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Cal Poly
1.
Charnaux, Amelie Jeanne.
HYDROLOGIC ALTERATION AND SEDIMENTATION IN THE UPPER HENRY’S FORK WATERSHED.
Degree: MS, Earth and Soil Sciences, 2011, Cal Poly
URL: https://digitalcommons.calpoly.edu/theses/565
;
10.15368/theses.2011.122
► <a>Abstract</a> Hydrologic Alteration and Sedimentation in the Upper Henry’s Fork Watershed Amelie Jeanne Charnaux The Henry’s Fork of the Snake River is venerated by…
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▼ <a>Abstract</a>
Hydrologic Alteration and Sedimentation in the Upper Henry’s Fork Watershed
Amelie Jeanne Charnaux
The Henry’s Fork of the Snake River is venerated by the global recreational community as one of the finest trout fishing streams on the planet. Furthermore, this remarkable waterway flows within the bounds of one of the most important ecological corridors in the equally world-renowned Greater Yellowstone Ecosystem. While the recreational and biological features of this corner of Idaho may capture the interest of the broader public, the waterway is equally significant to the livelihoods of local interests, such as the ranching and farming communities. With the stakes running high for all interest groups, a case study of the Henry’s Fork watershed provides a valuable baseline narrative for understanding decision-making related to water resources not only in Idaho, but also in other Western states.
Environmental impacts of the Henry’s Lake Dam and management of the stream below the structure were evaluated by literature review and GIS mapping, with research emphasis placed on the ecological integrity and fisheries of the Upper Henry’s Fork Subbasin. The literature review focused on natural processes in stream ecosystems and anthropogenic impacts, with the goal of providing information for the development of management policies that minimize the negative impacts of current flow management and land use.
Literature sources overwhelmingly agree that the alteration of natural hydrologic regimes is the most serious and continuing threat to the sustainability of river ecosystems. In recent decades, downstream recreational fishing declined on the upper Henry’s Fork due to increased sedimentation, inciting investigation as to the source. Three major anthropogenic factors targeting one section of the river, the Henry’s Lake Outlet, set the stage for excess sedimentation.
First, the Henry’s Lake Dam was constructed in 1923, impacting the Outlet’s hydrology through changes in the timing, magnitude, and frequency of low and high flows. Second, an artificial stream channel was constructed in the 1920s to bypass the meandering Outlet in order to increase conveyance capacity of irrigation water from Henry’s Lake to downstream water users. Third, long-term livestock grazing along this section of river dramatically reduced riparian and upland vegetation, triggering the loss of stream-bank stability and increasing erosion and sedimentation. These management practices have resulted in significant loss of biodiversity in the stream ecosystem and an increased rate of erosion in the Outlet.
The Henry’s Lake Outlet restoration project, led by the Henry’s Fork Foundation, provides the opportunity to predict potential effects of large-scale restoration in the Henry’s Fork watershed. The project seeks to reduce sediment delivery downstream from the Outlet by rerouting flow from the straightened channel into the historic channel. The project tests the…
Advisors/Committee Members: Thomas J. Rice, Ph.D..
Subjects/Keywords: Terrestrial and Aquatic Ecology
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APA (6th Edition):
Charnaux, A. J. (2011). HYDROLOGIC ALTERATION AND SEDIMENTATION IN THE UPPER HENRY’S FORK WATERSHED. (Masters Thesis). Cal Poly. Retrieved from https://digitalcommons.calpoly.edu/theses/565 ; 10.15368/theses.2011.122
Chicago Manual of Style (16th Edition):
Charnaux, Amelie Jeanne. “HYDROLOGIC ALTERATION AND SEDIMENTATION IN THE UPPER HENRY’S FORK WATERSHED.” 2011. Masters Thesis, Cal Poly. Accessed February 26, 2021.
https://digitalcommons.calpoly.edu/theses/565 ; 10.15368/theses.2011.122.
MLA Handbook (7th Edition):
Charnaux, Amelie Jeanne. “HYDROLOGIC ALTERATION AND SEDIMENTATION IN THE UPPER HENRY’S FORK WATERSHED.” 2011. Web. 26 Feb 2021.
Vancouver:
Charnaux AJ. HYDROLOGIC ALTERATION AND SEDIMENTATION IN THE UPPER HENRY’S FORK WATERSHED. [Internet] [Masters thesis]. Cal Poly; 2011. [cited 2021 Feb 26].
Available from: https://digitalcommons.calpoly.edu/theses/565 ; 10.15368/theses.2011.122.
Council of Science Editors:
Charnaux AJ. HYDROLOGIC ALTERATION AND SEDIMENTATION IN THE UPPER HENRY’S FORK WATERSHED. [Masters Thesis]. Cal Poly; 2011. Available from: https://digitalcommons.calpoly.edu/theses/565 ; 10.15368/theses.2011.122

Eastern Illinois University
2.
Hastings, Ryan Patrick.
Effects of Dams on Fish and Macroinvertebrate Communities in the Vermilion River, IL.
Degree: MS, 2014, Eastern Illinois University
URL: https://thekeep.eiu.edu/theses/1264
► Dams are a main source of anthropogenic disturbances on river systems and can affect rivers in a variety of ways. Dams have the ability…
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▼ Dams are a main source of anthropogenic disturbances on river systems and can affect rivers in a variety of ways. Dams have the ability to change rivers from lotic to lentic habitats, affect sediment transportation, connectivity, water quality, linkages with wetlands and the quality of in-stream and riparian habitats. The Danville Dam was constructed in 1914 on the Vermilion River in Danville, Illinois and is becoming a safety hazard for human recreation on the Vermilion River, resulting in three deaths in the last 10 years. The Illinois Department of Natural Resources in conjunction with the city of Danville has proposed to remove the Danville dam on the main channel fall 2015 and an additional low head dam, Ellsworth Dam, in its tributary the North Fork Vermilion in fall 2014.
To assess the impacts of removing the Ellsworth and Danville dams on the
aquatic biota and stream habitat quality. Beginning October 2012, we assessed the fish and macroinvertebrate assemblages in twelve, 100 meter long sections of river. Six of the 12 sites were located in the North Fork, referred to as Ellsworth Dam, and six sites in the Vermilion, referred to as Danville Dam sites. Each dam consisted of two sites below the dam and four sites above the dam. The above dam sites consisted of a site directly above the dam, the last 100 meters of the pool, the first 100 meters of the river and an upstream site (the farthest accessible upstream location). This sampling captures the community composition both above and below the dam (immediate impacts) and characteristics of sites above the dam's influence.
The effects of the dams were greatest seen at base flow, in the fall seasons. Data shows fall community composition demonstrates strong influences of both dams on fish assemblages and revealed compositional differences between the two drainages. In sharp contrast, a cluster analysis showed no separation in community composition between rivers or sites in the spring. Therefore base flow was used to assess the fish and macroinvertebrate community structure. Non-metric Multidimensional Scaling was used to assess the structure of fish and macroinvertebrate communities. Per-Manova analysis verified river, location, and their interaction to be significant on fish assemblages. Mantel tests showed there was an effect of habitat on fish community structure but no significant effect of physical distance on fish assemblages. Per-Manova reflected the complexity of compositional relationships with both river and the interaction of river and location to be significant on macroinvertebrate assemblages. Unlike the fish, macroinvertebrate assemblages were affected by distance but not by local environment.
The Vermilion River system is one of the highest quality systems in Illinois. The removal of the dams will allow the main channel to reconnect and also provide access to upstream habitats in the North Fork tributary. Eliminating physical barriers will allow fish to move upstream allowing them to restore populations. Returning to a free…
Advisors/Committee Members: Robert E. Colombo, Scott J. Meiners.
Subjects/Keywords: Terrestrial and Aquatic Ecology
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APA (6th Edition):
Hastings, R. P. (2014). Effects of Dams on Fish and Macroinvertebrate Communities in the Vermilion River, IL. (Masters Thesis). Eastern Illinois University. Retrieved from https://thekeep.eiu.edu/theses/1264
Chicago Manual of Style (16th Edition):
Hastings, Ryan Patrick. “Effects of Dams on Fish and Macroinvertebrate Communities in the Vermilion River, IL.” 2014. Masters Thesis, Eastern Illinois University. Accessed February 26, 2021.
https://thekeep.eiu.edu/theses/1264.
MLA Handbook (7th Edition):
Hastings, Ryan Patrick. “Effects of Dams on Fish and Macroinvertebrate Communities in the Vermilion River, IL.” 2014. Web. 26 Feb 2021.
Vancouver:
Hastings RP. Effects of Dams on Fish and Macroinvertebrate Communities in the Vermilion River, IL. [Internet] [Masters thesis]. Eastern Illinois University; 2014. [cited 2021 Feb 26].
Available from: https://thekeep.eiu.edu/theses/1264.
Council of Science Editors:
Hastings RP. Effects of Dams on Fish and Macroinvertebrate Communities in the Vermilion River, IL. [Masters Thesis]. Eastern Illinois University; 2014. Available from: https://thekeep.eiu.edu/theses/1264

Eastern Illinois University
3.
Rayford, Sharon V.
Habitat Associations of Larval and Juvenile Fishes in a Large Unimpounded River.
Degree: MS, 2014, Eastern Illinois University
URL: https://thekeep.eiu.edu/theses/1296
► Larval and juvenile life stages of fish are numerically the dominant component of fish populations. These early life stages experience high levels of mortality…
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▼ Larval and juvenile life stages of fish are numerically the dominant component of fish populations. These early life stages experience high levels of mortality due, in part, to anthropogenic disturbances, but little is known about which habitats they utilize in large-rivers, as they are often difficult to sample and identify. My study examined the larval and juvenile fish assemblages in different habitats within the lower 322 km of the Wabash River. Fish were sampled with a conical-cylindrical ichthyoplankton net (larvae) and a DC-electrified mini-Missouri trawl (juveniles) between May and October 2013. Larval fish were collected every two weeks from mid-May through late July and then monthly from August through October; juvenile fish were sampled monthly May - October. Both gears were used to sample fish from three bend habitats (inside bend, outside bend, and main channel). Additionally, larval fish were collected from tributary mouths. Eggs collected in the samples were used to model passive drift in the system and compared egg CPUE between habitats to larval densities. I found that density patterns between habitats varied between these eggs and larval fish, suggesting that larvae were not passively drifting in the system. My results indicate that larval fish within certain family groups are able to utilize habitats differently than if they were only passively drifting with the flow of water, and are instead selecting for channel margin habitats. I also found that juvenile fish assemblages within inside bend were more similar than assemblages within outside bend and main channel habitats; however, these patterns were less distinct for larval and juvenile fish during fall when the habitats became more homogenized, suggesting that some environmental characteristic, most likely flow, was influencing assemblage composition. The electrified trawl was effective at sampling small-bodied fish as almost 88% of the total catch was less than 120 mm and 33 species were sampled at total lengths less than 200 mm. Because this distribution is noticeably different than electrofishing and hoop netting surveys, I recommend combining trawling with these gears to supplement surveys in large rivers to better survey the early life history stages of fishes.
Advisors/Committee Members: Eric K. Bollinger.
Subjects/Keywords: Terrestrial and Aquatic Ecology
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APA ·
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MLA ·
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APA (6th Edition):
Rayford, S. V. (2014). Habitat Associations of Larval and Juvenile Fishes in a Large Unimpounded River. (Masters Thesis). Eastern Illinois University. Retrieved from https://thekeep.eiu.edu/theses/1296
Chicago Manual of Style (16th Edition):
Rayford, Sharon V. “Habitat Associations of Larval and Juvenile Fishes in a Large Unimpounded River.” 2014. Masters Thesis, Eastern Illinois University. Accessed February 26, 2021.
https://thekeep.eiu.edu/theses/1296.
MLA Handbook (7th Edition):
Rayford, Sharon V. “Habitat Associations of Larval and Juvenile Fishes in a Large Unimpounded River.” 2014. Web. 26 Feb 2021.
Vancouver:
Rayford SV. Habitat Associations of Larval and Juvenile Fishes in a Large Unimpounded River. [Internet] [Masters thesis]. Eastern Illinois University; 2014. [cited 2021 Feb 26].
Available from: https://thekeep.eiu.edu/theses/1296.
Council of Science Editors:
Rayford SV. Habitat Associations of Larval and Juvenile Fishes in a Large Unimpounded River. [Masters Thesis]. Eastern Illinois University; 2014. Available from: https://thekeep.eiu.edu/theses/1296

Eastern Illinois University
4.
Rohr, Jessica Marie.
Assessment and Recovery of Stream Restoration Efforts on Fish Communities.
Degree: MS, Biological Sciences, 2019, Eastern Illinois University
URL: https://thekeep.eiu.edu/theses/4475
► Aquatic systems are subjected to disturbances of various types, including natural and anthropogenic, or can deteriorate due to accumulating unfavorable conditions, including receding banks,…
(more)
▼ Aquatic systems are subjected to disturbances of various types, including natural and anthropogenic, or can deteriorate due to accumulating unfavorable conditions, including receding banks, decreasing riparian vegetation, and disrupted flow patterns. An analysis was done on a variety of streams in central Illinois that experienced one or multiple anthropogenic disturbances without remediation to determine the natural recovery dynamics of each system. A separate analysis was performed on a multi-site restored stream with a complex restoration project with a variety of restoration methods. This data were collected over at periods of time spanning from 5-15 years, including time prior to disturbance/restoration and post-disturbance/restoration. Each study included a control site in which to compare disturbed or restored sites. Data collection included fish composition, fish density (catch per unit effort), and index of biotic quality (IBI). Analyses included NMS ordination and Euclidean distances. I found that the more disturbances a system experiences, the less it recovers to its original composition and potentially shifts to a new community. Large shifts were experienced in community metrics immediately after the disturbance. Additionally, after about 36 months or sooner post-disturbance, most streams returned to or close to pre-disturbance conditions in regards to species richness, fish density, and IBI. Additionally, there appeared to be a level of relative stasis after about 36 months post-disturbance. In systems with two or fewer disturbances, community metrics surprisingly improved past pre-disturbance conditions. In the restored sites, there appeared to be large amounts of variation between sites and treatment methods, making definitive conclusions difficult to attain. All restoration sites displayed large-scale changes in species abundance, both increases and decreases, and variable colonizations and extinctions as a result of restoration. Control sites for restoration assessment exhibited minimal shifts in composition during pre-restoration sampling. However, composition following restoration varied dramatically between all sampling events with large compositional shifts occurring through the last sampling event. The large amount of variation in data suggest that this restoration was only moderately effective, at least to date. In conclusion, disturbed sites should be monitored for at least three years to fully understand its recovery dynamics and to determine whether active restoration efforts are warranted. Sites that do not recover during this time frame will likely require direct intervention to achieve recovery. Collectively, such information will help fisheries managers to better predict whether a proposed restoration project will be successful based on previous data.
Advisors/Committee Members: Scott J. Meiners, Robert E. Colombo, Eden L. Effert-Fanta.
Subjects/Keywords: Terrestrial and Aquatic Ecology
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❌
APA ·
Chicago ·
MLA ·
Vancouver ·
CSE |
Export
to Zotero / EndNote / Reference
Manager
APA (6th Edition):
Rohr, J. M. (2019). Assessment and Recovery of Stream Restoration Efforts on Fish Communities. (Masters Thesis). Eastern Illinois University. Retrieved from https://thekeep.eiu.edu/theses/4475
Chicago Manual of Style (16th Edition):
Rohr, Jessica Marie. “Assessment and Recovery of Stream Restoration Efforts on Fish Communities.” 2019. Masters Thesis, Eastern Illinois University. Accessed February 26, 2021.
https://thekeep.eiu.edu/theses/4475.
MLA Handbook (7th Edition):
Rohr, Jessica Marie. “Assessment and Recovery of Stream Restoration Efforts on Fish Communities.” 2019. Web. 26 Feb 2021.
Vancouver:
Rohr JM. Assessment and Recovery of Stream Restoration Efforts on Fish Communities. [Internet] [Masters thesis]. Eastern Illinois University; 2019. [cited 2021 Feb 26].
Available from: https://thekeep.eiu.edu/theses/4475.
Council of Science Editors:
Rohr JM. Assessment and Recovery of Stream Restoration Efforts on Fish Communities. [Masters Thesis]. Eastern Illinois University; 2019. Available from: https://thekeep.eiu.edu/theses/4475
5.
Purintun, Jordan M.
Floristic Inventory and Vegetation Analysis of Lands Adjacent to the Missouri River on the Lower Brule Sioux Reservation.
Degree: MS, Natural Resource Management, 2015, South Dakota State University
URL: https://openprairie.sdstate.edu/etd/1770
► A floristic survey was conducted on lands adjacent to the Missouri River on the Lower Brule Sioux Reservation in central South Dakota. Selected natural…
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▼ A floristic survey was conducted on lands adjacent to the Missouri River on the Lower Brule Sioux Reservation in central South Dakota. Selected natural areas, including grasslands, badlands, wetlands, and woodlands, were explored and inventoried multiple times during the growing seasons of 2011-2012. The annotated checklist of the vascular plants includes 442 species in 258 genera and 78 families, including 182 species previously unrecorded in Lyman County. The woodlands of the Medicine Creek floodplain and Ft. Hale ravines were surveyed between 2011-2013; trees and understory vegetation were sampled in 2013 using 12, 50-m belt transects, including 4 in the Medicine Creek floodplain and 8 from individual Ft. Hale drainages. The Medicine Creek floodplain (S = 88, Native S = 63, C̅ = 2.64, FQI = 21.95) supported woodland dominated by green ash; the herbaceous layer included flood tolerant mesophytes and ruderals interspersed in a matrix of Virginia wildrye. The Ft. Hale ravines (S = 101, Native S = 81, C̅ = 3.56, FQI = 31.71) supported nearly pure stands of bur oak and subcanopies of eastern red cedar saplings. The shaded understories were sparsely vegetated and were characterized by a combination of ecologically conservative mesophytes, ruderals, and vegetative specimens of species more common in adjacent open habitats. xi Understory cover data from the Ft. Hale ravines and Medicine Creek floodplain were compared with similar data collected in Missouri River floodplain forests in central North Dakota in the early 1970s. Nonmetric Multidimensional Scaling produced a 2- dimensional solution clearly distinguishing Missouri River floodplain forests from the Reservation woodlands (stress = 19.380, cumulative R2 = 0.610). A comparison of species inventories taken from the Ft. Hale ravines, Medicine Creek floodplain, and North Dakota floodplain forests indicate the Reservation woodlands are both less diverse and less ecologically conservative than either the cottonwood (S = 158, Native S = 127, C̅ = 4.29, FQI = 48.29) or the later succession ash-elm-box elder forests (S = 157, Native S = 127, C̅ = 4.59, FQI = 51.07) of the North Dakota floodplain.
Advisors/Committee Members: Gary E. Larson.
Subjects/Keywords: Botany; Terrestrial and Aquatic Ecology
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APA ·
Chicago ·
MLA ·
Vancouver ·
CSE |
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Manager
APA (6th Edition):
Purintun, J. M. (2015). Floristic Inventory and Vegetation Analysis of Lands Adjacent to the Missouri River on the Lower Brule Sioux Reservation. (Masters Thesis). South Dakota State University. Retrieved from https://openprairie.sdstate.edu/etd/1770
Chicago Manual of Style (16th Edition):
Purintun, Jordan M. “Floristic Inventory and Vegetation Analysis of Lands Adjacent to the Missouri River on the Lower Brule Sioux Reservation.” 2015. Masters Thesis, South Dakota State University. Accessed February 26, 2021.
https://openprairie.sdstate.edu/etd/1770.
MLA Handbook (7th Edition):
Purintun, Jordan M. “Floristic Inventory and Vegetation Analysis of Lands Adjacent to the Missouri River on the Lower Brule Sioux Reservation.” 2015. Web. 26 Feb 2021.
Vancouver:
Purintun JM. Floristic Inventory and Vegetation Analysis of Lands Adjacent to the Missouri River on the Lower Brule Sioux Reservation. [Internet] [Masters thesis]. South Dakota State University; 2015. [cited 2021 Feb 26].
Available from: https://openprairie.sdstate.edu/etd/1770.
Council of Science Editors:
Purintun JM. Floristic Inventory and Vegetation Analysis of Lands Adjacent to the Missouri River on the Lower Brule Sioux Reservation. [Masters Thesis]. South Dakota State University; 2015. Available from: https://openprairie.sdstate.edu/etd/1770

College of William and Mary
6.
Blachman, Sara Aimee.
Modeling Phytoplankton Community Response to Nutrient Loading and Climate Change in A Shallow Temperate Estuary.
Degree: MS, Virginia Institute of Marine Science, 2016, College of William and Mary
URL: https://scholarworks.wm.edu/etd/1499449661
► Phytoplankton account for at least half of all primary production in estuarine waters and are at the center of biogeochemical cycles and material budgets.…
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▼ Phytoplankton account for at least half of all primary production in estuarine waters and are at the center of biogeochemical cycles and material budgets. Environmental managers use water column chlorophyll-a (chl-a) concentrations as a basic water quality indictor, as the problems of eutrophication and hypoxia are intrinsically linked to excessive phytoplankton growth. Evidence suggests that the distribution and frequency of harmful algal blooms may be increasing worldwide. For the most part, phytoplankton communities follow a standard seasonal pattern, with specific groups dominating the assemblage during the time of year when environmental conditions correspond to their requisites for growth. However, climate change will result in incremental but consistent shifts in some environmental factors known to affect phytoplankton production and biomass accumulation. Mean surface temperatures in North American mid-Atlantic coastal and estuarine regions are steadily rising, and the frequency and severity of drought and storm events are projected to fluctuate, potentially increasing the severity of extreme weather events. Anthropogenically-induced nutrient loading, especially from non-point sources, is one of the largest consistent contributors to coastal marine eutrophication. The consequences of changes in these environmental factors to estuarine ecosystems and phytoplankton community dynamics are unclear. Because different phytoplankton groups respond to environmental changes in distinctive ways, some classes thrive during periods of environmental stability and others at times of temporary or sustained disturbance. to predict how phytoplankton and therefore water quality might respond to changes in climate and land use, we built mathematical phytoplankton kinetics sub-models that differentiate phytoplankton groups using taxonomic classes with well-defined functional characteristics. Then we integrated them into a reduced-complexity estuarine ecosystem model. The sub-models were designed to simulate daily biomass of diatoms, dinoflagellates, cyanobacteria, and raphidophytes in the New River Estuary, NC. We calibrated and validated the model using data collected from 2007 – 2012 through the Aquatic Estuarine monitoring module of the Defense Coastal/Estuarine Research Program. The model was a relatively good predictor of total chl-a and primary production, and a fair predictor of group dynamics. The model was employed in heuristic simulations of changes in temperature, nutrient loading, and freshwater delivery to predict their effects on overall phytoplankton biomass, productivity, and community composition. Increases in temperature had a modest effect on mean daily simulated phytoplankton production and chl-a, but considerably decreased the relative abundance of diatoms and simultaneously increased the relative abundance of cyanobacteria. The seasonal phenology of phytoplankton abundance also shifted in response to increased temperatures: chl-a concentrations were larger in the winter and spring and smaller in the…
Subjects/Keywords: Marine Biology; Oceanography; Terrestrial and Aquatic Ecology
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❌
APA ·
Chicago ·
MLA ·
Vancouver ·
CSE |
Export
to Zotero / EndNote / Reference
Manager
APA (6th Edition):
Blachman, S. A. (2016). Modeling Phytoplankton Community Response to Nutrient Loading and Climate Change in A Shallow Temperate Estuary. (Masters Thesis). College of William and Mary. Retrieved from https://scholarworks.wm.edu/etd/1499449661
Chicago Manual of Style (16th Edition):
Blachman, Sara Aimee. “Modeling Phytoplankton Community Response to Nutrient Loading and Climate Change in A Shallow Temperate Estuary.” 2016. Masters Thesis, College of William and Mary. Accessed February 26, 2021.
https://scholarworks.wm.edu/etd/1499449661.
MLA Handbook (7th Edition):
Blachman, Sara Aimee. “Modeling Phytoplankton Community Response to Nutrient Loading and Climate Change in A Shallow Temperate Estuary.” 2016. Web. 26 Feb 2021.
Vancouver:
Blachman SA. Modeling Phytoplankton Community Response to Nutrient Loading and Climate Change in A Shallow Temperate Estuary. [Internet] [Masters thesis]. College of William and Mary; 2016. [cited 2021 Feb 26].
Available from: https://scholarworks.wm.edu/etd/1499449661.
Council of Science Editors:
Blachman SA. Modeling Phytoplankton Community Response to Nutrient Loading and Climate Change in A Shallow Temperate Estuary. [Masters Thesis]. College of William and Mary; 2016. Available from: https://scholarworks.wm.edu/etd/1499449661

College of William and Mary
7.
Armstrong, Christen Taylor.
Nitrogen Isotope Fractionation and Toxin Production during The Uptake of Micromolar Concentrations of Nitrate, Ammonium, and Urea By A Marine Dinoflagellate.
Degree: MS, Virginia Institute of Marine Science, 2017, College of William and Mary
URL: https://scholarworks.wm.edu/etd/1499449867
► Despite an increased global interest in harmful algal bloom (HAB) species and eutrophication, the relationship between nutrient sources and changes in species composition or…
(more)
▼ Despite an increased global interest in harmful algal bloom (HAB) species and eutrophication, the relationship between nutrient sources and changes in species composition or toxicity remains unclear. Stable isotopes are routinely used to identify and track nitrogen (N) sources to water bodies, as sources can be differentiated based on stable isotope values. While literature is available describing N fractionation by diatoms and coccolithophores, data are greatly lacking regarding isotope fractionation by dinoflagellates. Here we investigate the fractionation of nitrogen isotopes by saxitoxin-producing Alexandrium fundyense, to validate the use of the δ15N of particulate organic matter and identify the nitrogen source fueling a dinoflagellate bloom and its toxicity. The effects of N chemical form on isotope fractionation, toxin content, and toxicity, were investigated using isolates in single-N and mixed-N experiments. Growth on NO3-, NH4+, or urea, resulted in isotope fractionation of 2.761.48‰, 29.019.32‰, or 0.340.19‰, respectively, with the lowest cellular toxicity and toxin quotas reported during urea utilization. Toxin composition and growth rates, however, remained constant across all N treatments, showing no effects of NO3-, NH4+, or urea utilization. Alexandrium fundyense was then preconditioned to either NO3-, NH4+, or urea, and abruptly inoculated into mixed-N medium containing all three chemical forms. All treatments initially utilized NH4+ and urea upon inoculation into mixed medium, suggesting no effect of preconditioning. Cells only began utilizing NO3- after NH4+ decreased below 2-4 M in the medium. During the inhibition of NO3- uptake by NH4+ utilization, the cellular δ15N was at its lowest (-5‰), and through the course of the experiment, the δ15N continuously changed to mimic the isotope value of the most recent N source(s) being utilized. When utilizing multiple sources, the isotope signature of the cells fell between the signal of the two N sources. Together this suggests that in NO3- and urea rich environments, the 15NPOM would reliably look like the source or sources of nitrogen utilized, but that caution should be taken in NH4+ rich environments where the large value could lead to misinterpretation of the signal. Nutrients are only one factor influencing bloom dynamics, but information about the relative importance of natural or anthropogenic nutrients in the development and toxicity of bloom events is necessary to predict future shifts in phytoplankton species composition, density, and toxicity.
Subjects/Keywords: Marine Biology; Terrestrial and Aquatic Ecology
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APA ·
Chicago ·
MLA ·
Vancouver ·
CSE |
Export
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Manager
APA (6th Edition):
Armstrong, C. T. (2017). Nitrogen Isotope Fractionation and Toxin Production during The Uptake of Micromolar Concentrations of Nitrate, Ammonium, and Urea By A Marine Dinoflagellate. (Masters Thesis). College of William and Mary. Retrieved from https://scholarworks.wm.edu/etd/1499449867
Chicago Manual of Style (16th Edition):
Armstrong, Christen Taylor. “Nitrogen Isotope Fractionation and Toxin Production during The Uptake of Micromolar Concentrations of Nitrate, Ammonium, and Urea By A Marine Dinoflagellate.” 2017. Masters Thesis, College of William and Mary. Accessed February 26, 2021.
https://scholarworks.wm.edu/etd/1499449867.
MLA Handbook (7th Edition):
Armstrong, Christen Taylor. “Nitrogen Isotope Fractionation and Toxin Production during The Uptake of Micromolar Concentrations of Nitrate, Ammonium, and Urea By A Marine Dinoflagellate.” 2017. Web. 26 Feb 2021.
Vancouver:
Armstrong CT. Nitrogen Isotope Fractionation and Toxin Production during The Uptake of Micromolar Concentrations of Nitrate, Ammonium, and Urea By A Marine Dinoflagellate. [Internet] [Masters thesis]. College of William and Mary; 2017. [cited 2021 Feb 26].
Available from: https://scholarworks.wm.edu/etd/1499449867.
Council of Science Editors:
Armstrong CT. Nitrogen Isotope Fractionation and Toxin Production during The Uptake of Micromolar Concentrations of Nitrate, Ammonium, and Urea By A Marine Dinoflagellate. [Masters Thesis]. College of William and Mary; 2017. Available from: https://scholarworks.wm.edu/etd/1499449867

Edith Cowan University
8.
Choney, Gary.
The impact of Black swan (Cygnus atratus) grazing on the seagrass Halophila ovalis in the Lower Swan River estuary.
Degree: 2012, Edith Cowan University
URL: https://ro.ecu.edu.au/theses/446
► Grazing is an important ecosystem process, influencing community structure and rates of ecosystem processes. Although grazing on seagrasses is generally considered to be minor in…
(more)
▼ Grazing is an important ecosystem process, influencing community structure and rates of ecosystem processes. Although grazing on seagrasses is generally considered to be minor in many temperate regions of the world, waterfowl are often considered significant grazers in temperate lagoons and estuaries. This study examined spatial and temporal variation in swan abundance, grazing pressure and the impact grazing has on seagrass. Little is known on how grazing rates vary on larger water bodies in the southern hemisphere at different times of year and whether temporal changes in grazing rates affect the ability of seagrasses to tolerate grazing. The plant response to grazing may not be consistent seasonally, in light of recent terrestrial studies suggesting changes in environmental factors over a year such as light, temperature and nutrient supply can influence the ability of plants to cope with grazing. Furthermore, studies have suggested changes in sexual reproduction can be considered a trait to cope with grazing. However, very few studies have investigated this relationship, particularly in seagrasses. With these three main knowledge gaps in mind, this study examined grazing interactions between the black swan (Cygnus atratus) and the seagrass Halophila ovalis in a temperate, estuarine seagrass ecosystem, the Lower Swan River estuary, Western Australia. Firstly, spatial and temporal variation in black swan abundance was documented across 45 sites in four seasons (spring, summer, autumn and winter) and at two times of day. Further investigations sought to determine whether there were changes in grazing pressure over a year. This was conducted at three high “swan use” sites in each season. Finally, the strategies seagrasses use to cope with grazing, and how these vary temporally were assessed using an observational approach across a natural grazing gradient and experimental manipulations (simulated grazing). There was significant variation in black swan density among seasons, with the highest number of swans present during autumn (185 swans), intermediate numbers in summer (104 swans) and winter (80 swans) and the lowest in spring (53 swans). Swans may move to ephemeral wetlands during times of low swan abundance on the estuary. An analysis of the temporal variation in swan abundance on the surrounding wetlands on the Swan Coastal Plain does not show a consistent pattern of seasonal variation on the wetlands. Movement of black swans to ephemeral wetlands is likely to be due to a variety of factors including water height, food availability and the breeding needs of the black swan.
Subjects/Keywords: Western Australia; Terrestrial and Aquatic Ecology
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MLA ·
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APA (6th Edition):
Choney, G. (2012). The impact of Black swan (Cygnus atratus) grazing on the seagrass Halophila ovalis in the Lower Swan River estuary. (Thesis). Edith Cowan University. Retrieved from https://ro.ecu.edu.au/theses/446
Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation
Chicago Manual of Style (16th Edition):
Choney, Gary. “The impact of Black swan (Cygnus atratus) grazing on the seagrass Halophila ovalis in the Lower Swan River estuary.” 2012. Thesis, Edith Cowan University. Accessed February 26, 2021.
https://ro.ecu.edu.au/theses/446.
Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation
MLA Handbook (7th Edition):
Choney, Gary. “The impact of Black swan (Cygnus atratus) grazing on the seagrass Halophila ovalis in the Lower Swan River estuary.” 2012. Web. 26 Feb 2021.
Vancouver:
Choney G. The impact of Black swan (Cygnus atratus) grazing on the seagrass Halophila ovalis in the Lower Swan River estuary. [Internet] [Thesis]. Edith Cowan University; 2012. [cited 2021 Feb 26].
Available from: https://ro.ecu.edu.au/theses/446.
Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation
Council of Science Editors:
Choney G. The impact of Black swan (Cygnus atratus) grazing on the seagrass Halophila ovalis in the Lower Swan River estuary. [Thesis]. Edith Cowan University; 2012. Available from: https://ro.ecu.edu.au/theses/446
Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation

University of Southern Mississippi
9.
Fleming, Christopher.
Spatial Variation in Basal Resources and Trophic Position of Selected Fishes of the North-Central Gulf of Mexico.
Degree: MS, Coastal Sciences, Gulf Coast Research Laboratory, 2018, University of Southern Mississippi
URL: https://aquila.usm.edu/masters_theses/361
► The North-central Gulf of Mexico is a complex hydrologic environment with freshwater influx that varies on spatial and temporal scales. Freshwater input exerts influence…
(more)
▼ The North-central Gulf of Mexico is a complex hydrologic environment with freshwater influx that varies on spatial and temporal scales. Freshwater input exerts influence on the isotope values of organisms living in coastal ecosystems. The objectives of this study were to determine relationships between total length and isotope value, estimate basal resource usage and trophic position of target species from Mississippi Sound, reef, and pelagic environments, and identify differences and similarities in spatial patterns of collection. Muscle tissue samples were collected from October 2014 through September 2015. Stable isotope analysis identified a trophic gradient extending from nearshore to offshore, with d
13C values becoming enriched as distance from shore increased, while d
15N values decreased. Species from the Mississippi Sound exhibited varying degrees of habitat usage, with Red Drum being the most diverse, while Gafftopsail Catfish and Atlantic Sharpnose shark had more habitat specificity. This study presented evidence that freshwater inputs influenced the isotope values of reef fish species. d
15N values of Vermilion Snapper, Red Porgy, Red Snapper, and Tomtate were statistically higher near sources of freshwater input. Stable isotope data identified variable habitat usage in Cobia. Application of this knowledge when developing statistical models may help increase efficacy of management decisions.
Advisors/Committee Members: Kevin S. Dillon, Mark S. Peterson, Robert T. Leaf.
Subjects/Keywords: Marine Biology; Terrestrial and Aquatic Ecology
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APA ·
Chicago ·
MLA ·
Vancouver ·
CSE |
Export
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Manager
APA (6th Edition):
Fleming, C. (2018). Spatial Variation in Basal Resources and Trophic Position of Selected Fishes of the North-Central Gulf of Mexico. (Masters Thesis). University of Southern Mississippi. Retrieved from https://aquila.usm.edu/masters_theses/361
Chicago Manual of Style (16th Edition):
Fleming, Christopher. “Spatial Variation in Basal Resources and Trophic Position of Selected Fishes of the North-Central Gulf of Mexico.” 2018. Masters Thesis, University of Southern Mississippi. Accessed February 26, 2021.
https://aquila.usm.edu/masters_theses/361.
MLA Handbook (7th Edition):
Fleming, Christopher. “Spatial Variation in Basal Resources and Trophic Position of Selected Fishes of the North-Central Gulf of Mexico.” 2018. Web. 26 Feb 2021.
Vancouver:
Fleming C. Spatial Variation in Basal Resources and Trophic Position of Selected Fishes of the North-Central Gulf of Mexico. [Internet] [Masters thesis]. University of Southern Mississippi; 2018. [cited 2021 Feb 26].
Available from: https://aquila.usm.edu/masters_theses/361.
Council of Science Editors:
Fleming C. Spatial Variation in Basal Resources and Trophic Position of Selected Fishes of the North-Central Gulf of Mexico. [Masters Thesis]. University of Southern Mississippi; 2018. Available from: https://aquila.usm.edu/masters_theses/361

University of Maine
10.
Stevens, Justin R.
Response of Estuarine Fish Biomass to Restoration in the Penobscot River, Maine.
Degree: MS, Marine Biology, 2019, University of Maine
URL: https://digitalcommons.library.umaine.edu/etd/3043
► Diadromous fish require both freshwater and marine habitat to complete their life cycle. Dams restrict the movement between these habitats and as a result,…
(more)
▼ Diadromous fish require both freshwater and marine habitat to complete their life cycle. Dams restrict the movement between these habitats and as a result, many populations are historically low across their range. The Penobscot River is the second largest river in Maine and once had large populations of diadromous fish and it has been the focus of mainstem dam removals, dam passage improvements, and stocking with the goal of restoring those populations. Since 2012, NOAA Fisheries has conducted surveys of the Penobscot Estuary using mobile, multi-frequency echosounders (SIMRAD EK60 split-beam 38 and 120 kHz) combined with mid-water trawl surveys to construct a time series of fish distribution to assess this large-scale restoration. Target strength (TS; dB re m2), the log10 of the backscattering cross section (σbs; m2), is an important variable in fisheries acoustics because it is used to compute biological metrics such as biomass and fish density. TS is difficult to characterize due to its stochastic properties from variability in fish physiology, orientation, behavior, depth, and size. When an assemblage consists of multiple species or multiple size classes, assigning TS to the component species or size classes is difficult due to the inability to distinguish individual components in the composite distributions. We addressed these challenges by a unique combination of techniques to characterize TS in the Penobscot River Estuary, Maine. From trawl data, we determined the estuarine species assemblage was dominated by Clupeids and Osmerids. We used single target detection and echo tracking algorithms to isolate TS values from individual fish. Next, we applied an expectation–maximization algorithm to identify components of the mixed normal TS distribution based on fish total length (TL; cm) data from trawl surveys. Finally, we used ordinary least squares regression to estimate the parameters of TS = α log10 (TL) + β. Our final parameters, α = 31.0 (SE 0.84) and β = -79.5 (SE 0.90), were similar to published studies from these species. However, our slope and intercept were higher than studies from freshwater and lower than from marine systems. These results suggest that acoustic surveys in estuarine systems with mixed species assemblages and large salinity ranges may need to develop site specific relationships between TS and fish length. The combination of these methods is an example of a novel technique to derive reproducible TS estimates in mixed pelagic fish assemblages. We used system-specific parameters to compute biomass from acoustic survey data. We assessed seasonal estimates of biomass from 2012 to 2017 a period spanning pre-restoration (2012-2014) and post-restoration (2015-2017). Biomass varied with season and year and was generally greater in summer and in post-restoration years. Biomass in pre-restoration years ranged from 9,000 to 114,000 kg per survey and 11 of 45 (23%) surveys had biomass greater than 50,000 kg. Compared to post-restoration years ranged from 23,000 to 316,000 kg per survey and 34 of 43…
Advisors/Committee Members: Damian Brady, Gayle Zydlewski, J. Michael Jech.
Subjects/Keywords: Population Biology; Terrestrial and Aquatic Ecology
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❌
APA ·
Chicago ·
MLA ·
Vancouver ·
CSE |
Export
to Zotero / EndNote / Reference
Manager
APA (6th Edition):
Stevens, J. R. (2019). Response of Estuarine Fish Biomass to Restoration in the Penobscot River, Maine. (Masters Thesis). University of Maine. Retrieved from https://digitalcommons.library.umaine.edu/etd/3043
Chicago Manual of Style (16th Edition):
Stevens, Justin R. “Response of Estuarine Fish Biomass to Restoration in the Penobscot River, Maine.” 2019. Masters Thesis, University of Maine. Accessed February 26, 2021.
https://digitalcommons.library.umaine.edu/etd/3043.
MLA Handbook (7th Edition):
Stevens, Justin R. “Response of Estuarine Fish Biomass to Restoration in the Penobscot River, Maine.” 2019. Web. 26 Feb 2021.
Vancouver:
Stevens JR. Response of Estuarine Fish Biomass to Restoration in the Penobscot River, Maine. [Internet] [Masters thesis]. University of Maine; 2019. [cited 2021 Feb 26].
Available from: https://digitalcommons.library.umaine.edu/etd/3043.
Council of Science Editors:
Stevens JR. Response of Estuarine Fish Biomass to Restoration in the Penobscot River, Maine. [Masters Thesis]. University of Maine; 2019. Available from: https://digitalcommons.library.umaine.edu/etd/3043
11.
O'Brien, Anne Therese.
Ethical Relationships to Soil in the Anthropocene.
Degree: PhD, 2017, Australian Catholic University
URL: https://researchbank.acu.edu.au/theses/728
► While soil is central to human life and the flourishing of countless nonhumans, its importance is rarely acknowledged. Soil is often represented as lifeless,…
(more)
▼ While soil is central to human life and the flourishing of countless nonhumans, its importance is rarely acknowledged. Soil is often represented as lifeless, invisible or a substrate: part of the background to more important things. Its value is only publicly expressed when its functions break down, and even then, this rarely prompts an adequate response. Now as life on earth faces the climate crisis and the other anthropogenic planetary and localised perturbations, there is growing recognition that healthy soil ecosystems may help wider ecosystems cope. How can modern humans better care for and regenerate soil? What relationships can be disclosed, cultivated and strengthened in order to do this? The Anthropocene, as far as the soil is concerned, is a product of particular land use practices, ideologies, and protagonists, with some damaging soil far more than others. Some indigenous societies have cared for soils for millennia, while a growing number of regenerative practitioners are likewise developing responsive, skilful and caring working relationships with soil organisms. In this thesis, I examine contemporary practices of regenerative land stewardship that help build soil ecological integrity, using an interdisciplinary approach of interview and site based fieldwork, combined with theoretical reflection. Articulating principles of care for soil, I hope to contribute to the work of enabling transformative social change at the level of norms. The fieldwork examples ground the analysis in everyday realities of land stewards, who bear witness to both environmental devastation and ecologically robust relationships. After considering the meaning, science and practice of regenerative land stewardship, I use critical theory to consider how mechanistic science, instrumental reason, and technicity have contributed to the exploitation of soil. I consider the ways in which dominant management techniques and technologies have been naturalised, presupposing the ideal of control. I contrast this with more provisional, responsive approaches of pursuing plural ends such as Wendell Berry’s concept of kindly use. Using field work case studies, I examine how practitioners learn to care for soil, involving new ways of seeing, recognition, and receptivity, monitoring signs of soil health such as soil aggregate texture, and attempting to do justice to new matters of concern as they arise. Such work builds ecological relationship in the course of everyday work, rendering soil ecosystems not only means, but also ends in themselves, and also making for a less alienated form of work.
Subjects/Keywords: Soil Science; Terrestrial and Aquatic Ecology
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APA ·
Chicago ·
MLA ·
Vancouver ·
CSE |
Export
to Zotero / EndNote / Reference
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APA (6th Edition):
O'Brien, A. T. (2017). Ethical Relationships to Soil in the Anthropocene. (Doctoral Dissertation). Australian Catholic University. Retrieved from https://researchbank.acu.edu.au/theses/728
Chicago Manual of Style (16th Edition):
O'Brien, Anne Therese. “Ethical Relationships to Soil in the Anthropocene.” 2017. Doctoral Dissertation, Australian Catholic University. Accessed February 26, 2021.
https://researchbank.acu.edu.au/theses/728.
MLA Handbook (7th Edition):
O'Brien, Anne Therese. “Ethical Relationships to Soil in the Anthropocene.” 2017. Web. 26 Feb 2021.
Vancouver:
O'Brien AT. Ethical Relationships to Soil in the Anthropocene. [Internet] [Doctoral dissertation]. Australian Catholic University; 2017. [cited 2021 Feb 26].
Available from: https://researchbank.acu.edu.au/theses/728.
Council of Science Editors:
O'Brien AT. Ethical Relationships to Soil in the Anthropocene. [Doctoral Dissertation]. Australian Catholic University; 2017. Available from: https://researchbank.acu.edu.au/theses/728
12.
Price, Henry.
The source of excess nutrients to Pine Draw, Turnbull National Wildlife Refuge.
Degree: MS, Biology, 2018, Eastern Washington University
URL: https://dc.ewu.edu/theses/518
► Nitrogen and phosphorus are the most common limiting nutrients for biological activity in freshwater ecosystems. Applying inorganic nitrogen fertilizer has increased crop productivity but…
(more)
▼ Nitrogen and phosphorus are the most common limiting nutrients for biological activity in freshwater ecosystems. Applying inorganic nitrogen fertilizer has increased crop productivity but caused excess nitrogen inputs to the hydrosphere. Nitrate contamination is a worldwide environmental problem. The fate of nitrogen in ecosystems is variable based on land type and hydrogeological interactions. Excess nitrogen can be retained in soils, sequestered in stream organisms, denitrified or transported downstream. The goals of this study were to monitor nitrogen concentrations in Pine Draw, Turnbull National Wildlife Refuge (TNWR), Washington, U.S.A., and to determine the source of nitrogen loading. Pine Draw is unique because it’s located in the channeled scablands and has minimal anthropogenic impacts but has experienced excess nutrients for at least 20 years. Symptoms of nutrient loading observed on TNWR are an overabundance of primary producers, decreased biological diversity, extensive algal blooms, low dissolved oxygen, episodic anoxia, loss of vascular plant life and fish kills. I sampled nine surface water, three groundwater inputs on Pine Draw and three surface water sites on Philleo drainage monthly from October 2016 to October 2017. I documented nitrate+nitrite (NO3-N), ammonium (NH4+-N) and phosphate (PO43-) concentrations as well as specific conductance, conductivity, dissolved oxygen, temperature, pH and discharge in both watersheds for the duration of the sampling period. We used stable isotope ratios of oxygen and nitrogen in nitrate to determine that the source of nitrogen to Philleo drainage, groundwater and Pine Draw was a combination of ammonium fertilizer and soil nitrate varying seasonally based on water source.
Subjects/Keywords: Environmental Monitoring; Terrestrial and Aquatic Ecology
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❌
APA ·
Chicago ·
MLA ·
Vancouver ·
CSE |
Export
to Zotero / EndNote / Reference
Manager
APA (6th Edition):
Price, H. (2018). The source of excess nutrients to Pine Draw, Turnbull National Wildlife Refuge. (Thesis). Eastern Washington University. Retrieved from https://dc.ewu.edu/theses/518
Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation
Chicago Manual of Style (16th Edition):
Price, Henry. “The source of excess nutrients to Pine Draw, Turnbull National Wildlife Refuge.” 2018. Thesis, Eastern Washington University. Accessed February 26, 2021.
https://dc.ewu.edu/theses/518.
Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation
MLA Handbook (7th Edition):
Price, Henry. “The source of excess nutrients to Pine Draw, Turnbull National Wildlife Refuge.” 2018. Web. 26 Feb 2021.
Vancouver:
Price H. The source of excess nutrients to Pine Draw, Turnbull National Wildlife Refuge. [Internet] [Thesis]. Eastern Washington University; 2018. [cited 2021 Feb 26].
Available from: https://dc.ewu.edu/theses/518.
Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation
Council of Science Editors:
Price H. The source of excess nutrients to Pine Draw, Turnbull National Wildlife Refuge. [Thesis]. Eastern Washington University; 2018. Available from: https://dc.ewu.edu/theses/518
Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation
13.
Lamm, Jaren F.
Targeted short-term nutrient reduction to manage Ventenata dubia an invasive winter annual grass: soil and plant responses.
Degree: MS, Biology, 2019, Eastern Washington University
URL: https://dc.ewu.edu/theses/567
► Invasive winter annual grasses, IWAGs, have degraded extensive ecosystems around the world and continue to invade new ones yearly. IWAGs readily form large monocultures…
(more)
▼ Invasive winter annual grasses, IWAGs, have degraded extensive ecosystems around the world and continue to invade new ones yearly. IWAGs readily form large monocultures or near monocultures, thus management and restoration goals largely focus on maintaining or increasing plant diversity in impacted ecosystems. Unfortunately, common management methods also reduce native plant diversity and harm the soil microbiome. These effects require additional measures to be taken, like reseeding, and plant diversity is still usually well below remnant targets. Early season short-term nutrient reduction to manage IWAGs is largely unexplored and would potentially decrease IWAG abundance, active earlier than most plants, but impact later season species less. Low rates of labile carbon, as sucrose, were applied to soils in a Pacific Northwest semi-arid grassland in early spring to stimulate microbial growth and temporarily reduce nutrient availability to the IWAG Ventenata dubia. Inorganic nitrogen was tracked throughout the experiment and plant and soil microbial community changes were determined at the end of the growing season. Labile carbon application reduced nitrogen at the beginning of the year, but effects did not persist to mid may when most plants were still active and soil moisture was not limiting. Treatments reduced V.dubia cover, per area seed production, and seed mass with no corresponding impact on perennial or other annual plants, except at the highest application rate when annual cover was reduced by 2%. The soil microbial community, determined via PLFA and NLFA analysis, was largely unchanged at the end of the season with slightly higher bacterial biomass and, importantly, no reduction in AMF abundance. These results suggest that this method has few negative impacts on the plant and soil community aside from a reduction in V.dubia cover and possibly its seed bank. This short-term nutrient reduction method has the potential to not only target IWAGs, active early, but also any non-native plants targeted for management that are active earlier or later than the native plant community.
Subjects/Keywords: Soil Science; Terrestrial and Aquatic Ecology
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❌
APA ·
Chicago ·
MLA ·
Vancouver ·
CSE |
Export
to Zotero / EndNote / Reference
Manager
APA (6th Edition):
Lamm, J. F. (2019). Targeted short-term nutrient reduction to manage Ventenata dubia an invasive winter annual grass: soil and plant responses. (Thesis). Eastern Washington University. Retrieved from https://dc.ewu.edu/theses/567
Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation
Chicago Manual of Style (16th Edition):
Lamm, Jaren F. “Targeted short-term nutrient reduction to manage Ventenata dubia an invasive winter annual grass: soil and plant responses.” 2019. Thesis, Eastern Washington University. Accessed February 26, 2021.
https://dc.ewu.edu/theses/567.
Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation
MLA Handbook (7th Edition):
Lamm, Jaren F. “Targeted short-term nutrient reduction to manage Ventenata dubia an invasive winter annual grass: soil and plant responses.” 2019. Web. 26 Feb 2021.
Vancouver:
Lamm JF. Targeted short-term nutrient reduction to manage Ventenata dubia an invasive winter annual grass: soil and plant responses. [Internet] [Thesis]. Eastern Washington University; 2019. [cited 2021 Feb 26].
Available from: https://dc.ewu.edu/theses/567.
Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation
Council of Science Editors:
Lamm JF. Targeted short-term nutrient reduction to manage Ventenata dubia an invasive winter annual grass: soil and plant responses. [Thesis]. Eastern Washington University; 2019. Available from: https://dc.ewu.edu/theses/567
Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation

University of Colorado
14.
Shoaei, Farrokh.
The Experimental Investigation of the Effect of Unsteady Obstacle Wakes on Stirring and Mixing of Gamete Filaments.
Degree: PhD, 2015, University of Colorado
URL: https://scholar.colorado.edu/cven_gradetds/150
► One of the most common methods of reproduction in the sea is broadcast spawning where marine invertebrates release eggs and sperm into the ambient flow…
(more)
▼ One of the most common methods of reproduction in the sea is broadcast spawning where marine invertebrates release eggs and sperm into the ambient flow and fertilization occurs externally. Gamete coalescence at large scales is dominated by fluid stirring, and may be influenced by the presence of flow obstructions (e.g., coral heads, bed topography). The effect of turbulent wake behind a round obstacle on the second-order reaction between two initially distant scalars has been investigated by series of planar laser-induced fluorescence experiments. The scalars are released continuously, and are separated from each other by a lateral distance that initially impedes the reaction. The direct effect of the wake on mixing enhancement is determined by comparing segregation coefficient for cases with and without the cylinder wake. We measured mixing statistics for variety of flow regimes, streamwise locations, and scalar release geometries. This study suggests that the presence of turbulent obstacle wakes in spawning regions may substantially raise the efficacy of external fertilization. In addition, the effect of viscosity and non-Newtonian (shear-thinning) rheology on mixing and reaction between two initially distant scalars has been investigated. In this case, the ambient flow is pure water, but the scalar solutions include Xanthan gum to alter their rheology. Results indicate that mixing and reaction rates in the low-Damkohler limit between the two scalars plumes increase with the increase in viscosity of the scalars. The results of this study have broad implications for biological and ecological mixing processes involving now-Newtonian fluids.
Advisors/Committee Members: John Crimaldi, Harihar Rajaram, Roseanna Neupauer, Peter Hamlington, Joseph Kasprzyk.
Subjects/Keywords: Civil Engineering; Oceanography; Terrestrial and Aquatic Ecology
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APA ·
Chicago ·
MLA ·
Vancouver ·
CSE |
Export
to Zotero / EndNote / Reference
Manager
APA (6th Edition):
Shoaei, F. (2015). The Experimental Investigation of the Effect of Unsteady Obstacle Wakes on Stirring and Mixing of Gamete Filaments. (Doctoral Dissertation). University of Colorado. Retrieved from https://scholar.colorado.edu/cven_gradetds/150
Chicago Manual of Style (16th Edition):
Shoaei, Farrokh. “The Experimental Investigation of the Effect of Unsteady Obstacle Wakes on Stirring and Mixing of Gamete Filaments.” 2015. Doctoral Dissertation, University of Colorado. Accessed February 26, 2021.
https://scholar.colorado.edu/cven_gradetds/150.
MLA Handbook (7th Edition):
Shoaei, Farrokh. “The Experimental Investigation of the Effect of Unsteady Obstacle Wakes on Stirring and Mixing of Gamete Filaments.” 2015. Web. 26 Feb 2021.
Vancouver:
Shoaei F. The Experimental Investigation of the Effect of Unsteady Obstacle Wakes on Stirring and Mixing of Gamete Filaments. [Internet] [Doctoral dissertation]. University of Colorado; 2015. [cited 2021 Feb 26].
Available from: https://scholar.colorado.edu/cven_gradetds/150.
Council of Science Editors:
Shoaei F. The Experimental Investigation of the Effect of Unsteady Obstacle Wakes on Stirring and Mixing of Gamete Filaments. [Doctoral Dissertation]. University of Colorado; 2015. Available from: https://scholar.colorado.edu/cven_gradetds/150

Wilfrid Laurier University
15.
Marshall, Daniel.
Quantifying relationships between phosphorus availability and mycorrhizal associations in wetland plants.
Degree: 2017, Wilfrid Laurier University
URL: https://scholars.wlu.ca/etd/1931
► Increasing evidence indicates that plant community structure and therefore ecosystem function are mediated by below-ground fungal communities that form intracellular associations with plant roots called…
(more)
▼ Increasing evidence indicates that plant community structure and therefore ecosystem function are mediated by below-ground fungal communities that form intracellular associations with plant roots called mycorrhizal associations. Arbuscular mycorrhizal fungi (AMF) are a type of mycorrhiza that colonize the plant host intracellularly but maintain hyphae outside the root cell for resource acquisition. The importance and function of AMF associations are well-documented in terrestrial ecosystems, but are less understood in aquatic or semi-aquatic systems. Phosphorus availability is the primary factor influencing mycorrhizal colonization and growth in terrestrial soils, with phosphorus-abundant soils leading to a decrease in mycorrhizal growth. However, the relationship between arbuscular mycorrhizal colonization and phosphorus supply in wetland systems is not well understood. Previous studies have examined this relationship, but have been limited by methodology and have indicated the need for studies closely mimicking natural conditions. To address this need, a field-based study was performed examining the mycorrhizal colonization of wetland plants growing in a natural wetland. Since field studies allow for only limited isolation and control of variables, a greenhouse study was also performed to isolate the impacts of phosphorus on mycorrhizal colonization in wetland plants. This study showed that phosphorus concentrations between 10 and 30 µg/L PO4-P are sufficient to alter mycorrhizal colonization in wetland plants, but the responses are species-specific. This variable impact on mycorrhizal colonization could induce species-specific responses in wetland plants, leading to shifts in community composition of wetland vegetation and ecosystem functioning.
Subjects/Keywords: Integrative Biology; Terrestrial and Aquatic Ecology
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❌
APA ·
Chicago ·
MLA ·
Vancouver ·
CSE |
Export
to Zotero / EndNote / Reference
Manager
APA (6th Edition):
Marshall, D. (2017). Quantifying relationships between phosphorus availability and mycorrhizal associations in wetland plants. (Thesis). Wilfrid Laurier University. Retrieved from https://scholars.wlu.ca/etd/1931
Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation
Chicago Manual of Style (16th Edition):
Marshall, Daniel. “Quantifying relationships between phosphorus availability and mycorrhizal associations in wetland plants.” 2017. Thesis, Wilfrid Laurier University. Accessed February 26, 2021.
https://scholars.wlu.ca/etd/1931.
Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation
MLA Handbook (7th Edition):
Marshall, Daniel. “Quantifying relationships between phosphorus availability and mycorrhizal associations in wetland plants.” 2017. Web. 26 Feb 2021.
Vancouver:
Marshall D. Quantifying relationships between phosphorus availability and mycorrhizal associations in wetland plants. [Internet] [Thesis]. Wilfrid Laurier University; 2017. [cited 2021 Feb 26].
Available from: https://scholars.wlu.ca/etd/1931.
Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation
Council of Science Editors:
Marshall D. Quantifying relationships between phosphorus availability and mycorrhizal associations in wetland plants. [Thesis]. Wilfrid Laurier University; 2017. Available from: https://scholars.wlu.ca/etd/1931
Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation

University of Nevada – Las Vegas
16.
Mellor, Alicia.
Larval-Ant Interactions in the Mojave Desert: Communication Brings Us Together.
Degree: MS, Life Sciences, 2018, University of Nevada – Las Vegas
URL: https://digitalscholarship.unlv.edu/thesesdissertations/3291
► Butterflies are a diverse and essential group of pollinators whose abundance is predominantly determined by growth and survival of their larvae. In the family…
(more)
▼ Butterflies are a diverse and essential group of pollinators whose abundance is predominantly determined by growth and survival of their larvae. In the family Lycaenidae, many species participate in a larval-ant mutualism where ants feed on nutrient-rich nectar produced by larvae and, in turn, protect those larvae from predators. Emerging evidence indicates larval scent in the form of cuticular hydrocarbons (CHCs), not nectar production, drives this interaction. This study takes two approaches to investigate CHCs as the driver behind the larval-ant mutualism in three butterfly species native to southern Nevada: Euphilotes bernardino martini (Martin’s blue), Brephidium exilis (western pygmy blue), and Euphilotes ancilla (Rocky Mountain dotted blue). First, behavioral assays are conducted to investigate larval-ant interactions in early and late larval instars both with live larvae and beads coated in larval extract. Second, the general composition of hydrocarbons found on the larval cuticles of these mutualist species is identified along with those from four species of attendant ants (Forelius pruinosus, Camponotus spp, Crematogaster mormonum, and Linepithema humile) to determine how varying CHC composition may be implicated in initiating and maintaining this important mutualism. In addition, this study addresses the novel hypothesis that early instar larvae produce a simple CHC suite to avoid ant aggression and then, in late instars, switch to producing a complex CHC suite that encourages ant interaction. This study finds partial support for CHC overlap in mutualist larvae and ants but does not find support for a developmental shift in CHC production.
Advisors/Committee Members: Daniel Thompson, Allen Gibbs, Javier Rodriguez, Ronald Gary.
Subjects/Keywords: Environmental Sciences; Terrestrial and Aquatic Ecology
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APA (6th Edition):
Mellor, A. (2018). Larval-Ant Interactions in the Mojave Desert: Communication Brings Us Together. (Masters Thesis). University of Nevada – Las Vegas. Retrieved from https://digitalscholarship.unlv.edu/thesesdissertations/3291
Chicago Manual of Style (16th Edition):
Mellor, Alicia. “Larval-Ant Interactions in the Mojave Desert: Communication Brings Us Together.” 2018. Masters Thesis, University of Nevada – Las Vegas. Accessed February 26, 2021.
https://digitalscholarship.unlv.edu/thesesdissertations/3291.
MLA Handbook (7th Edition):
Mellor, Alicia. “Larval-Ant Interactions in the Mojave Desert: Communication Brings Us Together.” 2018. Web. 26 Feb 2021.
Vancouver:
Mellor A. Larval-Ant Interactions in the Mojave Desert: Communication Brings Us Together. [Internet] [Masters thesis]. University of Nevada – Las Vegas; 2018. [cited 2021 Feb 26].
Available from: https://digitalscholarship.unlv.edu/thesesdissertations/3291.
Council of Science Editors:
Mellor A. Larval-Ant Interactions in the Mojave Desert: Communication Brings Us Together. [Masters Thesis]. University of Nevada – Las Vegas; 2018. Available from: https://digitalscholarship.unlv.edu/thesesdissertations/3291

University of Nevada – Las Vegas
17.
Gentilcore, Dominic M.
Mojave Desert Plant Community Long-Term Response to Disturbance.
Degree: PhD, Life Sciences, 2019, University of Nevada – Las Vegas
URL: https://digitalscholarship.unlv.edu/thesesdissertations/3804
► All vegetation communities have been shaped by disturbances. This dissertation consists of three separate chapters: Blackbrush (Coleogyne ramosissima) natural regeneration in the Great Basin-Mojave…
(more)
▼ All vegetation communities have been shaped by disturbances. This dissertation consists of three separate chapters: Blackbrush (Coleogyne ramosissima) natural regeneration in the Great Basin-Mojave Desert Transition Zone on two fires, Long-term Response to Fire in Eastern Mojave Desert semi-arid shrubland communities, and an Annotated Checklist of Gold Butte National Monument in the Mojave-Colorado Plateau Transition Zone. The section on blackbrush natural regeneration was a long-term dataset from two fires in Basin and Range National Monument that burned in 2008 with monitoring events in 2009, 2010, 2011, 2018 and 2019. The monitoring documented some of the strongest post-fire regeneration for the paleoendemic Coleogyne. It established as seedlings the first year following fire and grew to dominate the burned area over the next decade, reaching 11% total cover. The fire chronosequence included permanent plots on 31 burned areas across the Eastern Mojave Desert that burned from 1980-2006 and were previously monitored from 2007—2009, and then remonitored in 2016. It documents long-term change in creosote bush (Larrea tridentata) and Coleogyne shrubland communities. An Annotated Checklist of Gold Butte National Monument is a landscape scale description of the vegetation communities and diversity at one of the country’s newest national monuments. It verified 676 vouchered vascular plant taxa from 84 families that occurred within the monument’s boundaries, including Nevada state records for Cutler’s jointfir (Ephedra cutleri) and Utah knotweed (Polygonum utahense). These three chapters relate to the description of Mojave Desert plant communities and their successional responses following disturbance. The often slow response of desert plant communities and long-lived shrubs makes them difficult to monitor. The strength of the data come from study designs with substantial replication of disturbance events within the area and repeated long-term permanent plots which are able to describe vegetation change occurring over decades. This dissertation will expand on existing knowledge about long-term vegetation recovery and floristic composition in the Mojave Desert.
Advisors/Committee Members: Scott Abella, Jacimaria Batista, Dale Devitt, Stanley Smith, Llo Stark.
Subjects/Keywords: Biology; Environmental Sciences; Terrestrial and Aquatic Ecology
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APA (6th Edition):
Gentilcore, D. M. (2019). Mojave Desert Plant Community Long-Term Response to Disturbance. (Doctoral Dissertation). University of Nevada – Las Vegas. Retrieved from https://digitalscholarship.unlv.edu/thesesdissertations/3804
Chicago Manual of Style (16th Edition):
Gentilcore, Dominic M. “Mojave Desert Plant Community Long-Term Response to Disturbance.” 2019. Doctoral Dissertation, University of Nevada – Las Vegas. Accessed February 26, 2021.
https://digitalscholarship.unlv.edu/thesesdissertations/3804.
MLA Handbook (7th Edition):
Gentilcore, Dominic M. “Mojave Desert Plant Community Long-Term Response to Disturbance.” 2019. Web. 26 Feb 2021.
Vancouver:
Gentilcore DM. Mojave Desert Plant Community Long-Term Response to Disturbance. [Internet] [Doctoral dissertation]. University of Nevada – Las Vegas; 2019. [cited 2021 Feb 26].
Available from: https://digitalscholarship.unlv.edu/thesesdissertations/3804.
Council of Science Editors:
Gentilcore DM. Mojave Desert Plant Community Long-Term Response to Disturbance. [Doctoral Dissertation]. University of Nevada – Las Vegas; 2019. Available from: https://digitalscholarship.unlv.edu/thesesdissertations/3804

University of Nevada – Las Vegas
18.
Balogh, Mary Amanda.
Mojave Desert Ecosystem Recovery: Potency of Biotic and Abiotic Restoration Methods in Low Elevation Plant Communities.
Degree: MS, Life Sciences, 2019, University of Nevada – Las Vegas
URL: https://digitalscholarship.unlv.edu/thesesdissertations/3781
► The historic and current state of land in the Mojave Desert, including land managed by the National Park Service with fundamental goals of natural…
(more)
▼ The historic and current state of land in the Mojave Desert, including land managed by the National Park Service with fundamental goals of natural resource conservation and preservation, been severely degraded by a variety of anthropogenic disturbances. Due to increasingly sporadic and unpredictable precipitation patterns, land managers struggle to implement restoration projects with high success rates and are resource-limited for post-treatment monitoring. In this study, I examined success rates of biotic (outplanting, seeding) and abiotic (soil manipulation, vertical mulch) restoration treatments on various disturbance types in the creosote-bursage (Larrea tridentata-Ambrosia dumosa), blackbrush (Coleogyne ramosissima), and Joshua tree woodland (Yucca brevifolia) plant communities. Sites were surveyed in springs of 2018 and 2019 for annual and perennial plant species richness, percent cover, and perennial density to determine the effect size between unrestored, treatment, and reference (undisturbed) plot types. Sites were compared to determine what restoration treatment is most successful based on plant community, disturbance type, and the time since restoration or disturbance. Both biotic and abiotic treatments typically exhibited positive rather than negative restoration responses. Biotic treatments tended to have a more positive restoration success response than abiotic treatments. A large number of perennial effects were sensed while annual effects were often undetected. This study aims to provide evidence-based decision tools for land managers to choose restoration methods in an ecologically and economically effective manner.
Advisors/Committee Members: Scott Abella, Matthew Petrie, Stanley Smith, Haroon Stephen.
Subjects/Keywords: Environmental Sciences; Terrestrial and Aquatic Ecology
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APA ·
Chicago ·
MLA ·
Vancouver ·
CSE |
Export
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Manager
APA (6th Edition):
Balogh, M. A. (2019). Mojave Desert Ecosystem Recovery: Potency of Biotic and Abiotic Restoration Methods in Low Elevation Plant Communities. (Masters Thesis). University of Nevada – Las Vegas. Retrieved from https://digitalscholarship.unlv.edu/thesesdissertations/3781
Chicago Manual of Style (16th Edition):
Balogh, Mary Amanda. “Mojave Desert Ecosystem Recovery: Potency of Biotic and Abiotic Restoration Methods in Low Elevation Plant Communities.” 2019. Masters Thesis, University of Nevada – Las Vegas. Accessed February 26, 2021.
https://digitalscholarship.unlv.edu/thesesdissertations/3781.
MLA Handbook (7th Edition):
Balogh, Mary Amanda. “Mojave Desert Ecosystem Recovery: Potency of Biotic and Abiotic Restoration Methods in Low Elevation Plant Communities.” 2019. Web. 26 Feb 2021.
Vancouver:
Balogh MA. Mojave Desert Ecosystem Recovery: Potency of Biotic and Abiotic Restoration Methods in Low Elevation Plant Communities. [Internet] [Masters thesis]. University of Nevada – Las Vegas; 2019. [cited 2021 Feb 26].
Available from: https://digitalscholarship.unlv.edu/thesesdissertations/3781.
Council of Science Editors:
Balogh MA. Mojave Desert Ecosystem Recovery: Potency of Biotic and Abiotic Restoration Methods in Low Elevation Plant Communities. [Masters Thesis]. University of Nevada – Las Vegas; 2019. Available from: https://digitalscholarship.unlv.edu/thesesdissertations/3781

Eastern Illinois University
19.
West, John Leon.
Short-Term Responses of Fish Assemblages to Habitat Restoration in a Small Midwestern Stream.
Degree: MS, Biological Sciences, 2013, Eastern Illinois University
URL: https://thekeep.eiu.edu/theses/1186
► Recent efforts to restore stream habitat have become a common practice, yet evaluations of biotic responses to these practices are not as common. I…
(more)
▼ Recent efforts to restore stream habitat have become a common practice, yet evaluations of biotic responses to these practices are not as common. I evaluated fish assemblage response to restoration in a reach of Kickapoo Creek, a fourth order stream southwest of Charleston, Illinois. Restoration included 446 meters of bank stabilization, pool scouring keys, and the creation of two artificial riffles. To have a representation of pre-restoration fish assemblages, I sampled four stream reaches of Kickapoo Creek twice before construction of habitat restoration: two control reaches (upstream and downstream) and two restored reaches within a 0.5 km restoration stretch (upstream and downstream). To assess the effect of instream restoration on fish assemblages, I compared fish assemblages before, during, and after habitat restoration. Additionally, to assess the impact of season on fish assemblage I compared spring and fall samples. To assess the changes in habitat as a function of restoration I estimated habitat using the Qualitative Habitat Evaluation Index (QHEI) annually. Control and restored sites were sampled twice annually (spring and fall) beginning September 2009 through September 2011 with a six person crew sampling all four sites using an AC electric seine. Then I used DC electrofishing probes in a 30 meter long pool that had become too deep to sample by the 3
rd sample period. Index of Biotic Integrity scores were calculated and compared between the sites and seasons. Multidimensional scaling based on Bray-Curtis Similarity, Similar Percentages (SIMPER), and Indicator Species Analysis, were used to compare assemblages before, during, and after habitat restoration. T-tests were used to compare relative density of five fish families, tolerance levels, and habitat specialists before and after restoration. A total of 24.88 hours of sampling revealed 48,109 individuals from 45 different species from 11 different families. Most fish were from the families
Cyprinidae (89.7%),
Percidae (3.3%),
Centrarchidae (2.8%),
Catostomidae (2.1 %), and
Ictaluridae (1.6%). Fall samples were found to have significantly higher relative density (CPUE) (2262.5fish/hr) compared to spring (1237.8fish/hr) along with eleven unique species captured in the fall compared to five in the spring. Habitat changed in both the restored sites as well as the control sites after habitat restoration with the restored sites having an increased QHEI score with deeper pools and more riffle area. A significant change for
Cyprinid species occurred after habitat restoration with most species increasing. Similarity Percentages (SIMPER) revealed changes in percentage of the 5 minnow species Bluntnose Minnow (
Pimephales notatus)
, Spotfin Shiner (
Cyprinella spiloptera)
, Silverjaw Minnow (
Ericymba buccatus)
, Sand Shiner (
Notropis stramineus)
, and Central Stoneroller (
Campostoma anomalum)
during and after…
Advisors/Committee Members: Robert E. Colombo, Jeffrey R. Laursen, Charles L. Pederson.
Subjects/Keywords: Aquaculture and Fisheries; Terrestrial and Aquatic Ecology
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APA ·
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MLA ·
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APA (6th Edition):
West, J. L. (2013). Short-Term Responses of Fish Assemblages to Habitat Restoration in a Small Midwestern Stream. (Masters Thesis). Eastern Illinois University. Retrieved from https://thekeep.eiu.edu/theses/1186
Chicago Manual of Style (16th Edition):
West, John Leon. “Short-Term Responses of Fish Assemblages to Habitat Restoration in a Small Midwestern Stream.” 2013. Masters Thesis, Eastern Illinois University. Accessed February 26, 2021.
https://thekeep.eiu.edu/theses/1186.
MLA Handbook (7th Edition):
West, John Leon. “Short-Term Responses of Fish Assemblages to Habitat Restoration in a Small Midwestern Stream.” 2013. Web. 26 Feb 2021.
Vancouver:
West JL. Short-Term Responses of Fish Assemblages to Habitat Restoration in a Small Midwestern Stream. [Internet] [Masters thesis]. Eastern Illinois University; 2013. [cited 2021 Feb 26].
Available from: https://thekeep.eiu.edu/theses/1186.
Council of Science Editors:
West JL. Short-Term Responses of Fish Assemblages to Habitat Restoration in a Small Midwestern Stream. [Masters Thesis]. Eastern Illinois University; 2013. Available from: https://thekeep.eiu.edu/theses/1186

Eastern Illinois University
20.
Duffin, Kirstin I.
The Functional Role of Leaf Nutrients in an Old-Field Successional Community.
Degree: MS, 2015, Eastern Illinois University
URL: https://thekeep.eiu.edu/theses/2375
► In functional ecology, traits that capture aspects of plant performance are used to understand how organisms interact with their environment. Leaf nutrients are an…
(more)
▼ In functional
ecology, traits that capture aspects of plant performance are used to understand how organisms interact with their environment. Leaf nutrients are an example of a functional trait that directly links to plant metabolic processes and therefore may describe plant assemblage dynamics. Multivariate leaf nutrient analyses may be used with other functional traits to understand ecological strategies because they are a direct measure of leaf metabolic processes and can describe nuances in plant allocation patterns. In this thesis, I explored (1) whether a suite of leaf nutrients (carbon, nitrogen, phosphorus, potassium, calcium, and magnesium) was related to plant growth form (forb, graminoid, or woody plant), species origin (native or exotic), or invasiveness (invasive or non-invasive), (2) how these nutrients were associated across species and whether these relationships were different among species' groups, and (3) how leaf nutrients related to Westoby's leaf-height-seed (LHS) scheme and to a successional gradient.
Healthy, mature leaves were taken from 122 species across a wide range of growth forms in a mesic continental community of successional fields and young and old-growth oak-hickory forests in New Jersey, USA. Multivariate analyses of leaf nutrients by growth form, origin, and invasiveness were conducted, as well as correlations of leaf nutrients by growth form and with specific leaf area (SLA), maximum height, seed mass, and peak successional year. The primary factor in variation of leaf nutrient patterns was growth form. Forbs had the strongest nutrient associations and had greater levels of leaf macronutrients compared with woody and graminoid species, which had higher amounts of foliar carbon. After distinguishing leaf nutrient allocation strategy by growth form, there were minimal relationships between leaf nutrients and plant origin and invasiveness. SLA and seed mass, but not height or peak successional year, were correlated with leaf nutrients of some growth forms.
In community level studies, comparisons should be made by plant growth form or analyses will yield spurious results. While the focus of the literature thus far has been on carbon and nitrogen, understanding the relationships with other leaf nutrients will help describe the nuances of tradeoffs in plant growth strategies. This understanding will inform restoration
ecology of successional communities.
Advisors/Committee Members: Scott J. Meiners.
Subjects/Keywords: Botany; Plant Biology; Terrestrial and Aquatic Ecology
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APA ·
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MLA ·
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CSE |
Export
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Manager
APA (6th Edition):
Duffin, K. I. (2015). The Functional Role of Leaf Nutrients in an Old-Field Successional Community. (Masters Thesis). Eastern Illinois University. Retrieved from https://thekeep.eiu.edu/theses/2375
Chicago Manual of Style (16th Edition):
Duffin, Kirstin I. “The Functional Role of Leaf Nutrients in an Old-Field Successional Community.” 2015. Masters Thesis, Eastern Illinois University. Accessed February 26, 2021.
https://thekeep.eiu.edu/theses/2375.
MLA Handbook (7th Edition):
Duffin, Kirstin I. “The Functional Role of Leaf Nutrients in an Old-Field Successional Community.” 2015. Web. 26 Feb 2021.
Vancouver:
Duffin KI. The Functional Role of Leaf Nutrients in an Old-Field Successional Community. [Internet] [Masters thesis]. Eastern Illinois University; 2015. [cited 2021 Feb 26].
Available from: https://thekeep.eiu.edu/theses/2375.
Council of Science Editors:
Duffin KI. The Functional Role of Leaf Nutrients in an Old-Field Successional Community. [Masters Thesis]. Eastern Illinois University; 2015. Available from: https://thekeep.eiu.edu/theses/2375

Eastern Illinois University
21.
Favata, Carl Anthony.
Effects of Habitat Alteration on Ecomorphology of Fish Communities in a Restored Stream.
Degree: MS, 2016, Eastern Illinois University
URL: https://thekeep.eiu.edu/theses/2456
► Decades of anthropogenic pressure have devastated lotic ecosystems across the riverscapes of North America, resulting in degradation of critical habitat and contributing to sharp…
(more)
▼ Decades of anthropogenic pressure have devastated lotic ecosystems across the riverscapes of North America, resulting in degradation of critical habitat and contributing to sharp declines in biotic integrity. In response, local stream restoration projects have increased in frequency. However, little effort has been allocated to monitoring and project success has been limited. In addition, restoration projects typically focus on ecological effects above the population-level, while relationships with physiological processes are seldom assessed. Lessons from the long-term restoration and ecological monitoring of Kickapoo Creek highlight some of the complex dynamics driving reach-scale restoration projects. Following instream restoration, I predicted that alterations to critical habitat would stimulate community-level biotic response and increases in biotic integrity. Further, shifts in
ecology and distribution of fish following restoration would be linked to the energetic costs associated with navigating complex flows. To examine the relationships between community dissimilarity and habitat alteration, seven 200 m reaches were monitored annually during a seven-year study period. Using barge electrofishing surveys and a Qualitative Habitat Evaluation Index, I investigated distribution patterns of fishes along a gradient of habitat conditions. Following implementation of artificial riffles, rip-rap, scouring keys, and riparian vegetation I observed distinct temporal and spatial shifts in fish community structure. While biotic integrity remained in moderately low condition in reference assemblages, monitoring in restored reaches depicted a delayed temporal response to restoration. In restored sites biotic integrity was positively linked to additional instream habitat and altered channel morphology. Larger substrate sizes, submerged
terrestrial vegetation, and deep scour pools reduced siltation and provided necessary refuge to facilitate long-term recovery of degraded fish communities. To better understand the relationships between stream habitat, altered flows, and energetic costs, I measured metabolic oxygen consumption in Longear Sunfish,
Lepomis megalotis, swimming in turbulent flow. Fish swam in two flow regimes: quasi-laminar (control), and turbulence simulated by three vertical streets of vortices. Fish were adversely affected by turbulent vortices, and consumed on average 24.8% more oxygen in altered flows. Longear Sunfish also responded strongly to habitat alteration in Kickapoo Creek. Significant regression models linked abundance of Longear Sunfish with deep, slow-moving silt-bottom channels with abundant boulders and submerged vegetation. Ecomorphological models for Longear Sunfish suggest that increased metabolic demands associated with navigating complex turbulent flows may help explain habitat use and behavior. I highlight the need for more comprehensive assessment of restoration efforts. I also demonstrate the ability to use structural restoration as an effective management tool to mitigate loss…
Advisors/Committee Members: Anabela Maia.
Subjects/Keywords: Aquaculture and Fisheries; Terrestrial and Aquatic Ecology
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APA ·
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MLA ·
Vancouver ·
CSE |
Export
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Manager
APA (6th Edition):
Favata, C. A. (2016). Effects of Habitat Alteration on Ecomorphology of Fish Communities in a Restored Stream. (Masters Thesis). Eastern Illinois University. Retrieved from https://thekeep.eiu.edu/theses/2456
Chicago Manual of Style (16th Edition):
Favata, Carl Anthony. “Effects of Habitat Alteration on Ecomorphology of Fish Communities in a Restored Stream.” 2016. Masters Thesis, Eastern Illinois University. Accessed February 26, 2021.
https://thekeep.eiu.edu/theses/2456.
MLA Handbook (7th Edition):
Favata, Carl Anthony. “Effects of Habitat Alteration on Ecomorphology of Fish Communities in a Restored Stream.” 2016. Web. 26 Feb 2021.
Vancouver:
Favata CA. Effects of Habitat Alteration on Ecomorphology of Fish Communities in a Restored Stream. [Internet] [Masters thesis]. Eastern Illinois University; 2016. [cited 2021 Feb 26].
Available from: https://thekeep.eiu.edu/theses/2456.
Council of Science Editors:
Favata CA. Effects of Habitat Alteration on Ecomorphology of Fish Communities in a Restored Stream. [Masters Thesis]. Eastern Illinois University; 2016. Available from: https://thekeep.eiu.edu/theses/2456
22.
Nelson, Daniel T.
Development and Application of a Fish-Based Index of Biotic Integrity for Lakes in Eastern South Dakota.
Degree: MS, Natural Resource Management, 2017, South Dakota State University
URL: https://openprairie.sdstate.edu/etd/1675
► The Index of Biotic Integrity (IBI) was developed to summarize the impact of watershed and water quality degradation to biotic communities and help to…
(more)
▼ The Index of Biotic Integrity (IBI) was developed to summarize the impact of watershed and water quality degradation to biotic communities and help to provide a more complete picture of water quality changes that are not captured in traditional physical and chemical measurements. In 2014, nearly 15% of South Dakota lakes did not meet their designated beneficial uses based on water quality measures but the impacts to the fish communities are unknown. The goal of this study was to develop a fish-based IBI for eastern South Dakota lakes by addressing three specific objectives: 1) Determine whether an IBI could be developed for smaller lakes (surface area = 100 – 1,000 ha) using extant annual standardized fish community sampling data; 2) Evaluate whether the inclusion of small-bodied fishes improves the smaller lake IBI; and 3) Evaluate whether lentic IBIs should be developed for smaller and larger (>1,000 ha) lakes separately. Extant fish community data was collected from annual surveys conducted by the South Dakota Department of Game, Fish and Parks between 2011 and 2015 and were either used alone or in combination with shoreline seine samples from 17 lakes. For the first two objectives, potential metrics were screened to select metrics that best described fish community responses to watershed degradation. The third objective was addressed by applying the IBI based on the results of the first two objectives to larger lakes. The IBI developed for smaller lakes based on extant data alone resulted in four final metrics, (e.g., proportion of Centrarchidae, percent insectivores, percent intolerant species, and proportion of Ictaluridae) and was not improved with the inclusion of smaller-bodied fish collection data. Further, there was no difference between the performance of IBIs developed for smaller and larger lakes. These results show that lentic IBIs may be developed based on extant data with no additional sampling required. Thus, a history of IBI trends may be calculated for eastern South Dakota lakes to evaluate fish community changes in response to watershed land-use over time. Such long-term data may be used to identify and prioritize interventions that may improve water quality and fish communities.
Advisors/Committee Members: Melissa R. Wuellner.
Subjects/Keywords: Aquaculture and Fisheries; Terrestrial and Aquatic Ecology
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APA ·
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MLA ·
Vancouver ·
CSE |
Export
to Zotero / EndNote / Reference
Manager
APA (6th Edition):
Nelson, D. T. (2017). Development and Application of a Fish-Based Index of Biotic Integrity for Lakes in Eastern South Dakota. (Masters Thesis). South Dakota State University. Retrieved from https://openprairie.sdstate.edu/etd/1675
Chicago Manual of Style (16th Edition):
Nelson, Daniel T. “Development and Application of a Fish-Based Index of Biotic Integrity for Lakes in Eastern South Dakota.” 2017. Masters Thesis, South Dakota State University. Accessed February 26, 2021.
https://openprairie.sdstate.edu/etd/1675.
MLA Handbook (7th Edition):
Nelson, Daniel T. “Development and Application of a Fish-Based Index of Biotic Integrity for Lakes in Eastern South Dakota.” 2017. Web. 26 Feb 2021.
Vancouver:
Nelson DT. Development and Application of a Fish-Based Index of Biotic Integrity for Lakes in Eastern South Dakota. [Internet] [Masters thesis]. South Dakota State University; 2017. [cited 2021 Feb 26].
Available from: https://openprairie.sdstate.edu/etd/1675.
Council of Science Editors:
Nelson DT. Development and Application of a Fish-Based Index of Biotic Integrity for Lakes in Eastern South Dakota. [Masters Thesis]. South Dakota State University; 2017. Available from: https://openprairie.sdstate.edu/etd/1675
23.
Peterson, Erin D.
Invertebrate Prey Selectivity of Channel Catfish (Ictalurus punctatus) in Western South Dakota Prairie Streams.
Degree: MS, Natural Resource Management, 2017, South Dakota State University
URL: https://openprairie.sdstate.edu/etd/1677
► Benthic invertebrates are an important resource for aquatic consumers and should be considered in management of sportfish populations as a factor influencing fishery health.…
(more)
▼ Benthic invertebrates are an important resource for
aquatic consumers and should be considered in management of sportfish populations as a factor influencing fishery health. Our study seeks to draw a relationship between invertebrate prey availability and the Channel Catfish
Ictalurus punctatus fishery of western South Dakota through diet analysis, but invertebrate surveys in the area have not focused on invertebrates as a prey source. Our objectives were to characterize patterns in availability of the invertebrate prey base in five major river basins, and to evaluate the effects of availability on Channel Catfish prey selectivity and condition. Invertebrates were collected at 47 stream sites between the summers of 2015 and 2016, but Channel Catfish were collected only at the 23 mainstem sites. Seventy-four families and 181 genera of invertebrates were encountered. Insecta was the richest taxonomic group, with 162 genera. Diptera, which was composed of 11 families and 83 genera, was the most diverse order. The most numerically abundant genus collected was
Cheumatopsyche spp. (Trichoptera: Hydropsychidae), comprising 23.6% of all individuals. Clinging genera contributed 42.1% of the biovolume by habit guild, and biovolume of collector-filterers was the highest of all functional feeding groups (39.2%). Overall, prey biovolume was not uniform. The Grand and Cheyenne had a decreasing longitudinal trend in biovolume, while the Bad showed an increasing trend. There were no consistent patterns in biovolume for the Moreau or White, but sites in all basins with high biovolume typically also had a high abundance of clingers, which require stable surfaces for attachment. Across all sites, Hydropsychidae, Simuliidae, and Chironomidae had the highest biovolumes (35.8 mL, 8.3 mL, and 8.1 mL, respectively), and were also among the most important prey families in each basin (Prey-Specific Index of Relative Importance, %PSIRI). These families also tended to be preyed upon in greater proportion than their availability in the environment (Chesson’s selectivity index, α). Patterns in condition within and among basins mirrored patterns in prey biovolume in the Grand, Cheyenne, and Bad Rivers, indicating that availability may be driving condition. These results are important because two of the preferred prey families, Hydropsychidae and Simuliidae, are clingers, and the non-uniformity in biovolume of this habit guild among sites suggests that stable habitats are limiting abundance. The links drawn between Channel Catfish and their prey can be used by biologists to focus management activities on projects that will enhance the invertebrate prey base that Channel Catfish use, such as the restoration of riparian areas to increase instream structure, or the placement of artificial stable substrates.
Advisors/Committee Members: Nels H. Troelstrup, Jr..
Subjects/Keywords: Aquaculture and Fisheries; Terrestrial and Aquatic Ecology
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MLA ·
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to Zotero / EndNote / Reference
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APA (6th Edition):
Peterson, E. D. (2017). Invertebrate Prey Selectivity of Channel Catfish (Ictalurus punctatus) in Western South Dakota Prairie Streams. (Masters Thesis). South Dakota State University. Retrieved from https://openprairie.sdstate.edu/etd/1677
Chicago Manual of Style (16th Edition):
Peterson, Erin D. “Invertebrate Prey Selectivity of Channel Catfish (Ictalurus punctatus) in Western South Dakota Prairie Streams.” 2017. Masters Thesis, South Dakota State University. Accessed February 26, 2021.
https://openprairie.sdstate.edu/etd/1677.
MLA Handbook (7th Edition):
Peterson, Erin D. “Invertebrate Prey Selectivity of Channel Catfish (Ictalurus punctatus) in Western South Dakota Prairie Streams.” 2017. Web. 26 Feb 2021.
Vancouver:
Peterson ED. Invertebrate Prey Selectivity of Channel Catfish (Ictalurus punctatus) in Western South Dakota Prairie Streams. [Internet] [Masters thesis]. South Dakota State University; 2017. [cited 2021 Feb 26].
Available from: https://openprairie.sdstate.edu/etd/1677.
Council of Science Editors:
Peterson ED. Invertebrate Prey Selectivity of Channel Catfish (Ictalurus punctatus) in Western South Dakota Prairie Streams. [Masters Thesis]. South Dakota State University; 2017. Available from: https://openprairie.sdstate.edu/etd/1677

Florida International University
24.
Merselis, Daniel G.
Mechanisms for the Persistence of the Coral Holobiont in the Warming Oceans of the Anthropocene.
Degree: PhD, Biology, 2019, Florida International University
URL: https://digitalcommons.fiu.edu/etd/4287
;
FIDC008875
► Coral Reefs are rapidly deteriorating in response to an onslaught of human-mediated stressors. Just one stressor alone, climate change, may extirpate coral reef ecosystems…
(more)
▼ Coral Reefs are rapidly deteriorating in response to an onslaught of human-mediated stressors. Just one stressor alone, climate change, may extirpate coral reef ecosystems within a human lifetime, threatening societal and ecological catastrophe. Reef-derived ecosystem services are crucial for sustenance, coastal protection, and economic prosperity in over 100 countries. Near-term human decisions will determine whether reef-corals, the ecosystems they engineer, the 25% of marine biodiversity they support, and the human communities that depend upon them can be protected. My dissertation aims to characterize the potential for corals' adaptive mechanisms to facilitate their continued survival- information which will only represent hope if society takes decisive action on numerous environmental concerns. Even with swift action to curb carbon emissions, most of the world's reefs will come to experience annual hyperthermal stress beyond their current tolerances. Rapid warming necessitates improvement of physiological limits to prevent mass coral bleaching and disease. Bleaching metabolically deprives corals by terminating their ix obligate nutritional mutualism with symbiodiniacid dinoflagellates, while outbreaks of coral disease result in direct mortality. Using common garden experiments and coral species with disparate adaptive strategies, my dissertation appraises the feasibility of corals' adaptive mechanisms to facilitate survival under hyperthermal stress and environmental variability along a depth-cline. I characterized and monitored Symbiodiniaceae to detect adaptive changes in community identity, appraised the intrinsic capacity for corals to acclimatize, and estimated the potential for adaptation through coral evolution by comparing genotypes within the same species. Monitoring the dynamics of mass bleaching and disease outbreaks further enabled me to disentangle the frequently confounded effects of bleaching and thermal stress on an individual colony's risk of disease. Surprising results suggest that some bleaching may represent a mechanism of immune-activation by corals preparing to fight disease. I detected limited responsiveness of Symbiodiniaceae community rearrangement and no effect of innate acclimatization under the thermal stress, depth environments, and coral species investigated here. By contrast, variation between coral genotypes was a strong and highly significant predictor of all measurements made throughout this project. My dissertation provides recommendations for leveraging variability in host genotype performance and facilitating enormous evolutionary potential within a restoration framework.
Advisors/Committee Members: Mauricio Rodriguez-Lanetty, Jose M Eirin-Lopez, Jessica Siltberg-Liberles, Diego Lirman, Wesong Wu.
Subjects/Keywords: Integrative biology; terrestrial and aquatic ecology; Integrative Biology; Terrestrial and Aquatic Ecology
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❌
APA ·
Chicago ·
MLA ·
Vancouver ·
CSE |
Export
to Zotero / EndNote / Reference
Manager
APA (6th Edition):
Merselis, D. G. (2019). Mechanisms for the Persistence of the Coral Holobiont in the Warming Oceans of the Anthropocene. (Doctoral Dissertation). Florida International University. Retrieved from https://digitalcommons.fiu.edu/etd/4287 ; FIDC008875
Chicago Manual of Style (16th Edition):
Merselis, Daniel G. “Mechanisms for the Persistence of the Coral Holobiont in the Warming Oceans of the Anthropocene.” 2019. Doctoral Dissertation, Florida International University. Accessed February 26, 2021.
https://digitalcommons.fiu.edu/etd/4287 ; FIDC008875.
MLA Handbook (7th Edition):
Merselis, Daniel G. “Mechanisms for the Persistence of the Coral Holobiont in the Warming Oceans of the Anthropocene.” 2019. Web. 26 Feb 2021.
Vancouver:
Merselis DG. Mechanisms for the Persistence of the Coral Holobiont in the Warming Oceans of the Anthropocene. [Internet] [Doctoral dissertation]. Florida International University; 2019. [cited 2021 Feb 26].
Available from: https://digitalcommons.fiu.edu/etd/4287 ; FIDC008875.
Council of Science Editors:
Merselis DG. Mechanisms for the Persistence of the Coral Holobiont in the Warming Oceans of the Anthropocene. [Doctoral Dissertation]. Florida International University; 2019. Available from: https://digitalcommons.fiu.edu/etd/4287 ; FIDC008875
25.
Mansour, Gregory.
Survey of terrestrial macro-invertebrates hg content and assessment of low level hg presence on human health.
Degree: 2017, James Madison University
URL: https://commons.lib.jmu.edu/honors201019/319
► Forest ecosystems in the Shenandoah Valley of Virginia are not directly exposed to major sources of Hg contamination. Rockingham Co was assumed to be suitable…
(more)
▼ Forest ecosystems in the Shenandoah Valley of Virginia are not directly exposed to major sources of Hg contamination. Rockingham Co was assumed to be suitable as a low-level control in comparison with sites exposed to major industrial contamination in Waynesboro VA for studies in the late 1900’s. Subsequently the presence of low level Hg from background sources has been demonstrated. This study was conducted from 2014-2016 and expanded from two sites in to four sites in 2016. A composite air index, soil, and decaying organic material “duff” were analyzed for total THg concentrations using a Perkin Elmer Flow Injection Spectrophotometer dedicated to Hg analysis. The samples were digested in hot concentrated nitric and sulfuric acid. The results demonstrated a detectable amount of THg was present within the various samples with extensive variability. This prompted the question of whether there is an ambient level of mercury in
terrestrial ecosystems which are not associated with demonstrated contamination. An extensive literature search aggregated THg values from control sites used in a variety of studies. Comparing the findings with the Rockingham Co. sites indicated that the Hg presence is below the global average for control locations, yet remains detectable. None of the concentrations attained at these sites are great enough to be considered a health hazard. Annual sampling is needed to provide longitudinal data to account for seasonal variation and identify long term trends.
Advisors/Committee Members: W. Dean Cocking, Bruce Wiggins, Idelle Cooper.
Subjects/Keywords: ambient; mercury; terrestrial; background; trace; macroinvertebrate; Terrestrial and Aquatic Ecology
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APA ·
Chicago ·
MLA ·
Vancouver ·
CSE |
Export
to Zotero / EndNote / Reference
Manager
APA (6th Edition):
Mansour, G. (2017). Survey of terrestrial macro-invertebrates hg content and assessment of low level hg presence on human health. (Masters Thesis). James Madison University. Retrieved from https://commons.lib.jmu.edu/honors201019/319
Chicago Manual of Style (16th Edition):
Mansour, Gregory. “Survey of terrestrial macro-invertebrates hg content and assessment of low level hg presence on human health.” 2017. Masters Thesis, James Madison University. Accessed February 26, 2021.
https://commons.lib.jmu.edu/honors201019/319.
MLA Handbook (7th Edition):
Mansour, Gregory. “Survey of terrestrial macro-invertebrates hg content and assessment of low level hg presence on human health.” 2017. Web. 26 Feb 2021.
Vancouver:
Mansour G. Survey of terrestrial macro-invertebrates hg content and assessment of low level hg presence on human health. [Internet] [Masters thesis]. James Madison University; 2017. [cited 2021 Feb 26].
Available from: https://commons.lib.jmu.edu/honors201019/319.
Council of Science Editors:
Mansour G. Survey of terrestrial macro-invertebrates hg content and assessment of low level hg presence on human health. [Masters Thesis]. James Madison University; 2017. Available from: https://commons.lib.jmu.edu/honors201019/319
26.
Baxter, Jonathan Bradley.
Distribution, Movement, and Ecology of Etheostoma spilotum (Gilbert), the Kentucky Arrow Darter, in Gilberts Big Creek and Elisha Creek, Red Bird River Basin, Clay and Leslie Counties, Kentucky.
Degree: MS, Biological Sciences, 2015, Encompass Digital Archive, Eastern Kentucky University
URL: https://encompass.eku.edu/etd/337
► The Kentucky Arrow Darter (KAD), Etheostoma spilotum, is an endemic species to the Upper Kentucky River Basin and is currently proposed for listing as…
(more)
▼ The Kentucky Arrow Darter (KAD), Etheostoma spilotum, is an endemic species to the Upper Kentucky River Basin and is currently proposed for listing as threatened under the Endangered Species Act. The ecology and population status of this benthic species is poorly understood, so this study was designed to investigate the species’ movement capabilities, population dynamics, and overall ecology in two streams (Gilberts Big and Elisha Creek) in the Red Bird Ranger District, Daniel Boone National Forest, Kentucky. Project objectives included quantification of movement patterns, identification of microhabitat use, and estimation of population size in both streams. Sampling was conducted during three seasons (spring summer, and fall) in 2013 utilizing a probabilistic sampling design, with a total of 752 microhabitat plots being sampled from 23 reaches across those seasons. Utilizing passive integrated transponder (PIT) tags for continuous tracking, movements of 121 KADs ranged from 28-4,078m in both up and downstream directions. Population estimates ranged from 80-1498 individuals but varied depending on stream and season, with the spring season yielding the lowest estimate. Habitat associations between occupied and unoccupied reaches and plots were compared both seasonally and across all seasons. Results suggested that pool habitats with cobble, higher mean depths, and lower composition of sand, gravel, and boulders were more commonly associated with KAD presence.
Subjects/Keywords: Aquatic habitat; Darter; Etheostoma; Fish movement; Terrestrial and Aquatic Ecology
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❌
APA ·
Chicago ·
MLA ·
Vancouver ·
CSE |
Export
to Zotero / EndNote / Reference
Manager
APA (6th Edition):
Baxter, J. B. (2015). Distribution, Movement, and Ecology of Etheostoma spilotum (Gilbert), the Kentucky Arrow Darter, in Gilberts Big Creek and Elisha Creek, Red Bird River Basin, Clay and Leslie Counties, Kentucky. (Masters Thesis). Encompass Digital Archive, Eastern Kentucky University. Retrieved from https://encompass.eku.edu/etd/337
Chicago Manual of Style (16th Edition):
Baxter, Jonathan Bradley. “Distribution, Movement, and Ecology of Etheostoma spilotum (Gilbert), the Kentucky Arrow Darter, in Gilberts Big Creek and Elisha Creek, Red Bird River Basin, Clay and Leslie Counties, Kentucky.” 2015. Masters Thesis, Encompass Digital Archive, Eastern Kentucky University. Accessed February 26, 2021.
https://encompass.eku.edu/etd/337.
MLA Handbook (7th Edition):
Baxter, Jonathan Bradley. “Distribution, Movement, and Ecology of Etheostoma spilotum (Gilbert), the Kentucky Arrow Darter, in Gilberts Big Creek and Elisha Creek, Red Bird River Basin, Clay and Leslie Counties, Kentucky.” 2015. Web. 26 Feb 2021.
Vancouver:
Baxter JB. Distribution, Movement, and Ecology of Etheostoma spilotum (Gilbert), the Kentucky Arrow Darter, in Gilberts Big Creek and Elisha Creek, Red Bird River Basin, Clay and Leslie Counties, Kentucky. [Internet] [Masters thesis]. Encompass Digital Archive, Eastern Kentucky University; 2015. [cited 2021 Feb 26].
Available from: https://encompass.eku.edu/etd/337.
Council of Science Editors:
Baxter JB. Distribution, Movement, and Ecology of Etheostoma spilotum (Gilbert), the Kentucky Arrow Darter, in Gilberts Big Creek and Elisha Creek, Red Bird River Basin, Clay and Leslie Counties, Kentucky. [Masters Thesis]. Encompass Digital Archive, Eastern Kentucky University; 2015. Available from: https://encompass.eku.edu/etd/337

Loyola University Chicago
27.
Hertel, Samantha D.
Aquatic Insect Community Structure and Secondary
Production in Southcentral Alaska Streams with Contrasting Thermal
and Hydrologic Regimes.
Degree: MS, Biology, 2016, Loyola University Chicago
URL: https://ecommons.luc.edu/luc_theses/3345
► Streams along the Copper River Delta, southcentral Alaska, exhibit contrasting thermal and hydrologic variability associated with being primarily groundwater-fed (GWF) or surface water-fed (SWF).…
(more)
▼ Streams along the Copper River
Delta, southcentral Alaska, exhibit contrasting thermal and
hydrologic variability associated with being primarily
groundwater-fed (GWF) or surface water-fed (SWF). Groundwater-fed
streams are predictable both thermally and hydrologically year
round, whereas SWF streams are unpredictable and exhibit more
variable thermal and hydrologic regimes. These differences may
strongly influence aquatic insect community structure and secondary
production. Four streams, two GWF and two SWF, were sampled twice
monthly from late April 2013 through August 2013 and once
seasonally in fall (September) and early winter (November). Aquatic
insect community structure differed markedly in both hydrologic
types. Taxa richness was significantly higher in SWF (43) than in
GWF (39) streams and non-metric multidimensional scaling of
community structure revealed two distinct groups corresponding to
the two hydrologic types. Total secondary production was higher in
GWF than in SWF streams with Orthocladiinae (Diptera: Chironomidae)
representing 56% of insect secondary production in GWF streams.
Results from this study have strong implications for aquatic insect
communities in GWF and SWF streams because of differing
susceptibilities of these systems to the potential effects of
climate change. Due to their thermal stability, groundwater-fed
streams are less likely to be impacted by climate change, whereas
SWF streams are thermally variable and more likely to be
influenced. The effects of altered aquatic insect communities can
cascade to higher trophic levels such as salmon and ultimately
impact stream ecosystem function and the ecosystem services they
provide.
Subjects/Keywords: Aquatic insects; Groundwater-fed; Hydrology; Orthocladiinae; Temperature; Terrestrial and Aquatic Ecology
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❌
APA ·
Chicago ·
MLA ·
Vancouver ·
CSE |
Export
to Zotero / EndNote / Reference
Manager
APA (6th Edition):
Hertel, S. D. (2016). Aquatic Insect Community Structure and Secondary
Production in Southcentral Alaska Streams with Contrasting Thermal
and Hydrologic Regimes. (Thesis). Loyola University Chicago. Retrieved from https://ecommons.luc.edu/luc_theses/3345
Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation
Chicago Manual of Style (16th Edition):
Hertel, Samantha D. “Aquatic Insect Community Structure and Secondary
Production in Southcentral Alaska Streams with Contrasting Thermal
and Hydrologic Regimes.” 2016. Thesis, Loyola University Chicago. Accessed February 26, 2021.
https://ecommons.luc.edu/luc_theses/3345.
Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation
MLA Handbook (7th Edition):
Hertel, Samantha D. “Aquatic Insect Community Structure and Secondary
Production in Southcentral Alaska Streams with Contrasting Thermal
and Hydrologic Regimes.” 2016. Web. 26 Feb 2021.
Vancouver:
Hertel SD. Aquatic Insect Community Structure and Secondary
Production in Southcentral Alaska Streams with Contrasting Thermal
and Hydrologic Regimes. [Internet] [Thesis]. Loyola University Chicago; 2016. [cited 2021 Feb 26].
Available from: https://ecommons.luc.edu/luc_theses/3345.
Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation
Council of Science Editors:
Hertel SD. Aquatic Insect Community Structure and Secondary
Production in Southcentral Alaska Streams with Contrasting Thermal
and Hydrologic Regimes. [Thesis]. Loyola University Chicago; 2016. Available from: https://ecommons.luc.edu/luc_theses/3345
Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation

University of California – Berkeley
28.
Uno, Hiromi.
Spatial and temporal linkage of stream-riparian food webs by seasonal migration of mayfly Ephemerella maculata.
Degree: Integrative Biology, 2016, University of California – Berkeley
URL: http://www.escholarship.org/uc/item/9645x8q3
► Stream environments are spatially and temporally heterogeneous. Mainstem rivers are often wide, sunlit, warm and productive, while tributaries are shaded by riparian trees, unproductive, and…
(more)
▼ Stream environments are spatially and temporally heterogeneous. Mainstem rivers are often wide, sunlit, warm and productive, while tributaries are shaded by riparian trees, unproductive, and remain cool in summer. Within mainstem rivers themselves there is substantial spatial heterogeneity in habitat structure and physical conditions, such as water temperature. River environments also change dramatically with season. Organisms that live in the riverine environment respond to and take advantage of such heterogeneous environments by moving between microhabitats or shifting their phenology. I studied the life cycle of a riverine mayfly, Ephemerella maculata (Ephemerellidae), in a northern California river system, its responses to spatial and temporal heterogeneity, and how its movements connect stream and riparian food webs in space and time. I discovered that E. maculata migrates between the mainstem and tributaries of rivers during its life cycle, thereby linking food webs in these two habitats, and enhancing predator growth in unproductive tributaries. The resource subsidy from productive but warm rivers to cool, unproductive tributaries associated with the mayfly migration increase the growth of stenothermic predators like juvenile salmonids in otherwise food-limited, cool thermal refuges, and increase their resilience to future warming. Furthermore, I examined the resilience of E. maculata to changes in water temperature using field surveys and lab rearing experiments. I discovered that different life stages of E. maculata have different thermal responses, and they shift their phenology depending on the water temperature, allowing each life stage to occur in the most desirable thermal condition. Therefore, as long as the natural seasonal pattern of the water temperature is sustained, E. maculata can resist temperature changes by shifting their phenology. Finally, I have shown that thermal spatial heterogeneity of rivers desynchronizes mayfly emergence timing, prolonging the subsidy period to riparian predators, and changing the predators’ responses to this subsidy.
Subjects/Keywords: Ecology; Aquatic sciences; aquatic insect; aquatic-terrestrial linkage; food web; spatial heterogeneity; subsidy; temporal heterogeneity
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❌
APA ·
Chicago ·
MLA ·
Vancouver ·
CSE |
Export
to Zotero / EndNote / Reference
Manager
APA (6th Edition):
Uno, H. (2016). Spatial and temporal linkage of stream-riparian food webs by seasonal migration of mayfly Ephemerella maculata. (Thesis). University of California – Berkeley. Retrieved from http://www.escholarship.org/uc/item/9645x8q3
Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation
Chicago Manual of Style (16th Edition):
Uno, Hiromi. “Spatial and temporal linkage of stream-riparian food webs by seasonal migration of mayfly Ephemerella maculata.” 2016. Thesis, University of California – Berkeley. Accessed February 26, 2021.
http://www.escholarship.org/uc/item/9645x8q3.
Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation
MLA Handbook (7th Edition):
Uno, Hiromi. “Spatial and temporal linkage of stream-riparian food webs by seasonal migration of mayfly Ephemerella maculata.” 2016. Web. 26 Feb 2021.
Vancouver:
Uno H. Spatial and temporal linkage of stream-riparian food webs by seasonal migration of mayfly Ephemerella maculata. [Internet] [Thesis]. University of California – Berkeley; 2016. [cited 2021 Feb 26].
Available from: http://www.escholarship.org/uc/item/9645x8q3.
Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation
Council of Science Editors:
Uno H. Spatial and temporal linkage of stream-riparian food webs by seasonal migration of mayfly Ephemerella maculata. [Thesis]. University of California – Berkeley; 2016. Available from: http://www.escholarship.org/uc/item/9645x8q3
Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation

Purdue University
29.
Honsey, Andrew E.
The decline of cisco Coregonus artedi at its southern range extent: Stock biology and management implications.
Degree: MS, Forestry and Natural Resources, 2014, Purdue University
URL: http://docs.lib.purdue.edu/open_access_theses/337
► The cisco Coregonus artedi is distributed throughout northern North America and is relegated to coldwater, oligotrophic systems. Populations of cisco located at the species'…
(more)
▼ The cisco
Coregonus artedi is distributed throughout northern North America and is relegated to coldwater, oligotrophic systems. Populations of cisco located at the species' southern range extent, including northern Indiana and southern Michigan, have drastically declined over the past century, seemingly due to a combination of climate warming and exacerbation of hypolimnetic hypoxic conditions via intensive land-use and resulting increases in nutrient loading. Apart from their decline, information on southern ciscoes is lacking, including basic stock demography and genetic variability. Such information may shed light on the likely sustainability (or lack thereof) of remaining populations. The first portion of this study aimed to (1) establish a baseline understanding of the stock biology of southern cisco populations, (2) assess the potential risk of extirpation among populations via assessments of stock biology and an analysis of intra-population genetic variation, and (3) explore the population history of southern ciscoes and assess their viability for conservation usage by examining inter-population genetic variation. Results indicate that southern cisco populations exhibit relatively consistent recruitment success and generally balanced sex ratios, indicating relatively healthy populations. However, the narrow size distributions exhibited in most lakes and the skewed sex ratios seen in some lakes may indicate sampling biases or the potential vulnerability of larger ciscoes and females to mortality events. An analysis of mitochondrial DNA sequences suggested that variation both within and among cisco populations is low; furthermore, this low variation may be exacerbated by selective mortality events. In contrast, microsatellite genetic analyses showed higher intra-population variation and suggest that all southern populations are genetically distinct. Taken in concert, these results indicate that the Crooked/Little Crooked and Indiana lakes populations are among the most sustainable, while the population in Eve Lake may be among the most likely to become extirpated.
While biotic factors influence population sustainability, the viability of southern ciscoes may depend heavily on abiotic factors due to their strict environmental (e.g., oxythermal) tolerances. The second portion of this study focused on analyzing lake morphometric and land-use characteristics in Indiana lakes which support cisco, versus lakes where cisco have been extirpated or never existed. In general, larger, deeper lakes were found to be more likely to have contained cisco (either currently or in the past). However, smaller lakes with larger ratios of lake area to total catchment area (i.e., headwater lakes) were more likely to contain current cisco populations than larger lakes. These results highlight the importance of minimizing nutrient loading, particularly from land-use practices, in preserving cisco populations.
Advisors/Committee Members: Tomas O. Hook, Steven B. Donabauer, Andrew J. DeWoody.
Subjects/Keywords: Biological sciences; Ecology and Evolutionary Biology; Terrestrial and Aquatic Ecology
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❌
APA ·
Chicago ·
MLA ·
Vancouver ·
CSE |
Export
to Zotero / EndNote / Reference
Manager
APA (6th Edition):
Honsey, A. E. (2014). The decline of cisco Coregonus artedi at its southern range extent: Stock biology and management implications. (Thesis). Purdue University. Retrieved from http://docs.lib.purdue.edu/open_access_theses/337
Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation
Chicago Manual of Style (16th Edition):
Honsey, Andrew E. “The decline of cisco Coregonus artedi at its southern range extent: Stock biology and management implications.” 2014. Thesis, Purdue University. Accessed February 26, 2021.
http://docs.lib.purdue.edu/open_access_theses/337.
Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation
MLA Handbook (7th Edition):
Honsey, Andrew E. “The decline of cisco Coregonus artedi at its southern range extent: Stock biology and management implications.” 2014. Web. 26 Feb 2021.
Vancouver:
Honsey AE. The decline of cisco Coregonus artedi at its southern range extent: Stock biology and management implications. [Internet] [Thesis]. Purdue University; 2014. [cited 2021 Feb 26].
Available from: http://docs.lib.purdue.edu/open_access_theses/337.
Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation
Council of Science Editors:
Honsey AE. The decline of cisco Coregonus artedi at its southern range extent: Stock biology and management implications. [Thesis]. Purdue University; 2014. Available from: http://docs.lib.purdue.edu/open_access_theses/337
Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation

College of William and Mary
30.
Dean, Britt Leighanne.
Modulation of Watershed Nutrient Loads By Tidal Creek Ecosystems on The Virginia Eastern Shore.
Degree: MS, Virginia Institute of Marine Science, 2016, College of William and Mary
URL: https://scholarworks.wm.edu/etd/1477068164
► While deeper estuaries typically demonstrate predictable responses to increased nutrient loads, responses in shallow systems are more varied, due in part to the presence…
(more)
▼ While deeper estuaries typically demonstrate predictable responses to increased nutrient loads, responses in shallow systems are more varied, due in part to the presence of multiple benthic autotrophs. Shallow systems are particularly vulnerable to increases in watershed nutrient loads due to their position at the interface between land and open water. The prevailing conceptual model of eutrophication for shallow systems currently describes a succession in the dominant autotroph from seagrass to macroalgae to phytoplankton, but this model does not include benthic microalgae, which can sequester nutrients in photic systems. The Virginia Eastern Shore is characterized by shallow lagoons connected to upland watersheds through small tidal creeks, where the main source of fresh water and nutrients is groundwater. While some studies have characterized the response of the lagoons to nutrient loads, little is known about the tidal creeks and whether they act as filters, transformers, or conduits for land-based nutrients. We examined the role tidal creeks play in modulating watershed nutrient inputs in the Great Machipongo River (GMR) system, the largest tidal creek complex on the seaside of the Virginia Eastern Shore. We developed a field monitoring program that provided data to calibrate a reduced complexity Estuarine Ecosystem Model (EEM). Production, respiration, and net ecosystem metabolism were quantified, using both the open water and component methods, seasonally at three sites within this system. These rates together with monthly concentrations of standing stock nutrients and water column chlorophyll, monthly DataFlow surveys of physiochemical parameters, seasonally and spatially-intensive benthic chlorophyll surveys, and a bathymetric survey were used to develop and calibrate the EEM. The model was used to assess the degree to which tidal creeks export (via flushing), remove (via denitrification), or transform (via autotrophic uptake) land-based nutrient loads to the adjacent lagoons during baseflow and storm conditions. Component metabolism studies showed the system was overall net autotrophic, with increasing dominance of benthic processes towards the head of the estuary. Open water metabolism studies suggested the system was overall net heterotrophic, but we believe this conclusion is biased by the surrounding marshes and violations of the constant water mass assumption. The creek system exported 61,476 kg N y-1 as phytoplankton biomass, an amount approximately equal to inputs from the watershed and atmosphere, and imported 172,830 kg N y-1 in dissolved inorganic forms for a net import of 111,354 kg N y-1 from Hog Island Bay. Phytoplankton uptake, benthic microalgal uptake, and denitrification accounted for 216%, 343%, and 38% of the annual input of watershed and atmospheric N to the system, indicative of rapid cycling and advection of nutrients from Hog Island Bay. The storm simulation showed that almost all of the additional 28,635 kg N y-1 added from the watershed was flushed to Hog Island Bay and a small…
Subjects/Keywords: Ecology and Evolutionary Biology; Marine Biology; Terrestrial and Aquatic Ecology
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APA (6th Edition):
Dean, B. L. (2016). Modulation of Watershed Nutrient Loads By Tidal Creek Ecosystems on The Virginia Eastern Shore. (Masters Thesis). College of William and Mary. Retrieved from https://scholarworks.wm.edu/etd/1477068164
Chicago Manual of Style (16th Edition):
Dean, Britt Leighanne. “Modulation of Watershed Nutrient Loads By Tidal Creek Ecosystems on The Virginia Eastern Shore.” 2016. Masters Thesis, College of William and Mary. Accessed February 26, 2021.
https://scholarworks.wm.edu/etd/1477068164.
MLA Handbook (7th Edition):
Dean, Britt Leighanne. “Modulation of Watershed Nutrient Loads By Tidal Creek Ecosystems on The Virginia Eastern Shore.” 2016. Web. 26 Feb 2021.
Vancouver:
Dean BL. Modulation of Watershed Nutrient Loads By Tidal Creek Ecosystems on The Virginia Eastern Shore. [Internet] [Masters thesis]. College of William and Mary; 2016. [cited 2021 Feb 26].
Available from: https://scholarworks.wm.edu/etd/1477068164.
Council of Science Editors:
Dean BL. Modulation of Watershed Nutrient Loads By Tidal Creek Ecosystems on The Virginia Eastern Shore. [Masters Thesis]. College of William and Mary; 2016. Available from: https://scholarworks.wm.edu/etd/1477068164
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