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You searched for subject:(Li Wu Luo). Showing records 1 – 2 of 2 total matches.

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Brno University of Technology

1. Svoboda, Matěj. Pozitivní a negativní selekce mitochondriálního genomu: Pozitive and negative selection of mitochondrial genome.

Degree: 2019, Brno University of Technology

This bachelor thesis deals with positive and negative selection detection in mitochondrial genome of invertebrates and vertebrates. The component of this paper is to interpret the theory of evolution and evolution models. The main objective of this bachelor thesis is to formulate the algorithm package for a positive and negative selection detection in a program environment, RStudio. Consequently, outcomes of algorithm are compared to values acquired by tool PAML. Advisors/Committee Members: Maděránková, Denisa (advisor), Škutková, Helena (referee).

Subjects/Keywords: Metoda Li-Wu-Luo; metoda Nei-Gojobori; mitochondriální genom; negativní selekce; PAML; pozitivní selekce; RStudio.; Li-Wu-Luo method; mitochondrial genom; negative selection; Nei-Gojobori method; PAML; positive selection; RStudio.

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APA · Chicago · MLA · Vancouver · CSE | Export to Zotero / EndNote / Reference Manager

APA (6th Edition):

Svoboda, M. (2019). Pozitivní a negativní selekce mitochondriálního genomu: Pozitive and negative selection of mitochondrial genome. (Thesis). Brno University of Technology. Retrieved from http://hdl.handle.net/11012/82501

Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation

Chicago Manual of Style (16th Edition):

Svoboda, Matěj. “Pozitivní a negativní selekce mitochondriálního genomu: Pozitive and negative selection of mitochondrial genome.” 2019. Thesis, Brno University of Technology. Accessed May 06, 2021. http://hdl.handle.net/11012/82501.

Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation

MLA Handbook (7th Edition):

Svoboda, Matěj. “Pozitivní a negativní selekce mitochondriálního genomu: Pozitive and negative selection of mitochondrial genome.” 2019. Web. 06 May 2021.

Vancouver:

Svoboda M. Pozitivní a negativní selekce mitochondriálního genomu: Pozitive and negative selection of mitochondrial genome. [Internet] [Thesis]. Brno University of Technology; 2019. [cited 2021 May 06]. Available from: http://hdl.handle.net/11012/82501.

Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation

Council of Science Editors:

Svoboda M. Pozitivní a negativní selekce mitochondriálního genomu: Pozitive and negative selection of mitochondrial genome. [Thesis]. Brno University of Technology; 2019. Available from: http://hdl.handle.net/11012/82501

Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation


Brno University of Technology

2. Procházka, Ondřej. Metody detekce selekce v DNA sekvencích: Methods to detect selection in DNA sequences.

Degree: 2019, Brno University of Technology

The topic of semestral thesis is methods to detect selection in DNA sequences. In the begining of the thesis we will describe molecular evolution. It will be written what made the evolution and how the evolution is shown. Moreover there are gen mutations and mechanisms of diffuse and fixation. It will be defined what pozitive, negative and neutral selection is. The thesis is focused on evolution distance of synonymous and nonsynonymous substitution. There will be described three methods – Nei-Gojobori, Li-Wu-Luo and Comeron. All these methods will be described with mathematic formulas. There will be statistic test to decide what kind of selection ti is – there will be used z-test. In the practical part, there will be information about developed software what counts selection pressure from sequences from databazes in format GenBank and it shows parts where selection is. The software will be used for two data sets with two different genetic codes. The result will be discussed. We will discuss results of all three methods of selection pressure and influence of input parametrs. Advisors/Committee Members: Škutková, Helena (advisor), Maděránková, Denisa (referee).

Subjects/Keywords: Mutace; přírodní výběr; selekce; selekční tlak; Ka/Ks poměr; Nei-Gojobori; Li-Wu-Luo; Comeron; synonymní substituce; nesynonymní substituce; Mutation; selection; natural selection; selective pressure; Ka/Ks ratio; Nei-Gojobori; Li-Wu-Luo; Comeron; synonymous substitution; nonsynonymous substitution

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APA · Chicago · MLA · Vancouver · CSE | Export to Zotero / EndNote / Reference Manager

APA (6th Edition):

Procházka, O. (2019). Metody detekce selekce v DNA sekvencích: Methods to detect selection in DNA sequences. (Thesis). Brno University of Technology. Retrieved from http://hdl.handle.net/11012/59862

Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation

Chicago Manual of Style (16th Edition):

Procházka, Ondřej. “Metody detekce selekce v DNA sekvencích: Methods to detect selection in DNA sequences.” 2019. Thesis, Brno University of Technology. Accessed May 06, 2021. http://hdl.handle.net/11012/59862.

Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation

MLA Handbook (7th Edition):

Procházka, Ondřej. “Metody detekce selekce v DNA sekvencích: Methods to detect selection in DNA sequences.” 2019. Web. 06 May 2021.

Vancouver:

Procházka O. Metody detekce selekce v DNA sekvencích: Methods to detect selection in DNA sequences. [Internet] [Thesis]. Brno University of Technology; 2019. [cited 2021 May 06]. Available from: http://hdl.handle.net/11012/59862.

Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation

Council of Science Editors:

Procházka O. Metody detekce selekce v DNA sekvencích: Methods to detect selection in DNA sequences. [Thesis]. Brno University of Technology; 2019. Available from: http://hdl.handle.net/11012/59862

Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation

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