cholinergic;
basal forebrain;
neurodegeneration;
non-classical;
signaling pathway
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❌
APA ·
Chicago ·
MLA ·
Vancouver ·
CSE |
Export
to Zotero / EndNote / Reference
Manager
APA (6th Edition):
Kőszegi, Z. (2011). Restorative effect of estrogen on basal forebrain cholinergic neurons
. (Doctoral Dissertation). University of Otago. Retrieved from http://hdl.handle.net/10523/1887
Chicago Manual of Style (16th Edition):
Kőszegi, Zsombor. “Restorative effect of estrogen on basal forebrain cholinergic neurons
.” 2011. Doctoral Dissertation, University of Otago. Accessed January 28, 2021.
http://hdl.handle.net/10523/1887.
MLA Handbook (7th Edition):
Kőszegi, Zsombor. “Restorative effect of estrogen on basal forebrain cholinergic neurons
.” 2011. Web. 28 Jan 2021.
Vancouver:
Kőszegi Z. Restorative effect of estrogen on basal forebrain cholinergic neurons
. [Internet] [Doctoral dissertation]. University of Otago; 2011. [cited 2021 Jan 28].
Available from: http://hdl.handle.net/10523/1887.
Council of Science Editors:
Kőszegi Z. Restorative effect of estrogen on basal forebrain cholinergic neurons
. [Doctoral Dissertation]. University of Otago; 2011. Available from: http://hdl.handle.net/10523/1887

Mississippi State University
15.
Song, Jie.
Molecular and proteomic analysis of components involved in abscisic acid (ABA) signaling network.
Degree: PhD, Biochemistry, Molecular Biology, Entomology and Plant Pathology, 2014, Mississippi State University
URL: http://sun.library.msstate.edu/ETD-db/theses/available/etd-10152014-032027/
;
► Abscisic acid is an important plant hormone in the responses to biotic and abiotic stresses, which also regulates various growth and developmental processes in…
(more)
▼ Abscisic acid is an important plant hormone in the responses to biotic and abiotic stresses, which also regulates various growth and developmental processes in plants. Three major components-receptors (PYRs), the PP2C type phosphatases and the SnRK2 subtype kinases form a double negative regulatory system: PYR/PYL/RCARs inhibit the activity of PP2Cs while PP2Cs inhibit that of SnRK2s in ABA
signaling pathway. The results of my studies showed that ABA would directly affect the interaction between SnRK2.2 and ABI1 in absence of PYRs. Furthermore, ABA can inhibit the catalytic activity of the SnRK2.2 kinase. These findings indicated that ABA may directly interact with SnRK2.2.
Posttranslational modifications play a key role in signal transduction. Phosphorylation is the most important posttranscriptional modification in ABA signal transduction. To dissect new components in ABA
signaling network in plants, proteomics studies were carried out in Arabidopsis for identifying ABA- responsive phosphoproteins. Ten phosphoproteins, ATPB, ATPC1, FBA1, CTIMC, GGAT1, GAPC1, GAPC2, GAPA1 and ALDH11A3, were identified by 2-DE proteomic approach
and LC-MS/MS analysis. These proteins are likely to be the potential phosphorylated targets of SnRK2s in ABA
signaling network. Lysine acetylation (LysAc) also emerges as one of the important posttranslational modifications for protein regulation in plants. Eleven lysine acetylated proteins with altered acetylation in response to ABA were identified in Arabidopsis using proteomic approach. The increased LysAc of Rubisco and the decreased Rubisco activity by ABA treatment indicates the acetylation of Rubisco caused by ABA resulted in the inhibition of Rubisco activity.
ABA has also been shown to exist and function in both lower animals and mammalians. The medical application of ABA has become a new area of investigation. To explore the role of protein phosphorylation in ABA-mediated function in mammalians, phosphoproteomic study was conducted in mouse 3T3-L1 cells. Ten phosphoproteins with significant changes in serine/threonine phosphorylation in response to ABA were identified. These results suggest these phosphoproteins are involved in ABA
signaling network in mouse cells. The significance of the function of SFRS1, ANXA1 and Galectin-3 on human diseases indicated that ABA could be a potential treatment for some human diseases, such as cancer.
Advisors/Committee Members: Jiaxu Li (chair), Din-Pow Ma (committee member), Zhaohua Peng (committee member), Daniel G. Peterson (committee member), Scott T. Willard (committee member).
Subjects/Keywords: ABACABA signaling pathway; Arabidopsis; proteomics; phosphorylation; acetylation; 3T3-L1 mouse cells
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❌
APA ·
Chicago ·
MLA ·
Vancouver ·
CSE |
Export
to Zotero / EndNote / Reference
Manager
APA (6th Edition):
Song, J. (2014). Molecular and proteomic analysis of components involved in abscisic acid (ABA) signaling network. (Doctoral Dissertation). Mississippi State University. Retrieved from http://sun.library.msstate.edu/ETD-db/theses/available/etd-10152014-032027/ ;
Chicago Manual of Style (16th Edition):
Song, Jie. “Molecular and proteomic analysis of components involved in abscisic acid (ABA) signaling network.” 2014. Doctoral Dissertation, Mississippi State University. Accessed January 28, 2021.
http://sun.library.msstate.edu/ETD-db/theses/available/etd-10152014-032027/ ;.
MLA Handbook (7th Edition):
Song, Jie. “Molecular and proteomic analysis of components involved in abscisic acid (ABA) signaling network.” 2014. Web. 28 Jan 2021.
Vancouver:
Song J. Molecular and proteomic analysis of components involved in abscisic acid (ABA) signaling network. [Internet] [Doctoral dissertation]. Mississippi State University; 2014. [cited 2021 Jan 28].
Available from: http://sun.library.msstate.edu/ETD-db/theses/available/etd-10152014-032027/ ;.
Council of Science Editors:
Song J. Molecular and proteomic analysis of components involved in abscisic acid (ABA) signaling network. [Doctoral Dissertation]. Mississippi State University; 2014. Available from: http://sun.library.msstate.edu/ETD-db/theses/available/etd-10152014-032027/ ;

University of Alberta
16.
Bostan, Babak.
Predicting homologous signaling pathways using machine
learning.
Degree: MS, Department of Computing Science, 2009, University of Alberta
URL: https://era.library.ualberta.ca/files/765372669
► Understanding biochemical reactions inside cells of individual organisms is a key factor for improving our biological knowledge. Signaling pathways provide a road map for a…
(more)
▼ Understanding biochemical reactions inside cells of
individual organisms is a key factor for improving our biological
knowledge. Signaling pathways provide a road map for a wide range
of these chemical reactions that convert one signal or stimulus
into another. In general, each signaling pathway in a cell involves
many different proteins, each with one or more specific roles that
help to amplify a relatively small stimulus into an effective
response. Since proteins are essential components of a cell’s
activities, it is important to understand how they work – and in
particular, to determine which of specie’s proteins participate in
each role. Experimentally determining this mapping of proteins to
roles is difficult and time consuming. Fortunately, many individual
pathways have been annotated for some species, and the pathways of
other species can often be inferred using protein homology and the
protein properties.
Subjects/Keywords: signaling pathway; machine learning; prediction; support vector machine
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❌
APA ·
Chicago ·
MLA ·
Vancouver ·
CSE |
Export
to Zotero / EndNote / Reference
Manager
APA (6th Edition):
Bostan, B. (2009). Predicting homologous signaling pathways using machine
learning. (Masters Thesis). University of Alberta. Retrieved from https://era.library.ualberta.ca/files/765372669
Chicago Manual of Style (16th Edition):
Bostan, Babak. “Predicting homologous signaling pathways using machine
learning.” 2009. Masters Thesis, University of Alberta. Accessed January 28, 2021.
https://era.library.ualberta.ca/files/765372669.
MLA Handbook (7th Edition):
Bostan, Babak. “Predicting homologous signaling pathways using machine
learning.” 2009. Web. 28 Jan 2021.
Vancouver:
Bostan B. Predicting homologous signaling pathways using machine
learning. [Internet] [Masters thesis]. University of Alberta; 2009. [cited 2021 Jan 28].
Available from: https://era.library.ualberta.ca/files/765372669.
Council of Science Editors:
Bostan B. Predicting homologous signaling pathways using machine
learning. [Masters Thesis]. University of Alberta; 2009. Available from: https://era.library.ualberta.ca/files/765372669

McMaster University
17.
Law, Fiona.
Characterization of RanBPM in Drosophila melanogaster.
Degree: MSc, 2011, McMaster University
URL: http://hdl.handle.net/11375/11477
► RanBPM is a conserved putative scaffold protein of unknown function. Loss-of-function in RanBPM leads to pleiotropic phenotypes such as reduced locomotion, decreased size and…
(more)
▼ RanBPM is a conserved putative scaffold protein of unknown function. Loss-of-function in RanBPM leads to pleiotropic phenotypes such as reduced locomotion, decreased size and larval lethality in the Drosophila melanogaster. dRanBPM mutants have decreased branching and boutons at the neuromuscular junction, which may contribute to their locomotory defect. To investigate if dRanBPM is involved in controlling synaptic architecture at the neuromuscular junction, levels of two cytoskeletal proteins, Futsch and profilin, were assessed in dRanBPM mutants. Due to time constraints, immunoblots for Futsch were not fully optimized for protein measurement. Immunoblots for profilin, on the other hand, were successfully carried out. However, results from the reproduction of a blot demonstrating the negative regulation of Drosophila FMRP on profilin did not agree with that of the literature. In addition, results from an epistatic experiment demonstrated that profilin levels were not affected in FMRP deficient flies when compared to those with additional decrease in dRanBPM function. Targeted expression of dRanBPM to neurosecretory cells is able to rescue size and lethality of dRanBPM mutants, suggesting a common pathway through which both phenotypes operate is disrupted in these mutants. Activation of the insulin signaling pathway was indeed found to be downregulated in dRanBPM mutants. A longevity assay was alternatively carried out to demonstrate decreased insulin pathway activation in dRanBPM mutants. Unfortunately, due to inappropriate controls used for this experiment, no conclusive points can be made. Together, these findings contribute to the knowledge that RanBPM plays and to designing future experiments to test for RanBPM function.
Master of Science (MSc)
Advisors/Committee Members: Campos, Ana R., Jacobs, Roger, Gillespie, Deda, Neuroscience.
Subjects/Keywords: Drosophila melanogaster; RanBPM; NMJ; insulin signaling pathway; Developmental Biology; Developmental Biology
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❌
APA ·
Chicago ·
MLA ·
Vancouver ·
CSE |
Export
to Zotero / EndNote / Reference
Manager
APA (6th Edition):
Law, F. (2011). Characterization of RanBPM in Drosophila melanogaster. (Masters Thesis). McMaster University. Retrieved from http://hdl.handle.net/11375/11477
Chicago Manual of Style (16th Edition):
Law, Fiona. “Characterization of RanBPM in Drosophila melanogaster.” 2011. Masters Thesis, McMaster University. Accessed January 28, 2021.
http://hdl.handle.net/11375/11477.
MLA Handbook (7th Edition):
Law, Fiona. “Characterization of RanBPM in Drosophila melanogaster.” 2011. Web. 28 Jan 2021.
Vancouver:
Law F. Characterization of RanBPM in Drosophila melanogaster. [Internet] [Masters thesis]. McMaster University; 2011. [cited 2021 Jan 28].
Available from: http://hdl.handle.net/11375/11477.
Council of Science Editors:
Law F. Characterization of RanBPM in Drosophila melanogaster. [Masters Thesis]. McMaster University; 2011. Available from: http://hdl.handle.net/11375/11477

University of Texas Southwestern Medical Center
18.
Kulak, Ozlem.
Chemical Disruption of Wnt Signaling and Telomere Length Maintenance.
Degree: 2015, University of Texas Southwestern Medical Center
URL: http://hdl.handle.net/2152.5/4110
► Pages xvii-xviii of the dissertation are incorrectly numbered as pages xvi-xvii.
A nearly universal feature of colorectal cancer (CRC) incidents is the presence of genetic…
(more)
▼ Pages xvii-xviii of the dissertation are incorrectly numbered as pages xvi-xvii.
A nearly universal feature of colorectal cancer (CRC) incidents is the presence of genetic alterations that promote deviant activation of the TCF/LEF transcriptional regulators. The TCF/LEF proteins control the transcriptional output of intercellular signaling mediated by the Wnt family of secreted ligands. Several chemical screening efforts devoted to disrupting deviant TCF/LEF activity have converged on two vulnerabilities in the Wnt pathway – the poly-ADP-ribose polymerases, Tankyrase 1 and 2 (Tnks1 and 2) that control the threshold response levels to Wnt ligands, and the Wnt acyltransferase Porcupine that provides an essential fatty acyl adduct to all nineteen Wnt ligands. My thesis focuses on the chemical biology of one of these strategies – the Tnks enzymes – with the goal of understanding the strengths and limitations of drugging the Tnks proteins for achieving therapeutic goals in regenerative medicine and cancer. Given the previously assigned role of Tnks enzymes in telomere maintenance, I have also devoted considerable effort to understanding the cell biological effects of disrupting Tnks activity on telomere integrity. Finally, I mined a high-confidence collection of Wnt pathway inhibitors with previously unidentified mechanisms of action to identify novel small molecules that directly target the TCF/LEF transcriptional apparatus. This effort netted a chemical approach for disabling deviant transcriptional activity in CRC that is distinct from the one afforded by Tnks and Porcn inhibitors. Taken together, my thesis establishes a chemical toolkit for interrogating the inner workings of Wnt-mediated signaling and also reveals new avenues for disabling deviant Wnt responses in cancer and normal Wnt responses in tissue engineering.
Advisors/Committee Members: White, Michael A., Minna, John D., Abrams, John M., Lum, Lawrence.
Subjects/Keywords: Enzyme Inhibitors; Tankyrases; Telomere Shortening; Wnt Signaling Pathway
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❌
APA ·
Chicago ·
MLA ·
Vancouver ·
CSE |
Export
to Zotero / EndNote / Reference
Manager
APA (6th Edition):
Kulak, O. (2015). Chemical Disruption of Wnt Signaling and Telomere Length Maintenance. (Thesis). University of Texas Southwestern Medical Center. Retrieved from http://hdl.handle.net/2152.5/4110
Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation
Chicago Manual of Style (16th Edition):
Kulak, Ozlem. “Chemical Disruption of Wnt Signaling and Telomere Length Maintenance.” 2015. Thesis, University of Texas Southwestern Medical Center. Accessed January 28, 2021.
http://hdl.handle.net/2152.5/4110.
Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation
MLA Handbook (7th Edition):
Kulak, Ozlem. “Chemical Disruption of Wnt Signaling and Telomere Length Maintenance.” 2015. Web. 28 Jan 2021.
Vancouver:
Kulak O. Chemical Disruption of Wnt Signaling and Telomere Length Maintenance. [Internet] [Thesis]. University of Texas Southwestern Medical Center; 2015. [cited 2021 Jan 28].
Available from: http://hdl.handle.net/2152.5/4110.
Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation
Council of Science Editors:
Kulak O. Chemical Disruption of Wnt Signaling and Telomere Length Maintenance. [Thesis]. University of Texas Southwestern Medical Center; 2015. Available from: http://hdl.handle.net/2152.5/4110
Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation

Wayne State University
19.
Donato, Michele.
Systems Biology Approaches For The Analysis Of High-Throughput Biological Data.
Degree: PhD, Computer Science, 2016, Wayne State University
URL: https://digitalcommons.wayne.edu/oa_dissertations/1396
► The identification of biological processes involved with a certain phenotype, such as a disease or drug treatment, is the goal of the majority of…
(more)
▼ The identification of biological processes involved with a certain phenotype, such as a disease or drug treatment, is the goal of the majority of life sciences experiments.
Pathway analysis methods are used to interpret high-throughput biological data to identify such processes by incorporating information on biological systems to translate data into biological knowledge.
Although widely used, current methods share a number of limitations.
First, they do not take into account the individual contribution of each gene to the phenotype in analysis.
Second, most of the methods include parameters of difficult interpretation, often arbitrarily set.
Third, the results of all methods are affected by the fact that pathways are not independent entities, but communicate with each other by a phenomenon referred to as crosstalk.
Crosstalk effects heavily influence the results of
pathway analysis methods, adding a number of false positives and false negatives, making them difficult to interpret.
We developed methods that address these limitations by i) allowing for the incorporation of individual gene contributions, ii) developing objective methods for the estimation of parameters of
pathway analysis methods, and iii) developing an approach able to detect, quantify, and correct for crosstalk effects.
We show on a number of real and simulated data that our approaches increase specificity and sensitivity of
pathway analysis, allowing for a more effective identification of the processes and mechanisms underlying biological phenomena.
Advisors/Committee Members: Sorin Draghici.
Subjects/Keywords: Impact Analysis; Microarrays; Pathway Analysis; Signaling Pathways; Systems Biology; Bioinformatics
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❌
APA ·
Chicago ·
MLA ·
Vancouver ·
CSE |
Export
to Zotero / EndNote / Reference
Manager
APA (6th Edition):
Donato, M. (2016). Systems Biology Approaches For The Analysis Of High-Throughput Biological Data. (Doctoral Dissertation). Wayne State University. Retrieved from https://digitalcommons.wayne.edu/oa_dissertations/1396
Chicago Manual of Style (16th Edition):
Donato, Michele. “Systems Biology Approaches For The Analysis Of High-Throughput Biological Data.” 2016. Doctoral Dissertation, Wayne State University. Accessed January 28, 2021.
https://digitalcommons.wayne.edu/oa_dissertations/1396.
MLA Handbook (7th Edition):
Donato, Michele. “Systems Biology Approaches For The Analysis Of High-Throughput Biological Data.” 2016. Web. 28 Jan 2021.
Vancouver:
Donato M. Systems Biology Approaches For The Analysis Of High-Throughput Biological Data. [Internet] [Doctoral dissertation]. Wayne State University; 2016. [cited 2021 Jan 28].
Available from: https://digitalcommons.wayne.edu/oa_dissertations/1396.
Council of Science Editors:
Donato M. Systems Biology Approaches For The Analysis Of High-Throughput Biological Data. [Doctoral Dissertation]. Wayne State University; 2016. Available from: https://digitalcommons.wayne.edu/oa_dissertations/1396

University of Adelaide
20.
Alanazi, Ibrahim Oqla.
Understanding the apoptotic signaling pathways in breast cancer using microarrays, proteomics and bioinformatics.
Degree: 2014, University of Adelaide
URL: http://hdl.handle.net/2440/92350
► Breast cancer is one of the most common causes of cancer death to women worldwide. In this study A431 cells, derived from epidermoid carcinoma, are…
(more)
▼ Breast cancer is one of the most common causes of cancer death to women worldwide. In this study A431 cells, derived from epidermoid carcinoma, are used as a model to study breast cancer. This cell line over-expresses the Epidermal Growth Factor Receptor (EGFR/HER1) and when treated with a high dose of EGF will undergo apoptosis via the activation of EGFR/HER1
signaling. However, little work has been conducted to identify the underlying molecular mechanisms. The limited available data implicates components of the interferon response
pathway as mediators of the apoptotic signal in cancer cells. The genetic network through which EGFR/HER1 can induce apoptosis is not known at the present time. With understanding of the genetic regulatory hierarchy and the molecular mechanisms linking EGFR/HER1
signaling and apoptosis, better drug targets that might regulate apoptosis in cancers that over express HERs can be identified. This thesis focuses on the hypothesis that an apoptosis specific signalling cascade can be triggered by HERs in A431cells. Activation of HER receptors has led us to identify downstream components by global analyses of gene expression and associated regulatory miRNAs and protein levels using microarray and proteomics platforms. A high dose of EGF leads to the induction of apoptosis in A431 cells by activating a number of pathways, which are known to promote apoptosis. These include the STAT
pathway and downstream components including cytokines and suppressors of cytokine signalling, cleavage of serpinb1 into L-DNAaseII and down regulation of mutant TP53, which may perturb the cytoskeleton and cell adhesion proteins. Furthermore, our data showed that gene expression and proteomic data were quite different, with very little overlap in terms of transcripts and proteins. Therefore, we considered that post-transcriptional regulation might be crucial. MicroRNAs are known to be important post-transcriptional regulators; as a result, we sought to identify potential regulatory miRNAs with respect to induction of cell death by EGF. We identified novel interaction regulatory networks based on the crosstalk between miRNAs and mRNA/protein that resulted in the induction of apoptosis in A431 cells. We also identified a number of miRNAs that may play an important role in the regulation of apoptosis in A431 cells after EGF treatment. We have used bioinformatics databases and in silico analysis tools to create a comprehensive catalogue of genes/proteins that may induce apoptosis in A431 cell after EGF treatment. We have shown that using various complimentary platforms including gene expression, miRNA expression, proteomics, and network prediction to analyse the induction of apoptosis in treated A431 cells, we have achieved a greater understanding of the molecular mechanisms at work. This in turn may provide strategies for combined therapies and/or predict novel potential mechanisms/targets for chemotherapy aimed at inducing cell death in tumor cells.
Advisors/Committee Members: Adelson, David Louis (advisor), Hoffmann, Peter (advisor), School of Molecular and Biomedical Science (school).
Subjects/Keywords: breast cancer; apoptotic signaling pathway; microarray; proteomics; bioinformatics
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❌
APA ·
Chicago ·
MLA ·
Vancouver ·
CSE |
Export
to Zotero / EndNote / Reference
Manager
APA (6th Edition):
Alanazi, I. O. (2014). Understanding the apoptotic signaling pathways in breast cancer using microarrays, proteomics and bioinformatics. (Thesis). University of Adelaide. Retrieved from http://hdl.handle.net/2440/92350
Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation
Chicago Manual of Style (16th Edition):
Alanazi, Ibrahim Oqla. “Understanding the apoptotic signaling pathways in breast cancer using microarrays, proteomics and bioinformatics.” 2014. Thesis, University of Adelaide. Accessed January 28, 2021.
http://hdl.handle.net/2440/92350.
Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation
MLA Handbook (7th Edition):
Alanazi, Ibrahim Oqla. “Understanding the apoptotic signaling pathways in breast cancer using microarrays, proteomics and bioinformatics.” 2014. Web. 28 Jan 2021.
Vancouver:
Alanazi IO. Understanding the apoptotic signaling pathways in breast cancer using microarrays, proteomics and bioinformatics. [Internet] [Thesis]. University of Adelaide; 2014. [cited 2021 Jan 28].
Available from: http://hdl.handle.net/2440/92350.
Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation
Council of Science Editors:
Alanazi IO. Understanding the apoptotic signaling pathways in breast cancer using microarrays, proteomics and bioinformatics. [Thesis]. University of Adelaide; 2014. Available from: http://hdl.handle.net/2440/92350
Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation

University of Miami
21.
Sun-Suslow, Ni.
The Oxytocin Receptor as an Acute Phase Protein and its Signaling Pathways in Response to Inflammation.
Degree: MS, Psychology (Arts and Sciences), 2015, University of Miami
URL: https://scholarlyrepository.miami.edu/oa_theses/566
► Social environment influences the progression of atherosclerosis, a chronic inflammatory process. Oxytocin (OT) has been associated with pro-social behavior; however, plasma OT levels are not…
(more)
▼ Social environment influences the progression of atherosclerosis, a chronic inflammatory process. Oxytocin (OT) has been associated with pro-social behavior; however, plasma OT levels are not elevated in a pro-social environment in animal models of disease. Infusion of exogenous OT in these disease models attenuates inflammation and arterial plaque, which raises the possibility that OT’s anti-inflammatory effects may be regulated at the level of the OT receptor (OTR) rather than by changes in plasma OT titers as a function of social environment. The current study investigated OTR and
signaling pathways in human macrophages to understand how inflammation affects the OT/OTR system at the molecular level. We hypothesized that OTR is an acute phase protein, whose expression is increased during the inflammatory response though a nuclear factor κB (NF-κB) mediated
pathway. We further evaluated whether inflammation alters OTR
signaling pathways, which can occur through either the phosphatidylinositol (PI) (Gαq/11) or the cAMP (Gαs) pathways. Inflammation was induced by treating THP-1 macrophages with lipopolysaccharide (LPS) and monitored by expression of the inflammatory cytokine, interleukin-6 (IL-6). Cells were treated with exogenous IL-6 and NF- κB inhibitor and OTR gene expression was measured by RT-PCR. OTR
signaling was evaluated by phosphorylation of downstream targets, ERK1/2 from the PI
pathway, and CREB from the cAMP
pathway, by immunoblotting after LPS and OT treatments. Induction of inflammation by LPS stimulation of macrophages significantly up-regulated OTR transcription 150-fold relative to control cell, however IL-6 had no effect on OTR expression. Blocking NF-κB activation prevented the increase in OTR transcription. Our data also confirmed OT-treatment of macrophages inhibits LPS stimulated IL-6 secretion. Incubation of LPS-treated cells with OT caused increased phosphorylation of ERK1/2 and CREB. Individual blocking of Gαq/11 and Gαs RNA resulted in a loss of OT’s ability to down-regulate IL-6. Together these results demonstrate receptor function through both Gαq/11 and Gαs
signaling pathways during inflammation. OTR is an acute phase protein, whose expression can be regulated by NF-κB. Current data suggest both the PI and cAMP
signaling pathways are activated by OTR during an inflammatory response and that the receptor may be responsible for attenuating the inflammatory response of the macrophage. This study is the first to demonstrate OT's effect on the non-conventional cAMP
signaling pathway in this cell line and the importance of OTR in regulating inflammation. This suggests OTR regulation/function should be considered in addition to measurement of plasma OT.
Advisors/Committee Members: Philip M. McCabe, Armando J. Mendez, Neil Schneiderman.
Subjects/Keywords: Oxytocin Receptor; Oxytocin; Inflammation; Acute Phase Protein; Signaling Pathway
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❌
APA ·
Chicago ·
MLA ·
Vancouver ·
CSE |
Export
to Zotero / EndNote / Reference
Manager
APA (6th Edition):
Sun-Suslow, N. (2015). The Oxytocin Receptor as an Acute Phase Protein and its Signaling Pathways in Response to Inflammation. (Thesis). University of Miami. Retrieved from https://scholarlyrepository.miami.edu/oa_theses/566
Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation
Chicago Manual of Style (16th Edition):
Sun-Suslow, Ni. “The Oxytocin Receptor as an Acute Phase Protein and its Signaling Pathways in Response to Inflammation.” 2015. Thesis, University of Miami. Accessed January 28, 2021.
https://scholarlyrepository.miami.edu/oa_theses/566.
Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation
MLA Handbook (7th Edition):
Sun-Suslow, Ni. “The Oxytocin Receptor as an Acute Phase Protein and its Signaling Pathways in Response to Inflammation.” 2015. Web. 28 Jan 2021.
Vancouver:
Sun-Suslow N. The Oxytocin Receptor as an Acute Phase Protein and its Signaling Pathways in Response to Inflammation. [Internet] [Thesis]. University of Miami; 2015. [cited 2021 Jan 28].
Available from: https://scholarlyrepository.miami.edu/oa_theses/566.
Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation
Council of Science Editors:
Sun-Suslow N. The Oxytocin Receptor as an Acute Phase Protein and its Signaling Pathways in Response to Inflammation. [Thesis]. University of Miami; 2015. Available from: https://scholarlyrepository.miami.edu/oa_theses/566
Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation

University of Toronto
22.
Martin, Tonya.
Glypican-3 Stimulates the WNT Signaling Pathway by Facilitating/Stabilizing the Interaction of WNT LIigand and Frizzled Receptor.
Degree: 2010, University of Toronto
URL: http://hdl.handle.net/1807/25850
► Glypican-3 (GPC3) belongs to a family of cell surface proteoglycans. GPC3 regulates the activity of several morphogens and growth factors that play critical roles during…
(more)
▼ Glypican-3 (GPC3) belongs to a family of cell surface proteoglycans. GPC3 regulates the activity of several morphogens and growth factors that play critical roles during development. Disrupting the function of GPC3 leads to disease, including the overgrowth disease Simpson Golabi Behmel Syndrome (SGBS) and Cancer. Previous work has shown that GPC3 is over expressed in Hepatocellular Carcinoma (HCC), and that HCC proliferation is stimulated through GPC3 mediated activation of the Wnt signaling pathway. Glypicans are known to regulate Wnt signaling in a variety of model organisms including Drosophila and mouse.
This work investigates the hypothesis that GPC3 stimulates Wnt signaling by facilitating/stabilizing the interaction between Wnt and its receptor Frizzled (Fzd). Consistent with this hypothesis, we found that GPC3 is able to bind both Wnt and Fzd. The binding of GPC3 to Fzd is mediated by the GPC3 glycosaminoglycan chains and by the cysteine rich domain of Fzd.
MAST
Advisors/Committee Members: Filmus, Jorge, Medical Biophysics.
Subjects/Keywords: Glypican-3; Glypicans; Frizzled; Wnt pathway; Cell Signaling; 0379; 0307
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❌
APA ·
Chicago ·
MLA ·
Vancouver ·
CSE |
Export
to Zotero / EndNote / Reference
Manager
APA (6th Edition):
Martin, T. (2010). Glypican-3 Stimulates the WNT Signaling Pathway by Facilitating/Stabilizing the Interaction of WNT LIigand and Frizzled Receptor. (Masters Thesis). University of Toronto. Retrieved from http://hdl.handle.net/1807/25850
Chicago Manual of Style (16th Edition):
Martin, Tonya. “Glypican-3 Stimulates the WNT Signaling Pathway by Facilitating/Stabilizing the Interaction of WNT LIigand and Frizzled Receptor.” 2010. Masters Thesis, University of Toronto. Accessed January 28, 2021.
http://hdl.handle.net/1807/25850.
MLA Handbook (7th Edition):
Martin, Tonya. “Glypican-3 Stimulates the WNT Signaling Pathway by Facilitating/Stabilizing the Interaction of WNT LIigand and Frizzled Receptor.” 2010. Web. 28 Jan 2021.
Vancouver:
Martin T. Glypican-3 Stimulates the WNT Signaling Pathway by Facilitating/Stabilizing the Interaction of WNT LIigand and Frizzled Receptor. [Internet] [Masters thesis]. University of Toronto; 2010. [cited 2021 Jan 28].
Available from: http://hdl.handle.net/1807/25850.
Council of Science Editors:
Martin T. Glypican-3 Stimulates the WNT Signaling Pathway by Facilitating/Stabilizing the Interaction of WNT LIigand and Frizzled Receptor. [Masters Thesis]. University of Toronto; 2010. Available from: http://hdl.handle.net/1807/25850

Univerzitet u Beogradu
23.
Popić, Jelena. 1978-.
Uticaj propofola na signalni put neurotrofina u prednjem
mozgu pacova starih 14 dana.
Degree: Biološki fakultet, 2012, Univerzitet u Beogradu
URL: https://fedorabg.bg.ac.rs/fedora/get/o:2344/bdef:Content/get
► Biologija - molekularna neurobiologija / Biology - molecular neurobiology
Neurotrofini čine familiju signalnih molekula sa brojnim uticajima na rast, preživljavanje, diferencijaciju i sinaptičku plastičnost postmitotskih…
(more)
▼ Biologija - molekularna neurobiologija / Biology -
molecular neurobiology
Neurotrofini čine familiju signalnih molekula sa
brojnim uticajima na rast, preživljavanje, diferencijaciju i
sinaptičku plastičnost postmitotskih neurona, kako u adultnom
mozgu, tako i u mozgu tokom razvića. Neurotrofini (BDNF, NGF) se sa
određenim afinitetom vezuju za Trk receptore, iniciraju njihovu
dimerizaciju i autofosforilaciju i na taj način se pokreće
aktivacija signalnih puteva kao što su PI3K/Akt i MAPK/ERK. Akt i
ERK kinaze imaju ključne regulatorne uloge u mozgu u procesima kao
što su neuronalna proliferacija, diferencijacija, razviće,
migracija, preživljavanje i dugotrajna sinaptička plastičnost.
Aktivan (fosforilisan) Akt štiti ćeliju od apoptoze tako što
stimuliše ekspresiju proteina koji favorizuju preživljavanje ćelija
i sa druge strane inhibira egzekutorske kaspaze. Aktivacija ERK1/2
kinaze pomoviše preživljavanje, međutim u određenim uslovima ERK1/2
može imati i pro-apoptotske odlike. S obzirom da je uloga
neurotrofina u neurotoksičnosti koja je indukovana anestezijom
tokom ranog postnatalnog razvića pokazana u nekoliko studija, cilj
ove doktorske disertacije je bio da se na molekulskom nivou
ispitaju promene u signalnom putu neurotrofina koje nastaju u kori
i talamusu postnatalnih pacova nakon primene anestetske doze
propofola, kao i da se utvrdi potencijal tretmana da indukuje
ćelijsku smrt i/ili promene u sinaptičkoj plastičnosti. Nakon
jednokratne primene propofola (25 mg/kg i.p.) ispitana je vremenska
i prostorna ekspresija neurotrofina BDNF i NGF, njihovih
aktiviranih receptora TrkB, TrkA i p75 receptora, kao i nishodnih
kinaza Akt i ERK kod 14 dana starih (PND14) pacova. Ispitan je i
potencijal propofolskog tretman da indukuje ćelijsku smrt,
praćenjem ekspresije TNF-α, TNFR1, aktivnog fragmenta kaspaze-3,
njegovog inhibitora XIAP proteina, kao i transkripcionog faktora
NFκB. Finalno je ispitivan potencijal propofolskog tretmana da
indukuje promene u ekspresiji markera sinaptičke plastičnosti
(MAP-2, drebrina, GAP-43, sinaptofizina, sinukleina-1 i
N-kadherina). Promene su praćene u kori i talamusu kao primarnim
ciljevima dejstva anestetskog delovanja. Primenom sledećih metoda
Western blot analize, RT- i PCR-a u realnom vremenu ispitivane su
promene u ekspresiji ciljnih proteina i iRNK, a primenom Fluoro-žad
B histološkog bojenja analizirana je pojava neurona u
degeneraciji...
Advisors/Committee Members: Kanazir, Selma.
Subjects/Keywords: Propofol; cortex; thalamus; postnatal development;
neurotrophic signaling pathway; neuroapoptosis; synaptic
plasticity
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❌
APA ·
Chicago ·
MLA ·
Vancouver ·
CSE |
Export
to Zotero / EndNote / Reference
Manager
APA (6th Edition):
Popić, J. 1. (2012). Uticaj propofola na signalni put neurotrofina u prednjem
mozgu pacova starih 14 dana. (Thesis). Univerzitet u Beogradu. Retrieved from https://fedorabg.bg.ac.rs/fedora/get/o:2344/bdef:Content/get
Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation
Chicago Manual of Style (16th Edition):
Popić, Jelena 1978-. “Uticaj propofola na signalni put neurotrofina u prednjem
mozgu pacova starih 14 dana.” 2012. Thesis, Univerzitet u Beogradu. Accessed January 28, 2021.
https://fedorabg.bg.ac.rs/fedora/get/o:2344/bdef:Content/get.
Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation
MLA Handbook (7th Edition):
Popić, Jelena 1978-. “Uticaj propofola na signalni put neurotrofina u prednjem
mozgu pacova starih 14 dana.” 2012. Web. 28 Jan 2021.
Vancouver:
Popić J1. Uticaj propofola na signalni put neurotrofina u prednjem
mozgu pacova starih 14 dana. [Internet] [Thesis]. Univerzitet u Beogradu; 2012. [cited 2021 Jan 28].
Available from: https://fedorabg.bg.ac.rs/fedora/get/o:2344/bdef:Content/get.
Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation
Council of Science Editors:
Popić J1. Uticaj propofola na signalni put neurotrofina u prednjem
mozgu pacova starih 14 dana. [Thesis]. Univerzitet u Beogradu; 2012. Available from: https://fedorabg.bg.ac.rs/fedora/get/o:2344/bdef:Content/get
Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation

Univerzitet u Beogradu
24.
Milivojević, Milena C., 1979-.
Uloga Sonic Hedgehog signalnog puta u regulaciji
ekspresije SOX18 gena u HeLa ćelijama, kao model sistemu karcinoma
grlića materice.
Degree: Biološki fakultet, 2016, Univerzitet u Beogradu
URL: https://fedorabg.bg.ac.rs/fedora/get/o:10796/bdef:Content/get
► Biologija - Molekularna biologija / Biology - Molecular biology
Sonic Hedgehog (SHH) signalni put ima važnu ulogu u procesima koji se odvijaju tokom embrionalnog razvića…
(more)
▼ Biologija - Molekularna biologija / Biology -
Molecular biology
Sonic Hedgehog (SHH) signalni put ima važnu ulogu u
procesima koji se odvijaju tokom embrionalnog razvića u kojima
kontroliše proliferaciju i diferencijaciju ćelija i učestvuje u
održavanju polarnosti tkiva. Poslednjih godina mnogobrojni
literaturni podaci pokazuju da promena u regulaciji SHH signalnog
puta dovodi do nastanka i progresije različitih vrsta tumora kod
čoveka. SHH signalni put je povezan sa meduloblastomom, leukemijom,
karcinomom bazalnih ćelija, tumorima pluća, prostate, pancreasa,
dojke i jajnika. Takođe, povećana ekspresija komponenti SHH
signalnog puta je primećena u premalignim lezijama i ćelijama
karcinoma grlića materice. SOX18 gen pripada familiji SOX gena koji
kodiraju transkripcione faktore uključene u kontrolu različitih
procesa tokom embrionalnog razvića. SOX18 protein ima važnu ulogu u
razviću vaskularnog sistema kao i u adultnoj neovaskularizaciji.
Uloga SOX18 proteina u vaskularnom razviću otkrivena je na osnovu
poremećaja u razvoju vaskularnog sistema koji su uočeni kod
prirodnih mutanata miša i čoveka. Osim toga, kod adultnog organizma
SOX18 protein učestvuje u regulaciji angiogeneze i limfangiogeneze
kako u fiziološkim stanjima organizma, tako i tokom patofizioloških
promena kao što su zarastanje rana i tumorska angiogeneza. Takođe,
pokazano je da se inhibicijom SOX18 funkcije utiče na
limfangiogenezu čime se sprečava metastaza ćelija tumora. Najnoviji
podaci pokazuju da je ekspresija SOX18 gena, detektovana u ćelijama
invazivnog karcinoma dojke i tumora jajnika, a nivo ekspresije je u
direktnoj korelaciji sa stadijumom tumora i može predstavljati
prognostički marker. Predmet istraživanja prikazanog u ovom radu je
bila analiza uloge SHH signalnog puta u regulaciji ekspresije SOX18
gena u HeLa ćelijama, in vitro model sistemu karcinoma grlića
materice. Prvo je analizirana uloga GLI regulatornih proteina,
finalnih efektora SHH signalne kaskade, u regulaciji transkripcije
SOX18 gena. Prikazani rezultati su pokazali da su GLI1 i GLI2
pozitivni regulatori promotorske aktivnosti SOX18 gena kao i da
povećavaju endogenu ekspresiju SOX18 gena, dok GLI3 transkripcioni
faktor nije uticao na aktivnost SOX18 promotorskog konstrukta niti
na nivo endogene ekspresije SOX18 gena u HeLa
ćelijama...
Advisors/Committee Members: Petrović, Isidora.
Subjects/Keywords: SHH signaling pathway; SOX18; transcription factor;
transcription regulation; migration; proliferation
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❌
APA ·
Chicago ·
MLA ·
Vancouver ·
CSE |
Export
to Zotero / EndNote / Reference
Manager
APA (6th Edition):
Milivojević, Milena C., 1. (2016). Uloga Sonic Hedgehog signalnog puta u regulaciji
ekspresije SOX18 gena u HeLa ćelijama, kao model sistemu karcinoma
grlića materice. (Thesis). Univerzitet u Beogradu. Retrieved from https://fedorabg.bg.ac.rs/fedora/get/o:10796/bdef:Content/get
Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation
Chicago Manual of Style (16th Edition):
Milivojević, Milena C., 1979-. “Uloga Sonic Hedgehog signalnog puta u regulaciji
ekspresije SOX18 gena u HeLa ćelijama, kao model sistemu karcinoma
grlića materice.” 2016. Thesis, Univerzitet u Beogradu. Accessed January 28, 2021.
https://fedorabg.bg.ac.rs/fedora/get/o:10796/bdef:Content/get.
Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation
MLA Handbook (7th Edition):
Milivojević, Milena C., 1979-. “Uloga Sonic Hedgehog signalnog puta u regulaciji
ekspresije SOX18 gena u HeLa ćelijama, kao model sistemu karcinoma
grlića materice.” 2016. Web. 28 Jan 2021.
Vancouver:
Milivojević, Milena C. 1. Uloga Sonic Hedgehog signalnog puta u regulaciji
ekspresije SOX18 gena u HeLa ćelijama, kao model sistemu karcinoma
grlića materice. [Internet] [Thesis]. Univerzitet u Beogradu; 2016. [cited 2021 Jan 28].
Available from: https://fedorabg.bg.ac.rs/fedora/get/o:10796/bdef:Content/get.
Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation
Council of Science Editors:
Milivojević, Milena C. 1. Uloga Sonic Hedgehog signalnog puta u regulaciji
ekspresije SOX18 gena u HeLa ćelijama, kao model sistemu karcinoma
grlića materice. [Thesis]. Univerzitet u Beogradu; 2016. Available from: https://fedorabg.bg.ac.rs/fedora/get/o:10796/bdef:Content/get
Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation

University of Washington
25.
Fagnan, Erin.
Mechanisms for Scaffold-Mediated Regulation of Kinase Activity in the Wnt Signaling Pathway.
Degree: PhD, 2019, University of Washington
URL: http://hdl.handle.net/1773/44746
► Cellular signaling is a complex process involving numerous pathways. Many of these pathways are connected through shared proteins, creating branch points that may result in…
(more)
▼ Cellular
signaling is a complex process involving numerous pathways. Many of these pathways are connected through shared proteins, creating branch points that may result in crosstalk between pathways. It is not fully understood how protein activity can be regulated by a variety of different upstream signals and still maintain specificity. Scaffold proteins may act as a solution to this specificity issue by physically assembling
signaling proteins within a specific
pathway, such as a MAPK cascade. There are many models for how scaffold proteins regulate protein activity, all of which are based on the idea that scaffold proteins increase specificity by increasing reaction rates for the proteins they bring together. Even though this idea has laid the foundation for many studies in the
signaling field, we still lack a thorough kinetic analysis of scaffold function and its effect on specificity. In order to determine if scaffold proteins actually increase reaction rates as a mechanism for specificity, we measured GSK3β reaction rates with several substrates in a minimal, biochemically reconstituted system of the Wnt
signaling network. We found that the Wnt scaffold Axin produces a modest, 2-fold enhancement of the rate of phosphorylation of the Wnt substrate β-catenin. Surprisingly, we found that Axin significantly slows the rate of phosphorylation of a non-Wnt substrate. Together, these data suggest that Axin alone is not sufficient to accelerate a specific kinase-substrate reaction. Instead, Axin can promote
signaling specificity by suppressing kinase reactions with competing, non-Wnt
pathway targets. Further, these newly identified properties of Axin reinforce an emerging trend that scaffold proteins can regulate kinase activity through a diverse set of mechanisms.
Advisors/Committee Members: Zalatan, Jesse (advisor).
Subjects/Keywords: Axin; Cell Signaling; GSK3; Scaffold Proteins; Wnt pathway; Chemistry; Biochemistry; Chemistry
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❌
APA ·
Chicago ·
MLA ·
Vancouver ·
CSE |
Export
to Zotero / EndNote / Reference
Manager
APA (6th Edition):
Fagnan, E. (2019). Mechanisms for Scaffold-Mediated Regulation of Kinase Activity in the Wnt Signaling Pathway. (Doctoral Dissertation). University of Washington. Retrieved from http://hdl.handle.net/1773/44746
Chicago Manual of Style (16th Edition):
Fagnan, Erin. “Mechanisms for Scaffold-Mediated Regulation of Kinase Activity in the Wnt Signaling Pathway.” 2019. Doctoral Dissertation, University of Washington. Accessed January 28, 2021.
http://hdl.handle.net/1773/44746.
MLA Handbook (7th Edition):
Fagnan, Erin. “Mechanisms for Scaffold-Mediated Regulation of Kinase Activity in the Wnt Signaling Pathway.” 2019. Web. 28 Jan 2021.
Vancouver:
Fagnan E. Mechanisms for Scaffold-Mediated Regulation of Kinase Activity in the Wnt Signaling Pathway. [Internet] [Doctoral dissertation]. University of Washington; 2019. [cited 2021 Jan 28].
Available from: http://hdl.handle.net/1773/44746.
Council of Science Editors:
Fagnan E. Mechanisms for Scaffold-Mediated Regulation of Kinase Activity in the Wnt Signaling Pathway. [Doctoral Dissertation]. University of Washington; 2019. Available from: http://hdl.handle.net/1773/44746

University of Minnesota
26.
Baik, June.
The role of endoglin during mesoderm specification.
Degree: PhD, Molecular, Cellular, Developmental Biology and Genetics, 2015, University of Minnesota
URL: http://hdl.handle.net/11299/181778
► Embryogenesis requires spatiotemporally regulated cellular signals and gene expressions that influence lineage specification, progenitor patterning, and morphogenesis. However the molecular mechanisms that explain how the…
(more)
▼ Embryogenesis requires spatiotemporally regulated cellular signals and gene expressions that influence lineage specification, progenitor patterning, and morphogenesis. However the molecular mechanisms that explain how the progenitors commit into different lineages are still poorly understood. Endoglin (ENG) is an ancillary receptor for transforming growth factor-beta (TGF-β) and lack of ENG leads impaired hematopoiesis, cardiac defects and embryonic lethality. Considering the fact that certain mesodermal population can give rise to both cardiac and hematopoietic cells, it indicates that endoglin may play a role in these cell types. Thereby during my predoctoral training, I have aimed to elucidate how endoglin regulates the cell fate choice that results in the specification of early mesodermal precursors into the cardiac or hematopoietic cells. In Chaper 2, I demonstrate that ENG promotes the commitment of early mesodermal progenitors to the hematopoietic lineage at the expense of the cardiac cell fate and ENG-mediated hematopoietic commitment occurs through BMP signaling pathway. In Chapter 3, I illustrate the mechanistic insights how ENG, through activation of BMP and WNT signals, regulates the cell fate decision to secure mesoderm commitment towards the hematopoietic lineage. These studies will uncover a novel role of ENG as a potential mediator between BMP and WNT signaling during mesoderm specification and contribute to broaden our understanding of TGF-β signaling in cell fate decision.
Subjects/Keywords: Cardiogenesis; Embryoid bodies; Endoglin; Hematopoiesis; Mesoderm; Signaling pathway
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APA (6th Edition):
Baik, J. (2015). The role of endoglin during mesoderm specification. (Doctoral Dissertation). University of Minnesota. Retrieved from http://hdl.handle.net/11299/181778
Chicago Manual of Style (16th Edition):
Baik, June. “The role of endoglin during mesoderm specification.” 2015. Doctoral Dissertation, University of Minnesota. Accessed January 28, 2021.
http://hdl.handle.net/11299/181778.
MLA Handbook (7th Edition):
Baik, June. “The role of endoglin during mesoderm specification.” 2015. Web. 28 Jan 2021.
Vancouver:
Baik J. The role of endoglin during mesoderm specification. [Internet] [Doctoral dissertation]. University of Minnesota; 2015. [cited 2021 Jan 28].
Available from: http://hdl.handle.net/11299/181778.
Council of Science Editors:
Baik J. The role of endoglin during mesoderm specification. [Doctoral Dissertation]. University of Minnesota; 2015. Available from: http://hdl.handle.net/11299/181778

University of Southern California
27.
He, Kaijie.
The cancer stem-like phenotype: therapeutics, phenotypic
plasticity and mechanistic studies.
Degree: PhD, Genetic, Molecular and Cellular Biology, 2012, University of Southern California
URL: http://digitallibrary.usc.edu/cdm/compoundobject/collection/p15799coll3/id/61631/rec/6485
► Cancer claims over 500,000 lives in the U.S. annually, a mortality rate that is largely attributable to solid tumors that have metastasized and become resistant…
(more)
▼ Cancer claims over 500,000 lives in the U.S. annually,
a mortality rate that is largely attributable to solid tumors that
have metastasized and become resistant to available treatments.
This type of disease progression may be mediated by cancer stem
cells (CSC), rare and unique cancer cells recently identified in
many types of malignancies, and these CSC are thought to play a
central role in tumor formation, therapy-resistance, and ultimately
cancer progression and metastasis. ❧ Unfortunately, however, to
date there are very few effective CSC-targeting therapies. To
address this question, we isolated a putative CSC population from
human prostate tumors and cell lines, and we showed for the first
time that these cells possess extremely high telomerase activity
relative to the bulk, unselected cancer cells. Strikingly,
telomerase interference – reprogramming telomerase to add incorrect
“toxic” telomeres – could induce rapid apoptosis and marked growth
inhibition in prostate CSC and abrogated their ability to form new
tumors in SCID mice, which offers the first tumor-derived and in
vivo evidence that telomerase may ultimately form the basis for
more effective new CSC-targeting therapies. ❧ The drug resistant
and brisk tumor initiation abilities have been viewed as
pre-existing phenotypes only present in the small subpopulation of
cancer stem cells, and they have been intuitively conceptualized as
self-renewing founder cells from which more differentiated cancer
cells derive. However, recent work in cancer cell lines has
demonstrated that drug-resistant tumor initiating features can
emerge de novo within fractionated subpopulations of cells
initially lacking these phenotypes. In our study, we used a “side
population” cancer stem cell model with GFP-labeling technique, and
demonstrated for the first time that adaptive, cancer-promoting
traits like drug-resistance and brisk tumor initiation arise not
only as solitary events under selective pressures, but also as
highly orchestrated transitions occurring concurrently in large
numbers of cells even without specifically-induced drug selection,
ectopic gene expression, or fractionation into subpopulations. In
addition, our follow-up mechanistic studies have identified the
PI3K/Akt/b-catenin/CBP
pathway to play a critical role in
regulating this dynamic equilibrium and regeneration of CSC. We
hope our findings would contribute to a better understanding of
CSC, and can potentially offer new strategies for targeting these
drug-resistant, tumor-forming cells, ultimately leading to more
effective treatments for patients.
Advisors/Committee Members: Pinski, Jacek K. (Committee Chair), Goldkorn, Amir (Committee Member), Adams, Gregor B. (Committee Member), Kobielak, Agnieszka (Committee Member), Kahn, Michael (Committee Member).
Subjects/Keywords: cancer stem cell; telomerase; side population; plasticity; signaling pathway
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❌
APA ·
Chicago ·
MLA ·
Vancouver ·
CSE |
Export
to Zotero / EndNote / Reference
Manager
APA (6th Edition):
He, K. (2012). The cancer stem-like phenotype: therapeutics, phenotypic
plasticity and mechanistic studies. (Doctoral Dissertation). University of Southern California. Retrieved from http://digitallibrary.usc.edu/cdm/compoundobject/collection/p15799coll3/id/61631/rec/6485
Chicago Manual of Style (16th Edition):
He, Kaijie. “The cancer stem-like phenotype: therapeutics, phenotypic
plasticity and mechanistic studies.” 2012. Doctoral Dissertation, University of Southern California. Accessed January 28, 2021.
http://digitallibrary.usc.edu/cdm/compoundobject/collection/p15799coll3/id/61631/rec/6485.
MLA Handbook (7th Edition):
He, Kaijie. “The cancer stem-like phenotype: therapeutics, phenotypic
plasticity and mechanistic studies.” 2012. Web. 28 Jan 2021.
Vancouver:
He K. The cancer stem-like phenotype: therapeutics, phenotypic
plasticity and mechanistic studies. [Internet] [Doctoral dissertation]. University of Southern California; 2012. [cited 2021 Jan 28].
Available from: http://digitallibrary.usc.edu/cdm/compoundobject/collection/p15799coll3/id/61631/rec/6485.
Council of Science Editors:
He K. The cancer stem-like phenotype: therapeutics, phenotypic
plasticity and mechanistic studies. [Doctoral Dissertation]. University of Southern California; 2012. Available from: http://digitallibrary.usc.edu/cdm/compoundobject/collection/p15799coll3/id/61631/rec/6485

University of Arizona
28.
Gao, Yang.
Lithium-Induced Nephropathy: The Role Of mTOR Signaling, Primary Cilia And Hedgehog Pathway
.
Degree: 2014, University of Arizona
URL: http://hdl.handle.net/10150/347188
► Lithium is given to millions of bipolar disorder or post-traumatic disorder patients. The recent studies also support a role for lithium in treating neurodegenerative disease…
(more)
▼ Lithium is given to millions of bipolar disorder or post-traumatic disorder patients. The recent studies also support a role for lithium in treating neurodegenerative disease such as Parkinson's disease and stroke. Lithium treatment leads to lithium nephropathy, which includes lithium-induced nephrogenic diabetic insipidus (NDI), lithium-induced renal cell proliferation leading to the formation of microcysts in the kidney, and lithium-induced renal fibrosis. However, there is still a gap in understanding the mechanisms and
signaling pathways involved in regulating lithium-induced nephropathy. mTOR
pathway activation and primary cilia are known to be associated with the abnormal renal cell proliferation and the formation of renal cysts in polycystic kidney disease, a renal disease model similar to our lithium model. The activation of hedgehog
pathway is associated with the renal fibrosis observed in the unilateral ureteral obstruction and unilateral ischemia reperfusion injury models of chronic renal injury. Thus, I hypothesize that mTOR
signaling pathway, primary cilia and hedgehog
pathway may all contribute to lithium-induced nephropathy. To address the hypothesis that the mTOR
signaling pathway may be responsible for lithium-induced renal collecting duct proliferation, mTOR
pathway activation was assessed in lithium-treated mice and lithium-treated mouse inner medullary collecting duct (mIMCD3) cells. Lithium activated mTOR
signaling pathway in renal collecting duct cells both in vivo and in vitro. Rapamycin, an inhibitor of mTOR, blocked lithium-induced renal cell proliferation in renal cortex and medulla in vivo and in renal collecting duct cells in vitro, supporting the hypothesis. However, rapamycin did not improve lithium-induced reduction of urine osmolality, suggesting mTOR
signaling pathway may not contribute to lithium-induced NDI. To address the hypothesis that primary cilia may be necessary for lithium-induced mTOR activation and renal cell proliferation, primary cilia deficient cells were used to assess mTOR
pathway activation and cell proliferation in response to lithium treatment. The absence of primary cilia abolished lithium-induced activation of mTOR
pathway and cell proliferation, which supports the hypothesis. To address the hypothesis that lithium elongates primary cilia length, which is mediated by mTOR
signaling pathway, primary cilia length alternation was assessed in the kidney and in mIMCD3 cells in response to lithium treatment. Lithium increased primary cilia length in renal collecting duct cells of cortex, outer medulla, and inner medulla kidney regions in vivo and in mIMCD3 cells in vitro. Rapamycin reversed lithium-induced elongation of primary cilia in renal cortical and outer medullary collecting duct cells in vivo, and blocked the increase of primary cilia length in mIMCD3 cells in vitro, which support the hypothesis. To address the hypothesis that lithium activates the hedgehog
pathway in a Smoothened (smo, a key regulator of the hedgehog
pathway)-dependent manner in renal…
Advisors/Committee Members: Brooks, Heddwen L (advisor), Brooks, Heddwen L. (committeemember), Lynch, Ronald M. (committeemember), McDermott, Kimberly M. (committeemember), Wright, Stephen H. (committeemember).
Subjects/Keywords: mTOR Signaling Pathway;
Primary Cilia;
Physiological Sciences;
Lithium-induced Nephropathy
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❌
APA ·
Chicago ·
MLA ·
Vancouver ·
CSE |
Export
to Zotero / EndNote / Reference
Manager
APA (6th Edition):
Gao, Y. (2014). Lithium-Induced Nephropathy: The Role Of mTOR Signaling, Primary Cilia And Hedgehog Pathway
. (Doctoral Dissertation). University of Arizona. Retrieved from http://hdl.handle.net/10150/347188
Chicago Manual of Style (16th Edition):
Gao, Yang. “Lithium-Induced Nephropathy: The Role Of mTOR Signaling, Primary Cilia And Hedgehog Pathway
.” 2014. Doctoral Dissertation, University of Arizona. Accessed January 28, 2021.
http://hdl.handle.net/10150/347188.
MLA Handbook (7th Edition):
Gao, Yang. “Lithium-Induced Nephropathy: The Role Of mTOR Signaling, Primary Cilia And Hedgehog Pathway
.” 2014. Web. 28 Jan 2021.
Vancouver:
Gao Y. Lithium-Induced Nephropathy: The Role Of mTOR Signaling, Primary Cilia And Hedgehog Pathway
. [Internet] [Doctoral dissertation]. University of Arizona; 2014. [cited 2021 Jan 28].
Available from: http://hdl.handle.net/10150/347188.
Council of Science Editors:
Gao Y. Lithium-Induced Nephropathy: The Role Of mTOR Signaling, Primary Cilia And Hedgehog Pathway
. [Doctoral Dissertation]. University of Arizona; 2014. Available from: http://hdl.handle.net/10150/347188

Clemson University
29.
Natarajan, Ojas.
Investigation of Molecular Mechanisms Involved in Retardation of Immunosenescence in Caenorhabditis elegans by Royal Jelly.
Degree: PhD, Biological Sciences, 2018, Clemson University
URL: https://tigerprints.clemson.edu/all_dissertations/2555
► With recent advances in medicine, life expectancy has been steadily increasing. This increasing geriatric populous encounter various age-associated diseases including decline in immunity called…
(more)
▼ With recent advances in medicine, life expectancy has been steadily increasing. This increasing geriatric populous encounter various age-associated diseases including decline in immunity called immunosenescence, which renders them susceptible to an extended array of pathogens like
Staphylococcus aureus. These nosocomial pathogens gain resistance to a variety of antibiotics, hence a strong innate immune system is important for host survival.
Caenorhabditis elegans has no complex immune system. Hence, it is an excellent model to study the innate immune response.
Royal jelly, a nutraceutical has been previously shown to prolong the lifespan and UV, oxidative and heat shock resistance in
C. elegans. Here, I show that royal jelly supplementation can promote survival of
C. elegans when infected with several pathogens across ages of the worm. Royal jelly supplementation introduced since developmental stages or from later ages can protect the worms from pathogenic infections. Although royal jelly is known to have antibacterial properties, it does not inhibit the growth of these pathogens at the concentrations used in this study. Royal jelly improves the integrity of the
C. elegans gut which contributes to immunity of the worm.
Through episatasis genetic assays the involvement of DAF-16/ FOXO and Insulin like
signaling pathway (ILS) in royal jelly mediated improvement of immunity was observed.The conserved immune response
pathway in
C. elegans p38 MAPK and the canonical Wnt
signaling are also required for royal jelly mediated immune response.
Advisors/Committee Members: Yuqing Dong, Min Cao, William S Baldwin, Charles D Rice.
Subjects/Keywords: Aing; C. elegans; Immunity; immunosenescence; S. aureus; signaling pathway
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❌
APA ·
Chicago ·
MLA ·
Vancouver ·
CSE |
Export
to Zotero / EndNote / Reference
Manager
APA (6th Edition):
Natarajan, O. (2018). Investigation of Molecular Mechanisms Involved in Retardation of Immunosenescence in Caenorhabditis elegans by Royal Jelly. (Doctoral Dissertation). Clemson University. Retrieved from https://tigerprints.clemson.edu/all_dissertations/2555
Chicago Manual of Style (16th Edition):
Natarajan, Ojas. “Investigation of Molecular Mechanisms Involved in Retardation of Immunosenescence in Caenorhabditis elegans by Royal Jelly.” 2018. Doctoral Dissertation, Clemson University. Accessed January 28, 2021.
https://tigerprints.clemson.edu/all_dissertations/2555.
MLA Handbook (7th Edition):
Natarajan, Ojas. “Investigation of Molecular Mechanisms Involved in Retardation of Immunosenescence in Caenorhabditis elegans by Royal Jelly.” 2018. Web. 28 Jan 2021.
Vancouver:
Natarajan O. Investigation of Molecular Mechanisms Involved in Retardation of Immunosenescence in Caenorhabditis elegans by Royal Jelly. [Internet] [Doctoral dissertation]. Clemson University; 2018. [cited 2021 Jan 28].
Available from: https://tigerprints.clemson.edu/all_dissertations/2555.
Council of Science Editors:
Natarajan O. Investigation of Molecular Mechanisms Involved in Retardation of Immunosenescence in Caenorhabditis elegans by Royal Jelly. [Doctoral Dissertation]. Clemson University; 2018. Available from: https://tigerprints.clemson.edu/all_dissertations/2555

Clemson University
30.
Wang, Xiaoxia.
Studies of Molecular Mechanisms of Royal Jelly Mediated Healthspan Promotion in Caenorhabditis Elegans.
Degree: PhD, Biological Sciences, 2016, Clemson University
URL: https://tigerprints.clemson.edu/all_dissertations/1652
► Numerous studies have demonstrated that many nutraceuticals have potential capacity to mitigate the symptoms of aging and age-related disorders. We found that Royal Jelly (RJ/eRJ)…
(more)
▼ Numerous studies have demonstrated that many nutraceuticals have potential capacity to mitigate the symptoms of aging and age-related disorders. We found that Royal Jelly (RJ/eRJ) consumption could extend C. elegans lifespan and increase stress tolerance in an IIS/DAF-16 dependent manner. In consideration that the transactivity of DAF-16 is tightly controlled by its co-factors, our further results indicated that SIR-2.1, 14-3-3, and HCF-1 could interact with each other to fine-tune the activity of DAF-16. Additionally, these co-factors were also required in RJ/eRJ mediated stress tolerance. Given that aging is characterized with progressively declined physiological functions, it is intriguing to investigate whether RJ/eRJ supplementation could slow down the development of neurodegenerative diseases. Strikingly, our results showed that RJ/eRJ supplementation delayed the β-amyloid (Aβ)-toxicity induced body paralysis in C. elegans AD model. The genetic analysis indicated that the RJ/eRJ mediated Aβ toxicity alleviation required Insulin/IGF
Signaling (IIS)
pathway and DAF-16, rather than HSF-1 and SKN-1. Further research found that RJ/eRJ relied on DAF-16 to significantly improve the protein solubility in aged worms, which implied that RJ/eRJ supplementation promoted proteostasis and reduced proteotoxicity in AD worms. Additionally, RJ/eRJ also increased the solubility of Aβ species. In considering that RJ/eRJ supplementation slowed down the Aβ-induced paralysis in C. elegans, it is possible that RJ/eRJ mediated protection against Aβ toxicity might be dependent on increasing the solubility of Aβ species. Overall, our findings revealed that the anti-aging function of RJ/eRJ supplementation and underscored the relationship between the improved proteostasis and the prevention of neurodegenerative disorders.
Advisors/Committee Members: Dr.Yuqing Dong, Committee Chair, Dr.Min Cao, Committee Co-Chair, Dr.William Baldwin, Dr.Charles Rice.
Subjects/Keywords: aging; Alzheimer's Disease; C. elegans; Insulin Signaling Pathway; Proteostasis; Royal Jelly
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❌
APA ·
Chicago ·
MLA ·
Vancouver ·
CSE |
Export
to Zotero / EndNote / Reference
Manager
APA (6th Edition):
Wang, X. (2016). Studies of Molecular Mechanisms of Royal Jelly Mediated Healthspan Promotion in Caenorhabditis Elegans. (Doctoral Dissertation). Clemson University. Retrieved from https://tigerprints.clemson.edu/all_dissertations/1652
Chicago Manual of Style (16th Edition):
Wang, Xiaoxia. “Studies of Molecular Mechanisms of Royal Jelly Mediated Healthspan Promotion in Caenorhabditis Elegans.” 2016. Doctoral Dissertation, Clemson University. Accessed January 28, 2021.
https://tigerprints.clemson.edu/all_dissertations/1652.
MLA Handbook (7th Edition):
Wang, Xiaoxia. “Studies of Molecular Mechanisms of Royal Jelly Mediated Healthspan Promotion in Caenorhabditis Elegans.” 2016. Web. 28 Jan 2021.
Vancouver:
Wang X. Studies of Molecular Mechanisms of Royal Jelly Mediated Healthspan Promotion in Caenorhabditis Elegans. [Internet] [Doctoral dissertation]. Clemson University; 2016. [cited 2021 Jan 28].
Available from: https://tigerprints.clemson.edu/all_dissertations/1652.
Council of Science Editors:
Wang X. Studies of Molecular Mechanisms of Royal Jelly Mediated Healthspan Promotion in Caenorhabditis Elegans. [Doctoral Dissertation]. Clemson University; 2016. Available from: https://tigerprints.clemson.edu/all_dissertations/1652
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