subject:(GPGPU)

1. Lykov, Kirill. Cell mechanics in flow: algorithms and applications.

Degree: 2017, Università della Svizzera italiana

► The computer simulations are pervasively used to improve the knowledge about biophysical phenomena and to quantify effects which are difficult to study experimentally. Generally, the… (more)

▼ The computer simulations are pervasively used to improve the knowledge about biophysical phenomena and to quantify effects which are difficult to study experimentally. Generally, the numerical methods and models are desired to be as accurate as possible on the chosen length and time scales, but, at the same time, affordable in terms of computations. Until recently, the cell mechanics and blood flow phenomena on the sub-micron resolution could not be rigorously studied using computer simulations. However, within the last decade, advances in methods and hardware catalyzed the development of models for cells mechanics and blood flow modeling which, previously, were considered to be not feasible. In this context, a model should accurately describe a phenomenon, be computationally affordable, and be flexible to be applied to study different biophysical changes. This thesis focuses on the development of the new methods, models, and high-performance software implementation that expand the class of problems which can be studied numerically using particle-based methods. Microvascular networks have complex geometry, often without any symmetry, and to study them we need to tackle computational domains with several inlets and outlets. However, an absence of appropriate boundary conditions for particle- based methods hampers study of the blood flow in these domains. Another obstacle to model complex blood flow problems is the absence the highperformance software. This problem restricts the applicability of the of particlebased cell flow models to relatively small systems. Although there are several validated red blood cell models, to date, there are no models for suspended eukaryotic cells. The present thesis addresses these issues. We introduce new open boundary conditions for particle-based systems and apply them to study blood flow in a part of a microvascular network. We develop a software demonstrating outstanding performance on the largest supercomputers and used it to study blood flow in microfluidic devices. Finally, we present a new eukaryotic cell model which helps in quantifying the effect of sub-cellular components on the cell mechanics during deformations in microfluidic devices. Advisors/Committee Members: Igor V. (Dir.).

Subjects/Keywords: GPGPU

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APA (6^th Edition):

Lykov, K. (2017). Cell mechanics in flow: algorithms and applications. (Thesis). Università della Svizzera italiana. Retrieved from http://doc.rero.ch/record/305203

Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation

Chicago Manual of Style (16^th Edition):

Lykov, Kirill. “Cell mechanics in flow: algorithms and applications.” 2017. Thesis, Università della Svizzera italiana. Accessed September 21, 2018. http://doc.rero.ch/record/305203.

Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation

MLA Handbook (7^th Edition):

Lykov, Kirill. “Cell mechanics in flow: algorithms and applications.” 2017. Web. 21 Sep 2018.

Vancouver:

Lykov K. Cell mechanics in flow: algorithms and applications. [Internet] [Thesis]. Università della Svizzera italiana; 2017. [cited 2018 Sep 21]. Available from: http://doc.rero.ch/record/305203.

Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation

Council of Science Editors:

Lykov K. Cell mechanics in flow: algorithms and applications. [Thesis]. Università della Svizzera italiana; 2017. Available from: http://doc.rero.ch/record/305203

Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation

2. Tripathy, Aalap. High Performance Information Filtering on Many-core Processors.

Degree: 2013, Texas Digital Library

URL: http://hdl.handle.net/1969; http://hdl.handle.net/2249.1/66755

► The increasing amount of information accessible to a user digitally makes search difficult, time consuming and unsatisfactory. This has led to the development of active… (more)

Subjects/Keywords: GPGPU

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APA (6^th Edition):

Tripathy, A. (2013). High Performance Information Filtering on Many-core Processors. (Thesis). Texas Digital Library. Retrieved from http://hdl.handle.net/1969; http://hdl.handle.net/2249.1/66755

Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation

Chicago Manual of Style (16^th Edition):

Tripathy, Aalap. “High Performance Information Filtering on Many-core Processors.” 2013. Thesis, Texas Digital Library. Accessed September 21, 2018. http://hdl.handle.net/1969; http://hdl.handle.net/2249.1/66755.

Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation

MLA Handbook (7^th Edition):

Tripathy, Aalap. “High Performance Information Filtering on Many-core Processors.” 2013. Web. 21 Sep 2018.

Vancouver:

Tripathy A. High Performance Information Filtering on Many-core Processors. [Internet] [Thesis]. Texas Digital Library; 2013. [cited 2018 Sep 21]. Available from: http://hdl.handle.net/1969; http://hdl.handle.net/2249.1/66755.

Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation

Council of Science Editors:

Tripathy A. High Performance Information Filtering on Many-core Processors. [Thesis]. Texas Digital Library; 2013. Available from: http://hdl.handle.net/1969; http://hdl.handle.net/2249.1/66755

Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation

University of Alberta

3. Garg, Rahul. A compiler for parallel execution of numerical Python programs on graphics processing units.

Degree: MS, Department of Computing Science, 2009, University of Alberta

URL: https://era.library.ualberta.ca/files/4j03d0630

► Modern Graphics Processing Units (GPUs) are providing breakthrough performance for numerical computing at the cost of increased programming complexity. Current programming models for GPUs require… (more)

Subjects/Keywords: gpgpu; compiler

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APA (6^th Edition):

Garg, R. (2009). A compiler for parallel execution of numerical Python programs on graphics processing units. (Masters Thesis). University of Alberta. Retrieved from https://era.library.ualberta.ca/files/4j03d0630

Chicago Manual of Style (16^th Edition):

Garg, Rahul. “A compiler for parallel execution of numerical Python programs on graphics processing units.” 2009. Masters Thesis, University of Alberta. Accessed September 21, 2018. https://era.library.ualberta.ca/files/4j03d0630.

MLA Handbook (7^th Edition):

Garg, Rahul. “A compiler for parallel execution of numerical Python programs on graphics processing units.” 2009. Web. 21 Sep 2018.

Vancouver:

Garg R. A compiler for parallel execution of numerical Python programs on graphics processing units. [Internet] [Masters thesis]. University of Alberta; 2009. [cited 2018 Sep 21]. Available from: https://era.library.ualberta.ca/files/4j03d0630.

Council of Science Editors:

Garg R. A compiler for parallel execution of numerical Python programs on graphics processing units. [Masters Thesis]. University of Alberta; 2009. Available from: https://era.library.ualberta.ca/files/4j03d0630

University of Otago

4. Peng, Wu. Clgrep: A Parallel String Matching Tool .

Degree: 2013, University of Otago

URL: http://hdl.handle.net/10523/4001

► In this study, we widely investigate the problem of string matching in the context of Heterogeneous Parallel Computing. A overview of string match- ing is… (more)

Subjects/Keywords: gpgpu; stringmatching

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APA (6^th Edition):

Peng, W. (2013). Clgrep: A Parallel String Matching Tool . (Masters Thesis). University of Otago. Retrieved from http://hdl.handle.net/10523/4001

Chicago Manual of Style (16^th Edition):

Peng, Wu. “Clgrep: A Parallel String Matching Tool .” 2013. Masters Thesis, University of Otago. Accessed September 21, 2018. http://hdl.handle.net/10523/4001.

MLA Handbook (7^th Edition):

Peng, Wu. “Clgrep: A Parallel String Matching Tool .” 2013. Web. 21 Sep 2018.

Vancouver:

Peng W. Clgrep: A Parallel String Matching Tool . [Internet] [Masters thesis]. University of Otago; 2013. [cited 2018 Sep 21]. Available from: http://hdl.handle.net/10523/4001.

Council of Science Editors:

Peng W. Clgrep: A Parallel String Matching Tool . [Masters Thesis]. University of Otago; 2013. Available from: http://hdl.handle.net/10523/4001

University of Waterloo

5. Constable, Stephen Joel. Path Integral Approaches and Graphics Processing Unit Tools for Quantum Molecular Dynamics Simulations.

Degree: 2012, University of Waterloo

URL: http://hdl.handle.net/10012/6866

► This thesis details both the technical and theoretical aspects of performing path integrals through classical Molecular Dynamics (MD) simulations. In particular, Graphics Processing Unit (GPU)… (more)

▼ This thesis details both the technical and theoretical aspects of performing path integrals through classical Molecular Dynamics (MD) simulations. In particular, Graphics Processing Unit (GPU) computing is used to augment the Path Integral Molecular Dynamics (PIMD) portion of the widely available Molecular Modelling Tool Kit (MMTK) library. This same PIMD code is also extended in a different direction: a novel method for nuclear ground state property prediction is introduced that closely mimics existing code in functional form. In order to add GPU computing capabilities to the existing MMTK codebase, the open source Open Molecular Mechanics (OpenMM) library was used. OpenMM provides high performance implementations of a variety of commonly used MD algorithms, with the goal of supporting current and future specialized hardware. Due to the object oriented nature of both codes, and the use of SI units in each, the development process was rather painless. The integration of OpenMM with MMTK is seamless, and arbitrary systems are supported without the user even needing to know that GPU acceleration is being used. The hybrid OpenMM-MMTK code is benchmarked against the vanilla MMTK code in terms of speed and accuracy, and the results show that GPU computing is the obvious choice for PIMD simulations. Starting with a desire to apply the highly efficient Path Integral Langevin Equation (PILE) thermostat to the Path Integral Ground State (PIGS) problem, a new hybrid PILE-PIGS, or LE-PIGS, method was developed. This thesis describes the theoretical justification for this method, including the introduction of a modified normal mode representation based on the Discrete Cosine Transform (DCT). It is shown that in DCT space, the equations of motion of a PIGS system are virtually identical to the equations of motion of a PIMD system in Fourier space. This leads to direct reuse of existing PILE code in MMTK, and options to extend this ground state problem to OpenMM for the purpose of GPU acceleration. The method is applied to a series of model systems, and in each case convergence to the exact ground state energy is observed.

Subjects/Keywords: PIMD; GPGPU

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APA (6^th Edition):

Constable, S. J. (2012). Path Integral Approaches and Graphics Processing Unit Tools for Quantum Molecular Dynamics Simulations. (Thesis). University of Waterloo. Retrieved from http://hdl.handle.net/10012/6866

Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation

Chicago Manual of Style (16^th Edition):

Constable, Stephen Joel. “Path Integral Approaches and Graphics Processing Unit Tools for Quantum Molecular Dynamics Simulations.” 2012. Thesis, University of Waterloo. Accessed September 21, 2018. http://hdl.handle.net/10012/6866.

Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation

MLA Handbook (7^th Edition):

Constable, Stephen Joel. “Path Integral Approaches and Graphics Processing Unit Tools for Quantum Molecular Dynamics Simulations.” 2012. Web. 21 Sep 2018.

Vancouver:

Constable SJ. Path Integral Approaches and Graphics Processing Unit Tools for Quantum Molecular Dynamics Simulations. [Internet] [Thesis]. University of Waterloo; 2012. [cited 2018 Sep 21]. Available from: http://hdl.handle.net/10012/6866.

Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation

Council of Science Editors:

Constable SJ. Path Integral Approaches and Graphics Processing Unit Tools for Quantum Molecular Dynamics Simulations. [Thesis]. University of Waterloo; 2012. Available from: http://hdl.handle.net/10012/6866

Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation

6. Cwikla, Martin. The Low-Frequency Multi-Level Fast Multipole Method on Graphics Processors.

Degree: Electrical and Computer Engineering, 2009, University of Manitoba

URL: http://hdl.handle.net/1993/3209

► The Fast Multipole Method (FMM) allows for rapid evaluation of the fundamental solution of the Helmholtz equation, known as Green's function. Evaluation times are reduced… (more)

Subjects/Keywords: GPGPU

…72 6.6 Benchmark 1: GPGPU Time in Minutes. . . . . . . . . . . . . . . . 72 6.7… …GPGPU Time and Memory Use Scaling for the FMM Versus a Direct Approach… …19 3.2 A GPGPU Featuring a GT200 Chip. . . . . . . . . . . . . . . . . . 19 3.3 Some… …Features of an nVidia GPGPU Multiprocessor with Compute Capability 1.3… …Method and a GPGPU Kernel Performing the Same Operations. 23 3.2 A Sample CPU Method and…

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APA (6^th Edition):

Cwikla, M. (2009). The Low-Frequency Multi-Level Fast Multipole Method on Graphics Processors. (Masters Thesis). University of Manitoba. Retrieved from http://hdl.handle.net/1993/3209

Chicago Manual of Style (16^th Edition):

Cwikla, Martin. “The Low-Frequency Multi-Level Fast Multipole Method on Graphics Processors.” 2009. Masters Thesis, University of Manitoba. Accessed September 21, 2018. http://hdl.handle.net/1993/3209.

MLA Handbook (7^th Edition):

Cwikla, Martin. “The Low-Frequency Multi-Level Fast Multipole Method on Graphics Processors.” 2009. Web. 21 Sep 2018.

Vancouver:

Cwikla M. The Low-Frequency Multi-Level Fast Multipole Method on Graphics Processors. [Internet] [Masters thesis]. University of Manitoba; 2009. [cited 2018 Sep 21]. Available from: http://hdl.handle.net/1993/3209.

Council of Science Editors:

Cwikla M. The Low-Frequency Multi-Level Fast Multipole Method on Graphics Processors. [Masters Thesis]. University of Manitoba; 2009. Available from: http://hdl.handle.net/1993/3209

University of Debrecen

7. Jánosi, Zoltán. Alkalmazásfejlesztés GPU-ra .

Degree: DE – TEK – Informatikai Kar, 2013, University of Debrecen

URL: http://hdl.handle.net/2437/167193

► Az OpenCL a heterogén programozási platformok kihasználásának egyik legjobb eszköze. Ezen szakdolgozat bemutatja hogyan működik az OpenCL , illetve, hogy miként használhatóak legoptimálisabban az általa… (more)

Subjects/Keywords: OpenCL; GPU; GPGPU

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APA (6^th Edition):

Jánosi, Z. (2013). Alkalmazásfejlesztés GPU-ra . (Thesis). University of Debrecen. Retrieved from http://hdl.handle.net/2437/167193

Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation

Chicago Manual of Style (16^th Edition):

Jánosi, Zoltán. “Alkalmazásfejlesztés GPU-ra .” 2013. Thesis, University of Debrecen. Accessed September 21, 2018. http://hdl.handle.net/2437/167193.

Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation

MLA Handbook (7^th Edition):

Jánosi, Zoltán. “Alkalmazásfejlesztés GPU-ra .” 2013. Web. 21 Sep 2018.

Vancouver:

Jánosi Z. Alkalmazásfejlesztés GPU-ra . [Internet] [Thesis]. University of Debrecen; 2013. [cited 2018 Sep 21]. Available from: http://hdl.handle.net/2437/167193.

Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation

Council of Science Editors:

Jánosi Z. Alkalmazásfejlesztés GPU-ra . [Thesis]. University of Debrecen; 2013. Available from: http://hdl.handle.net/2437/167193

Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation

8. Rännare, Markus. Tolkningen av L-system i realtid på grafikkortet.

Degree: Humanities and Informatics, 2010, University of Skövde

URL: http://urn.kb.se/resolve?urn=urn:nbn:se:his:diva-4048

► Arbetet undersöker grafikkortets lämplighet att tolka L-system i realtid. L-system är ett strängomskrivningssystem som beskriver strukturen hos botaniska former. Lsystem tolkas med hjälp av… (more)

Subjects/Keywords: L-system; GPGPU; Turtle interpretation

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APA (6^th Edition):

Rännare, M. (2010). Tolkningen av L-system i realtid på grafikkortet. (Thesis). University of Skövde. Retrieved from http://urn.kb.se/resolve?urn=urn:nbn:se:his:diva-4048

Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation

Chicago Manual of Style (16^th Edition):

Rännare, Markus. “Tolkningen av L-system i realtid på grafikkortet.” 2010. Thesis, University of Skövde. Accessed September 21, 2018. http://urn.kb.se/resolve?urn=urn:nbn:se:his:diva-4048.

Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation

MLA Handbook (7^th Edition):

Rännare, Markus. “Tolkningen av L-system i realtid på grafikkortet.” 2010. Web. 21 Sep 2018.

Vancouver:

Rännare M. Tolkningen av L-system i realtid på grafikkortet. [Internet] [Thesis]. University of Skövde; 2010. [cited 2018 Sep 21]. Available from: http://urn.kb.se/resolve?urn=urn:nbn:se:his:diva-4048.

Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation

Council of Science Editors:

Rännare M. Tolkningen av L-system i realtid på grafikkortet. [Thesis]. University of Skövde; 2010. Available from: http://urn.kb.se/resolve?urn=urn:nbn:se:his:diva-4048

Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation

Rochester Institute of Technology

9. Brandt, Dan. Investigation of GPGPU for use in processing of EEG in real-time.

Degree: Computer Engineering, 2010, Rochester Institute of Technology

URL: http://scholarworks.rit.edu/theses/3211

► The purpose of this thesis was to investigate the use of General Purpose computing on Graphics Processing Units (GPGPU) to process electroencephalogram (EEG) signals in… (more)

Subjects/Keywords: GPGPU; Independent component analysis

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APA (6^th Edition):

Brandt, D. (2010). Investigation of GPGPU for use in processing of EEG in real-time. (Thesis). Rochester Institute of Technology. Retrieved from http://scholarworks.rit.edu/theses/3211

Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation

Chicago Manual of Style (16^th Edition):

Brandt, Dan. “Investigation of GPGPU for use in processing of EEG in real-time.” 2010. Thesis, Rochester Institute of Technology. Accessed September 21, 2018. http://scholarworks.rit.edu/theses/3211.

Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation

MLA Handbook (7^th Edition):

Brandt, Dan. “Investigation of GPGPU for use in processing of EEG in real-time.” 2010. Web. 21 Sep 2018.

Vancouver:

Brandt D. Investigation of GPGPU for use in processing of EEG in real-time. [Internet] [Thesis]. Rochester Institute of Technology; 2010. [cited 2018 Sep 21]. Available from: http://scholarworks.rit.edu/theses/3211.

Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation

Council of Science Editors:

Brandt D. Investigation of GPGPU for use in processing of EEG in real-time. [Thesis]. Rochester Institute of Technology; 2010. Available from: http://scholarworks.rit.edu/theses/3211

Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation

University of Toronto

10. Choong, Alexander. Parallelizing Simulated Annealing Placement for GPGPU.

Degree: 2010, University of Toronto

URL: http://hdl.handle.net/1807/25456

►

Field Programmable Gate Array (FPGA) devices are increasing in capacity at an exponential rate, and thus there is an increasingly strong demand to accelerate simulated… (more)

Subjects/Keywords: FPGA Placement; GPGPU; 0544

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APA (6^th Edition):

Choong, A. (2010). Parallelizing Simulated Annealing Placement for GPGPU. (Masters Thesis). University of Toronto. Retrieved from http://hdl.handle.net/1807/25456

Chicago Manual of Style (16^th Edition):

Choong, Alexander. “Parallelizing Simulated Annealing Placement for GPGPU.” 2010. Masters Thesis, University of Toronto. Accessed September 21, 2018. http://hdl.handle.net/1807/25456.

MLA Handbook (7^th Edition):

Choong, Alexander. “Parallelizing Simulated Annealing Placement for GPGPU.” 2010. Web. 21 Sep 2018.

Vancouver:

Choong A. Parallelizing Simulated Annealing Placement for GPGPU. [Internet] [Masters thesis]. University of Toronto; 2010. [cited 2018 Sep 21]. Available from: http://hdl.handle.net/1807/25456.

Council of Science Editors:

Choong A. Parallelizing Simulated Annealing Placement for GPGPU. [Masters Thesis]. University of Toronto; 2010. Available from: http://hdl.handle.net/1807/25456

Virginia Tech

11. Ponce, Sean Philip. Towards Algorithm Transformation for Temporal Data Mining on GPU.

Degree: Computer Science, 2009, Virginia Tech

URL: http://hdl.handle.net/10919/34387

► Data Mining allows one to analyze large amounts of data. With increasing amounts of data being collected, more computing power is needed to mine these… (more)

Subjects/Keywords: CUDA; GPGPU; temporal data mining

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APA (6^th Edition):

Ponce, S. P. (2009). Towards Algorithm Transformation for Temporal Data Mining on GPU. (Thesis). Virginia Tech. Retrieved from http://hdl.handle.net/10919/34387

Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation

Chicago Manual of Style (16^th Edition):

Ponce, Sean Philip. “Towards Algorithm Transformation for Temporal Data Mining on GPU.” 2009. Thesis, Virginia Tech. Accessed September 21, 2018. http://hdl.handle.net/10919/34387.

Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation

MLA Handbook (7^th Edition):

Ponce, Sean Philip. “Towards Algorithm Transformation for Temporal Data Mining on GPU.” 2009. Web. 21 Sep 2018.

Vancouver:

Ponce SP. Towards Algorithm Transformation for Temporal Data Mining on GPU. [Internet] [Thesis]. Virginia Tech; 2009. [cited 2018 Sep 21]. Available from: http://hdl.handle.net/10919/34387.

Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation

Council of Science Editors:

Ponce SP. Towards Algorithm Transformation for Temporal Data Mining on GPU. [Thesis]. Virginia Tech; 2009. Available from: http://hdl.handle.net/10919/34387

Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation

Louisiana State University

12. Sims, Gillian David. Parallel cloth simulation using OpenMp and CUDA.

Degree: PhD, Human Ecology, 2009, Louisiana State University

URL: etd-11102009-150925 ; https://digitalcommons.lsu.edu/gradschool_dissertations/3067

► The widespread availability of parallel computing architectures has lead to research regarding algorithms and techniques that best exploit available parallelism. In addition to the CPU… (more)

▼ The widespread availability of parallel computing architectures has lead to research regarding algorithms and techniques that best exploit available parallelism. In addition to the CPU parallelism available; the GPU has emerged as a parallel computational device. The goal of this study was to explore the combined use of CPU and GPU parallelism by developing a hybrid parallel CPU/GPU cloth simulation application. In order to evaluate the benefits of the hybrid approach, the application was first developed in sequential CPU form, followed by a parallel CPU form. The application uses Backward Euler implicit time integration to solve the differential equations of motion associated with the physical system. The Conjugate Gradient (CG) algorithm is used to determine the solution vector for the system of equations formed by the Backward Euler approach. The matrix/vector, vector/vector, and vector/scalar operations required by CG are handled by calls to BLAS level 1 and level 2 functions. In the sequential CPU and parallel CPU versions, the Intel Math Kernel Library implementation of BLAS is used. In the hybrid parallel CPU/GPU version, the Nvidia CUDA based BLAS implementation (CUBLAS) is used. In the parallel CPU and hybrid implementations, OpenMP directives are used to parallelize the force application loop that traverses the list of forces acting on the system. Runtimes were collected for each version of the application while simulating cloth meshes with particle resolutions of 20x20, 40x40, and 60x60. The performance of each version was compared at each mesh resolution. The level of performance degradation experienced when transitioning to the larger mesh sizes was also determined. The hybrid parallel CPU/GPU implementation yielded the highest frame rate for the 40x40 and 60x60 meshes. The parallel CPU implementation yielded the highest frame rate for the 20x20 mesh. The performance of the hybrid parallel CPU/GPU implementation degraded the least as it transitioned to the two larger mesh sizes. The results of this study will potentially lead to further research regarding the use of GPUs to perform the matrix/vector operations associated with the CG algorithm under more complex cloth simulation scenarios.

Subjects/Keywords: Cloth Simulation; GPGPU; CUDA; CUBLAS

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APA (6^th Edition):

Sims, G. D. (2009). Parallel cloth simulation using OpenMp and CUDA. (Doctoral Dissertation). Louisiana State University. Retrieved from etd-11102009-150925 ; https://digitalcommons.lsu.edu/gradschool_dissertations/3067

Chicago Manual of Style (16^th Edition):

Sims, Gillian David. “Parallel cloth simulation using OpenMp and CUDA.” 2009. Doctoral Dissertation, Louisiana State University. Accessed September 21, 2018. etd-11102009-150925 ; https://digitalcommons.lsu.edu/gradschool_dissertations/3067.

MLA Handbook (7^th Edition):

Sims, Gillian David. “Parallel cloth simulation using OpenMp and CUDA.” 2009. Web. 21 Sep 2018.

Vancouver:

Sims GD. Parallel cloth simulation using OpenMp and CUDA. [Internet] [Doctoral dissertation]. Louisiana State University; 2009. [cited 2018 Sep 21]. Available from: etd-11102009-150925 ; https://digitalcommons.lsu.edu/gradschool_dissertations/3067.

Council of Science Editors:

Sims GD. Parallel cloth simulation using OpenMp and CUDA. [Doctoral Dissertation]. Louisiana State University; 2009. Available from: etd-11102009-150925 ; https://digitalcommons.lsu.edu/gradschool_dissertations/3067

University of Notre Dame

13. Wenzhao Sun. A Computational Model for Developmental Biology with Parallel Implementation on Graphical Processing Unit.

Degree: PhD, Applied and Computational Mathematics and Statistics, 2015, University of Notre Dame

URL: https://curate.nd.edu/show/xd07gq70365

► An epithelium is a sheet of constantly growing cells that strongly adhere to their neighbors. Studying mechanisms that regulate the growth of epithelium is… (more)

▼ An epithelium is a sheet of constantly growing cells that strongly adhere to their neighbors. Studying mechanisms that regulate the growth of epithelium is important for both understanding of development in general and finding solutions for diseases. The regulation of cell growth and division is one of the key mechanisms that ensure proper development of living organisms. Compromised regulation of proliferation could lead to cancer, which often starts from epithelial cells. Despite their importance, the exact mechanisms that control proliferation is still under debate. Some believe that mechanical feedback plays the most important role in growth regulation, while others believe that signaling molecules could be responsible for regulation of growth pattern. Computational modeling is used in this study to provide new insights into cellular growth regulation. Up to date, various approaches have been employed to model the proliferation of epithelial cells. There are topological models that emphasize cellular connectivity, lattice-based models that use fixed lattice to represent cells, and off-lattice models that describe cells by collection of connected points. However, existing models are insufficient to capture mechanical properties of the epithelial sheet, partially because of the artificially imposed geometrical constraints, which often restrict cells to be polygon-shaped. Moreover, the mechanical interaction between cells might be over-simplified because of this approximation. A novel cell-based off-lattice computational model for studying epithelial proliferation is developed in this study. The model provides a flexible representation for cellular geometry, without imposing assumption of polygon cell shape. Epithelial cells appear as polygon-shaped in model simulations as a result of mechanical interaction. Cellular network transitions in model simulations also naturally emerge as a result of cellular interaction, compared with existing models which often include ad hoc assumptions for such transitions. Results in the ESEM simulations match very well with experimental findings, such as overall cell shape polygon class distribution on the epithelial sheet, and the shifting of polygon class during mitosis. It is also worth mentioning that the new model reproduces mitotic rounding behavior in proliferating epithelia, which is commonly observed but never been modeled in other computational models. In addition, this thesis introduces a parallel algorithm that runs on General Purpose Graphical Processing Unit for model implementation, overcoming computational challenges brought by the new model. A complete source code package of the parallel algorithm is provided as a supplement of this thesis for future extension and development of the model. This work was supported in part by the National Science Foundation grant CBET 1403887. Advisors/Committee Members: Jeremiah.Zartman, Committee Member, Martina.Bukac, Committee Member, Mark Alber, Committee Member, Zhiliang Xu, Committee Chair.

Subjects/Keywords: computational model; proliferation; epithelia; GPGPU

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APA (6^th Edition):

Sun, W. (2015). A Computational Model for Developmental Biology with Parallel Implementation on Graphical Processing Unit. (Doctoral Dissertation). University of Notre Dame. Retrieved from https://curate.nd.edu/show/xd07gq70365

Chicago Manual of Style (16^th Edition):

Sun, Wenzhao. “A Computational Model for Developmental Biology with Parallel Implementation on Graphical Processing Unit.” 2015. Doctoral Dissertation, University of Notre Dame. Accessed September 21, 2018. https://curate.nd.edu/show/xd07gq70365.

MLA Handbook (7^th Edition):

Sun, Wenzhao. “A Computational Model for Developmental Biology with Parallel Implementation on Graphical Processing Unit.” 2015. Web. 21 Sep 2018.

Vancouver:

Sun W. A Computational Model for Developmental Biology with Parallel Implementation on Graphical Processing Unit. [Internet] [Doctoral dissertation]. University of Notre Dame; 2015. [cited 2018 Sep 21]. Available from: https://curate.nd.edu/show/xd07gq70365.

Council of Science Editors:

Sun W. A Computational Model for Developmental Biology with Parallel Implementation on Graphical Processing Unit. [Doctoral Dissertation]. University of Notre Dame; 2015. Available from: https://curate.nd.edu/show/xd07gq70365

University of Notre Dame

14. Peter James Bui. AIR: Accelerated Image Registration.

Degree: MSin Computer Science and Engineering, Computer Science and Engineering, 2010, University of Notre Dame

URL: https://curate.nd.edu/show/d217qn61s8s

► This thesis presents a performance analysis of an accelerated 2-D rigid image registration implementation that employs the Compute Unified Device Architecture (CUDA) programming environment… (more)

Subjects/Keywords: gpgpu; performance analysis; image registration

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APA · Chicago · MLA · Vancouver · CSE | Export to Zotero / EndNote / Reference Manager

APA (6^th Edition):

Bui, P. J. (2010). AIR: Accelerated Image Registration. (Masters Thesis). University of Notre Dame. Retrieved from https://curate.nd.edu/show/d217qn61s8s

Chicago Manual of Style (16^th Edition):

Bui, Peter James. “AIR: Accelerated Image Registration.” 2010. Masters Thesis, University of Notre Dame. Accessed September 21, 2018. https://curate.nd.edu/show/d217qn61s8s.

MLA Handbook (7^th Edition):

Bui, Peter James. “AIR: Accelerated Image Registration.” 2010. Web. 21 Sep 2018.

Vancouver:

Bui PJ. AIR: Accelerated Image Registration. [Internet] [Masters thesis]. University of Notre Dame; 2010. [cited 2018 Sep 21]. Available from: https://curate.nd.edu/show/d217qn61s8s.

Council of Science Editors:

Bui PJ. AIR: Accelerated Image Registration. [Masters Thesis]. University of Notre Dame; 2010. Available from: https://curate.nd.edu/show/d217qn61s8s

University of Debrecen

15. Szabó, Levente. Párhuzamos programozás GPU segítségével .

Degree: DE – TEK – Informatikai Kar, 2013, University of Debrecen

URL: http://hdl.handle.net/2437/169850

► A szakdolgozatom témáját azért választottam, mert már korábban is használtam GPU-val gyorsított programokat. Video vágó, képszerkesztő és 3D képszerkesztő programok között egyre jobban népszerűbbé vált… (more)

▼ A szakdolgozatom témáját azért választottam, mert már korábban is használtam GPU-val gyorsított programokat. Video vágó, képszerkesztő és 3D képszerkesztő programok között egyre jobban népszerűbbé vált a párhuzamosítás és a videokártyák teljesítményének kihasználása. Nem sokkal ezek megjelenése után el kezdett érdekelni ezek működésének a háttere, hogy mégis hogyan valósítják meg, miben különbözik egy párhuzamosított program egy sima kódtól. Laptop vásárlásnál is fő szempont volt, hogy NVIDIA videokártyával rendelkezzen, hiszen ez a legelterjedtebb a párhuzamosítási eszközök között. Egy ideig nem is tudtam, hogy mit fogok választani szakdolgozatnak, mert a diploma munka listából egyik téma se fogott meg igazán. Mikor megismerkedtem a CUDA programozással tudtam, hogy ezt a témát szeretném elfogadtatni valamelyik tanárral. Miután Dr. Szabó István Tanár Úr beleegyezett, hogy választhatom ezt a témát nála, nem sokkal később a részleteket is megbeszéltük. Sok féle programozási problémát lehet párhuzamosítani, de mi a hővezetés és hőátadás szimulálását választottuk. Az oka az volt, hogy ez egy olyan probléma, amit viszonylag könnyen meg lehet valósítani, mégis nagy számítás igényű, és a gyakorlatban is jól fel lehet használni. Bár a szakdolgozat az épületek falainak hővezetésére korlátozódik, sok más hővezetéssel kapcsolatos problémákra is át lehet ültetni. A szakdolgozat két fő részre osztható. Lényegi része a párhuzamos programozás GPU segítségével. Ez egy hővezetés és hőátadási szimuláció által van bemutatva. A gyorsaság demonstrálására és ellenőrzés szempontjából két program lett megírva, egy CPU-ra és egy pedig GPU-ra. Hogy viszonylag egyenlő eséllyel induljon a két program, mindkettő kihasználja a párhuzamosítás előnyeit. Advisors/Committee Members: Szabó, István (advisor).

Subjects/Keywords: CUDA; GPGPU; párhuzamos programozás; hővezetés

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APA · Chicago · MLA · Vancouver · CSE | Export to Zotero / EndNote / Reference Manager

APA (6^th Edition):

Szabó, L. (2013). Párhuzamos programozás GPU segítségével . (Thesis). University of Debrecen. Retrieved from http://hdl.handle.net/2437/169850

Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation

Chicago Manual of Style (16^th Edition):

Szabó, Levente. “Párhuzamos programozás GPU segítségével .” 2013. Thesis, University of Debrecen. Accessed September 21, 2018. http://hdl.handle.net/2437/169850.

Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation

MLA Handbook (7^th Edition):

Szabó, Levente. “Párhuzamos programozás GPU segítségével .” 2013. Web. 21 Sep 2018.

Vancouver:

Szabó L. Párhuzamos programozás GPU segítségével . [Internet] [Thesis]. University of Debrecen; 2013. [cited 2018 Sep 21]. Available from: http://hdl.handle.net/2437/169850.

Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation

Council of Science Editors:

Szabó L. Párhuzamos programozás GPU segítségével . [Thesis]. University of Debrecen; 2013. Available from: http://hdl.handle.net/2437/169850

Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation

Clemson University

16. Rayrikar, Bhushan. Parallel Implementation of the Singular Value Decomposition using OpenCL.

Degree: MS, Computer Engineering, 2011, Clemson University

URL: https://tigerprints.clemson.edu/all_theses/1292

► General-Purpose Graphics Processing Units (GPGPUs) have massively parallel computational capabilities. Low cost and ease of programming make them a popular choice over other parallel architectures… (more)

▼ General-Purpose Graphics Processing Units (GPGPUs) have massively parallel computational capabilities. Low cost and ease of programming make them a popular choice over other parallel architectures such as large clusters and accelerators such as Field-Programmable Gate Arrays (FPGAs). Mature programming frameworks for GPGPUs, such as CUDA from Nvidia and OpenCL from the Khronos Group, reduce the learning curve and development time for programming GPGPU architectures. OpenCL, a relatively new industry standard for parallel computing makes it possible to write a single program for heterogeneous platforms that is portable across multiple platforms including GPGPUs and multi-core processors with minimal coding modifications. GPGPU architectures have been successfully used for accelerating many computationally expensive problems including many linear algebra algorithms, which are inherently parallel in nature. Singular Value Decomposition (SVD) is a computationally expensive linear algebra matrix decomposition technique that has many applications including data compression, facial recognition, and solving a system of equations. As the dimensions of the matrix increase, SVD computation becomes increasingly time consuming. Since SVD is a major part of some algorithms such as Eigenfaces (a facial recognition algorithm based on Principle Component Analysis), the overall runtime for these algorithms depends heavily on the execution time of SVD. Hence, to implement efficient applications based on SVD, for example real-time facial recognition, it is desirable to accelerate the SVD algorithm. In this work, a parallel implementation of Singular Value Decomposition is discussed in detail. It uses many basic linear algebra techniques such as matrix-vector multiplication, vector norms and vector outer products. This work focuses on the implementation techniques, optimization methods (specifically for a GPGPU implementation) and their effect on the overall performance of the algorithm. We present the performance analysis of this algorithm on NVIDIA's Tesla C2050 GPU as compared to the single-threaded serial implementation executed on an Intel 2.66 GHz Q9450 processor. We report speedups up to 20x for the parallel SVD computation. The results discussed in this thesis demonstrate the potential of the computational resources available with GPGPUs. Advisors/Committee Members: Smith, Melissa, Birchfield , Stanley, Gowdy , John.

Subjects/Keywords: GPGPU; OpenCL; SVD; Computer Engineering

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APA · Chicago · MLA · Vancouver · CSE | Export to Zotero / EndNote / Reference Manager

APA (6^th Edition):

Rayrikar, B. (2011). Parallel Implementation of the Singular Value Decomposition using OpenCL. (Masters Thesis). Clemson University. Retrieved from https://tigerprints.clemson.edu/all_theses/1292

Chicago Manual of Style (16^th Edition):

Rayrikar, Bhushan. “Parallel Implementation of the Singular Value Decomposition using OpenCL.” 2011. Masters Thesis, Clemson University. Accessed September 21, 2018. https://tigerprints.clemson.edu/all_theses/1292.

MLA Handbook (7^th Edition):

Rayrikar, Bhushan. “Parallel Implementation of the Singular Value Decomposition using OpenCL.” 2011. Web. 21 Sep 2018.

Vancouver:

Rayrikar B. Parallel Implementation of the Singular Value Decomposition using OpenCL. [Internet] [Masters thesis]. Clemson University; 2011. [cited 2018 Sep 21]. Available from: https://tigerprints.clemson.edu/all_theses/1292.

Council of Science Editors:

Rayrikar B. Parallel Implementation of the Singular Value Decomposition using OpenCL. [Masters Thesis]. Clemson University; 2011. Available from: https://tigerprints.clemson.edu/all_theses/1292

University of Waterloo

17. Berkovich, Shay. Parallel Run-Time Verification.

Degree: 2013, University of Waterloo

URL: http://hdl.handle.net/10012/7252

► Run-time verification is a technique to reason about a program correctness. Given a set of desirable properties and a program trace from the inspected program… (more)

Subjects/Keywords: verification; GPGPU; monitoring; LTL

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APA (6^th Edition):

Berkovich, S. (2013). Parallel Run-Time Verification. (Thesis). University of Waterloo. Retrieved from http://hdl.handle.net/10012/7252

Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation

Chicago Manual of Style (16^th Edition):

Berkovich, Shay. “Parallel Run-Time Verification.” 2013. Thesis, University of Waterloo. Accessed September 21, 2018. http://hdl.handle.net/10012/7252.

Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation

MLA Handbook (7^th Edition):

Berkovich, Shay. “Parallel Run-Time Verification.” 2013. Web. 21 Sep 2018.

Vancouver:

Berkovich S. Parallel Run-Time Verification. [Internet] [Thesis]. University of Waterloo; 2013. [cited 2018 Sep 21]. Available from: http://hdl.handle.net/10012/7252.

Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation

Council of Science Editors:

Berkovich S. Parallel Run-Time Verification. [Thesis]. University of Waterloo; 2013. Available from: http://hdl.handle.net/10012/7252

Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation

18. Andersson, Filip. GPGPU-Sim.

Degree: The Institute of Technology, 2014, Linköping UniversityLinköping University

URL: http://urn.kb.se/resolve?urn=urn:nbn:se:liu:diva-112574

► This thesis studies the impact of hardware features of graphics cards on performance of GPU computing using GPGPU-Sim simulation software tool. GPU computing is… (more)

Subjects/Keywords: GPGPU-Sim; Simulator; GPU computing

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APA (6^th Edition):

Andersson, F. (2014). GPGPU-Sim. (Thesis). Linköping UniversityLinköping University. Retrieved from http://urn.kb.se/resolve?urn=urn:nbn:se:liu:diva-112574

Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation

Chicago Manual of Style (16^th Edition):

Andersson, Filip. “GPGPU-Sim.” 2014. Thesis, Linköping UniversityLinköping University. Accessed September 21, 2018. http://urn.kb.se/resolve?urn=urn:nbn:se:liu:diva-112574.

Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation

MLA Handbook (7^th Edition):

Andersson, Filip. “GPGPU-Sim.” 2014. Web. 21 Sep 2018.

Vancouver:

Andersson F. GPGPU-Sim. [Internet] [Thesis]. Linköping UniversityLinköping University; 2014. [cited 2018 Sep 21]. Available from: http://urn.kb.se/resolve?urn=urn:nbn:se:liu:diva-112574.

Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation

Council of Science Editors:

Andersson F. GPGPU-Sim. [Thesis]. Linköping UniversityLinköping University; 2014. Available from: http://urn.kb.se/resolve?urn=urn:nbn:se:liu:diva-112574

Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation

Delft University of Technology

19. Hemminga, S. Programmability Analysis of Image Processing Kernels on Multi-/Many-core Platforms :.

Degree: 2011, Delft University of Technology

URL: http://resolver.tudelft.nl/uuid:7efbc439-7a08-40f4-8a07-94879de2eba7

► In the last few years, the computing industry has changed its course from ever higher clock speeds to multi- and many-core systems. These new parallel… (more)

Subjects/Keywords: OpenCL; GPU; GPGPU; Cell BE

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APA (6^th Edition):

Hemminga, S. (2011). Programmability Analysis of Image Processing Kernels on Multi-/Many-core Platforms :. (Masters Thesis). Delft University of Technology. Retrieved from http://resolver.tudelft.nl/uuid:7efbc439-7a08-40f4-8a07-94879de2eba7

Chicago Manual of Style (16^th Edition):

Hemminga, S. “Programmability Analysis of Image Processing Kernels on Multi-/Many-core Platforms :.” 2011. Masters Thesis, Delft University of Technology. Accessed September 21, 2018. http://resolver.tudelft.nl/uuid:7efbc439-7a08-40f4-8a07-94879de2eba7.

MLA Handbook (7^th Edition):

Hemminga, S. “Programmability Analysis of Image Processing Kernels on Multi-/Many-core Platforms :.” 2011. Web. 21 Sep 2018.

Vancouver:

Hemminga S. Programmability Analysis of Image Processing Kernels on Multi-/Many-core Platforms :. [Internet] [Masters thesis]. Delft University of Technology; 2011. [cited 2018 Sep 21]. Available from: http://resolver.tudelft.nl/uuid:7efbc439-7a08-40f4-8a07-94879de2eba7.

Council of Science Editors:

Hemminga S. Programmability Analysis of Image Processing Kernels on Multi-/Many-core Platforms :. [Masters Thesis]. Delft University of Technology; 2011. Available from: http://resolver.tudelft.nl/uuid:7efbc439-7a08-40f4-8a07-94879de2eba7

Texas A&M University

20. Yuan, Wen. Hybrid Nanophotonic NOC Design for GPGPU.

Degree: 2012, Texas A&M University

URL: http://hdl.handle.net/1969.1/ETD-TAMU-2012-05-10913

► Due to the massive computational power, Graphics Processing Units (GPUs) have become a popular platform for executing general purpose parallel applications. The majority of on-chip… (more)

Subjects/Keywords: NoC; GPGPU; Topology Design; Nanophotonics

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APA · Chicago · MLA · Vancouver · CSE | Export to Zotero / EndNote / Reference Manager

APA (6^th Edition):

Yuan, W. (2012). Hybrid Nanophotonic NOC Design for GPGPU. (Thesis). Texas A&M University. Retrieved from http://hdl.handle.net/1969.1/ETD-TAMU-2012-05-10913

Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation

Chicago Manual of Style (16^th Edition):

Yuan, Wen. “Hybrid Nanophotonic NOC Design for GPGPU.” 2012. Thesis, Texas A&M University. Accessed September 21, 2018. http://hdl.handle.net/1969.1/ETD-TAMU-2012-05-10913.

Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation

MLA Handbook (7^th Edition):

Yuan, Wen. “Hybrid Nanophotonic NOC Design for GPGPU.” 2012. Web. 21 Sep 2018.

Vancouver:

Yuan W. Hybrid Nanophotonic NOC Design for GPGPU. [Internet] [Thesis]. Texas A&M University; 2012. [cited 2018 Sep 21]. Available from: http://hdl.handle.net/1969.1/ETD-TAMU-2012-05-10913.

Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation

Council of Science Editors:

Yuan W. Hybrid Nanophotonic NOC Design for GPGPU. [Thesis]. Texas A&M University; 2012. Available from: http://hdl.handle.net/1969.1/ETD-TAMU-2012-05-10913

Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation

Oklahoma State University

21. Gordon, Brian Patrick. GPGPU Programming and the Pitfalls of Nave Data Handling.

Degree: School of Electrical & Computer Engineering, 2010, Oklahoma State University

URL: http://hdl.handle.net/11244/10206

► The purpose of this study was to implement a known bottleneck of a model based video encoder in code that runs on a modern graphics… (more)

Subjects/Keywords: cuda; gpgpu; graphic shaders

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APA (6^th Edition):

Gordon, B. P. (2010). GPGPU Programming and the Pitfalls of Nave Data Handling. (Thesis). Oklahoma State University. Retrieved from http://hdl.handle.net/11244/10206

Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation

Chicago Manual of Style (16^th Edition):

Gordon, Brian Patrick. “GPGPU Programming and the Pitfalls of Nave Data Handling.” 2010. Thesis, Oklahoma State University. Accessed September 21, 2018. http://hdl.handle.net/11244/10206.

Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation

MLA Handbook (7^th Edition):

Gordon, Brian Patrick. “GPGPU Programming and the Pitfalls of Nave Data Handling.” 2010. Web. 21 Sep 2018.

Vancouver:

Gordon BP. GPGPU Programming and the Pitfalls of Nave Data Handling. [Internet] [Thesis]. Oklahoma State University; 2010. [cited 2018 Sep 21]. Available from: http://hdl.handle.net/11244/10206.

Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation

Council of Science Editors:

Gordon BP. GPGPU Programming and the Pitfalls of Nave Data Handling. [Thesis]. Oklahoma State University; 2010. Available from: http://hdl.handle.net/11244/10206

Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation

Brno University of Technology

22. Izrael, Petr. SAT Solver akcelerovaný pomocí GPU .

Degree: 2013, Brno University of Technology

URL: http://hdl.handle.net/11012/53479

► Práce se zabývá návrhem a implementací kompletního SAT solveru akcelerovaného na GPU. V první části práce je popsána architektura grafických karet a možnosti platformy CUDA.… (more)

Subjects/Keywords: SAT; DPLL; CUDA; GPU; GPGPU; SAT; DPLL; CUDA; GPU; GPGPU

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APA · Chicago · MLA · Vancouver · CSE | Export to Zotero / EndNote / Reference Manager

APA (6^th Edition):

Izrael, P. (2013). SAT Solver akcelerovaný pomocí GPU . (Thesis). Brno University of Technology. Retrieved from http://hdl.handle.net/11012/53479

Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation

Chicago Manual of Style (16^th Edition):

Izrael, Petr. “SAT Solver akcelerovaný pomocí GPU .” 2013. Thesis, Brno University of Technology. Accessed September 21, 2018. http://hdl.handle.net/11012/53479.

Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation

MLA Handbook (7^th Edition):

Izrael, Petr. “SAT Solver akcelerovaný pomocí GPU .” 2013. Web. 21 Sep 2018.

Vancouver:

Izrael P. SAT Solver akcelerovaný pomocí GPU . [Internet] [Thesis]. Brno University of Technology; 2013. [cited 2018 Sep 21]. Available from: http://hdl.handle.net/11012/53479.

Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation

Council of Science Editors:

Izrael P. SAT Solver akcelerovaný pomocí GPU . [Thesis]. Brno University of Technology; 2013. Available from: http://hdl.handle.net/11012/53479

Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation

Université de Grenoble

23. Horrein, Pierre-Henri. Architectures logicielles pour la radio flexible : intégration d'unités de calcul hétérogènes : Software design for flexible radio : integration of heterogeneous computing units.

Degree: Docteur es, Informatique, 2012, Université de Grenoble

URL: http://www.theses.fr/2012GRENM003

►

L'utilisation de la radio flexible permet d'envisager des réseaux sans fil évolutifs, plus efficaces et plus intelligents. Le terme «~radio flexible~» est un terme très… (more)

▼

L'utilisation de la radio flexible permet d'envisager des réseaux sans fil évolutifs, plus efficaces et plus intelligents. Le terme «~radio flexible~» est un terme très général, qui peut s'appliquer à une implanta- tion logicielle des opérations, à une implantation matérielle adaptable basée sur des accélérateurs matériels, ou encore à des implantations mixtes. Il regroupe en fait toutes les implantations de terminaux radio qui ne sont pas figées. Les travaux réalisés durant cette thèse tournent autour de deux points. Le premier est l'utilisation des processeurs graphiques pour la radio flexible, et plus particulièrement pour la radio logicielle. Ces cibles offrent des performances impressionnantes en termes de débit brut de calcul, en se basant sur architecture massivement parallèle. Le parallélisme de données utilisé dans ces processeurs diffère cependant du parallélisme de tâches souvent exploitées dans les applications de radio logicielle. Différentes approches pour résoudre ce problème sont étudiées. Les résultats obtenus sur ce point permettent une nette amélioration du débit de calcul atteignable avec une implantation logicielle, tout en libérant le processeur pour d'autres tâches. Le deuxième point abordé dans cette étude concerne la définition d'un environnement perme- ttant de supporter différentes possibilités d'implantation de la radio flexible. Cet environnement englobe le support de la plateforme hétérogène, et la gestion des applications sur ces plateformes. Bien qu'encore expérimental, les premiers résultats obtenus avec l'environnement montrent ses capacités d'adaptation, et le rendent utilisable pour des applications radio variées sur des plateformes hétérogènes.

The development of flexible radio leads to evolving wireless networks. This character- istic enables more efficient and smarter networks. Flexible radio is not a precise definition. It can be used to describe a software implementation of radio operations, as well as a hardware implementation based on configurable hardware coprocessors. It can also refer to heterogeneous implementations. It describes any implementation which can evolve. During this PhD, we focused on two different aspects of flexible radio. First, the use of graphi- cal processors for flexible radio (and especially software radio) is studied. These execution targets enable impressive performances, when studying raw attainable processing throughput, through the use of massively parallel architectures. The problem is that the data parallelism exhibited by these processors does not match the task parallelism of software radio applications. Different approaches to correct this mismatch are studied in this work. The displayed results show an improvement in the at- tainable software implementation, while letting the processor process other tasks. The other issue addressed in this work is the definition of an environment able to support dif- ferent implementation choices for flexible radio. Support for multiple implementations includes heterogeneous platforms support, as well as…

Advisors/Committee Members: Pétrot, Frédéric (thesis director).

Subjects/Keywords: Radio Flexible; Environnement; GPGPU; Plateformes hétérogènes; Flexible Radio; GPGPU; Heterogeneous MPSoC

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APA (6^th Edition):

Horrein, P. (2012). Architectures logicielles pour la radio flexible : intégration d'unités de calcul hétérogènes : Software design for flexible radio : integration of heterogeneous computing units. (Doctoral Dissertation). Université de Grenoble. Retrieved from http://www.theses.fr/2012GRENM003

Chicago Manual of Style (16^th Edition):

Horrein, Pierre-Henri. “Architectures logicielles pour la radio flexible : intégration d'unités de calcul hétérogènes : Software design for flexible radio : integration of heterogeneous computing units.” 2012. Doctoral Dissertation, Université de Grenoble. Accessed September 21, 2018. http://www.theses.fr/2012GRENM003.

MLA Handbook (7^th Edition):

Horrein, Pierre-Henri. “Architectures logicielles pour la radio flexible : intégration d'unités de calcul hétérogènes : Software design for flexible radio : integration of heterogeneous computing units.” 2012. Web. 21 Sep 2018.

Vancouver:

Horrein P. Architectures logicielles pour la radio flexible : intégration d'unités de calcul hétérogènes : Software design for flexible radio : integration of heterogeneous computing units. [Internet] [Doctoral dissertation]. Université de Grenoble; 2012. [cited 2018 Sep 21]. Available from: http://www.theses.fr/2012GRENM003.

Council of Science Editors:

Horrein P. Architectures logicielles pour la radio flexible : intégration d'unités de calcul hétérogènes : Software design for flexible radio : integration of heterogeneous computing units. [Doctoral Dissertation]. Université de Grenoble; 2012. Available from: http://www.theses.fr/2012GRENM003

Brno University of Technology

24. Schreiber, Petr. Realizace vybraných výpočtů pomocí grafických karet .

Degree: 2010, Brno University of Technology

URL: http://hdl.handle.net/11012/3314

► Práce pojednává o současných možnostech využití grafického hardware jakožto platformy pro provádění paralelních výpočtů. Text se zaměřuje na novou technologii OpenCL, která umožňuje pomocí stejného… (more)

Subjects/Keywords: grafická karta; paralelní výpočet; GPGPU; graphic card; parallel computation; GPGPU

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APA (6^th Edition):

Schreiber, P. (2010). Realizace vybraných výpočtů pomocí grafických karet . (Thesis). Brno University of Technology. Retrieved from http://hdl.handle.net/11012/3314

Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation

Chicago Manual of Style (16^th Edition):

Schreiber, Petr. “Realizace vybraných výpočtů pomocí grafických karet .” 2010. Thesis, Brno University of Technology. Accessed September 21, 2018. http://hdl.handle.net/11012/3314.

Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation

MLA Handbook (7^th Edition):

Schreiber, Petr. “Realizace vybraných výpočtů pomocí grafických karet .” 2010. Web. 21 Sep 2018.

Vancouver:

Schreiber P. Realizace vybraných výpočtů pomocí grafických karet . [Internet] [Thesis]. Brno University of Technology; 2010. [cited 2018 Sep 21]. Available from: http://hdl.handle.net/11012/3314.

Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation

Council of Science Editors:

Schreiber P. Realizace vybraných výpočtů pomocí grafických karet . [Thesis]. Brno University of Technology; 2010. Available from: http://hdl.handle.net/11012/3314

Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation

California State University – Northridge

25. Abdelrahim, Mohammed. Adaptive and Hybrid Machine Learning Approaches Utilizing General Purpose Computing on Graphical Processing Units.

Degree: MS, Department of Computer Science, 2016, California State University – Northridge

URL: http://hdl.handle.net/10211.3/159698

► Unlike machines, humans and animals have very complex reasoning capability that allows them to adapt to changes in the naturally world, while computers tend to… (more)

Subjects/Keywords: GPGPU; Dissertations, Academic – CSUN – Computer Science.

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APA (6^th Edition):

Abdelrahim, M. (2016). Adaptive and Hybrid Machine Learning Approaches Utilizing General Purpose Computing on Graphical Processing Units. (Masters Thesis). California State University – Northridge. Retrieved from http://hdl.handle.net/10211.3/159698

Chicago Manual of Style (16^th Edition):

Abdelrahim, Mohammed. “Adaptive and Hybrid Machine Learning Approaches Utilizing General Purpose Computing on Graphical Processing Units.” 2016. Masters Thesis, California State University – Northridge. Accessed September 21, 2018. http://hdl.handle.net/10211.3/159698.

MLA Handbook (7^th Edition):

Abdelrahim, Mohammed. “Adaptive and Hybrid Machine Learning Approaches Utilizing General Purpose Computing on Graphical Processing Units.” 2016. Web. 21 Sep 2018.

Vancouver:

Abdelrahim M. Adaptive and Hybrid Machine Learning Approaches Utilizing General Purpose Computing on Graphical Processing Units. [Internet] [Masters thesis]. California State University – Northridge; 2016. [cited 2018 Sep 21]. Available from: http://hdl.handle.net/10211.3/159698.

Council of Science Editors:

Abdelrahim M. Adaptive and Hybrid Machine Learning Approaches Utilizing General Purpose Computing on Graphical Processing Units. [Masters Thesis]. California State University – Northridge; 2016. Available from: http://hdl.handle.net/10211.3/159698

Rochester Institute of Technology

26. Dumont, Michael. Markov chain Monte Carlo on the GPU.

Degree: Computer Science (GCCIS), 2011, Rochester Institute of Technology

URL: http://scholarworks.rit.edu/theses/83

► Markov chains are a useful tool in statistics that allow us to sample and model a large population of individuals. We can extend this idea… (more)

Subjects/Keywords: Approximation; GPGPU; GPU; Markov chain; Monte carlo

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APA (6^th Edition):

Dumont, M. (2011). Markov chain Monte Carlo on the GPU. (Thesis). Rochester Institute of Technology. Retrieved from http://scholarworks.rit.edu/theses/83

Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation

Chicago Manual of Style (16^th Edition):

Dumont, Michael. “Markov chain Monte Carlo on the GPU.” 2011. Thesis, Rochester Institute of Technology. Accessed September 21, 2018. http://scholarworks.rit.edu/theses/83.

Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation

MLA Handbook (7^th Edition):

Dumont, Michael. “Markov chain Monte Carlo on the GPU.” 2011. Web. 21 Sep 2018.

Vancouver:

Dumont M. Markov chain Monte Carlo on the GPU. [Internet] [Thesis]. Rochester Institute of Technology; 2011. [cited 2018 Sep 21]. Available from: http://scholarworks.rit.edu/theses/83.

Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation

Council of Science Editors:

Dumont M. Markov chain Monte Carlo on the GPU. [Thesis]. Rochester Institute of Technology; 2011. Available from: http://scholarworks.rit.edu/theses/83

Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation

Linnaeus University

27. Knapp, Christian. Creating Music Visualizations in a Mandelbrot Set Explorer.

Degree: Physics and Mathematics, 2012, Linnaeus University

URL: http://urn.kb.se/resolve?urn=urn:nbn:se:lnu:diva-21135

► The aim of this thesis is to implement a Mandelbrot Set Explorer that includes the functionality to create music visualizations. The Mandelbrot set is… (more)

Subjects/Keywords: mandelbrot; music; gpgpu; Computer Sciences; Datavetenskap (datalogi)

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APA (6^th Edition):

Knapp, C. (2012). Creating Music Visualizations in a Mandelbrot Set Explorer. (Thesis). Linnaeus University. Retrieved from http://urn.kb.se/resolve?urn=urn:nbn:se:lnu:diva-21135

Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation

Chicago Manual of Style (16^th Edition):

Knapp, Christian. “Creating Music Visualizations in a Mandelbrot Set Explorer.” 2012. Thesis, Linnaeus University. Accessed September 21, 2018. http://urn.kb.se/resolve?urn=urn:nbn:se:lnu:diva-21135.

Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation

MLA Handbook (7^th Edition):

Knapp, Christian. “Creating Music Visualizations in a Mandelbrot Set Explorer.” 2012. Web. 21 Sep 2018.

Vancouver:

Knapp C. Creating Music Visualizations in a Mandelbrot Set Explorer. [Internet] [Thesis]. Linnaeus University; 2012. [cited 2018 Sep 21]. Available from: http://urn.kb.se/resolve?urn=urn:nbn:se:lnu:diva-21135.

Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation

Council of Science Editors:

Knapp C. Creating Music Visualizations in a Mandelbrot Set Explorer. [Thesis]. Linnaeus University; 2012. Available from: http://urn.kb.se/resolve?urn=urn:nbn:se:lnu:diva-21135

Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation

Université de Montréal

28. Bergeron, Arnaud. Calcul en n-dimensions sur GPU .

Degree: 2013, Université de Montréal

URL: http://hdl.handle.net/1866/9994

► Le calcul scientifique sur processeurs graphiques (GPU) est en plein essor depuis un certain temps, en particulier dans le domaine de l'apprentissage machine. Cette thèse… (more)

Subjects/Keywords: Calcul scientifique; Python; GPGPU; Scientific computing

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APA (6^th Edition):

Bergeron, A. (2013). Calcul en n-dimensions sur GPU . (Thesis). Université de Montréal. Retrieved from http://hdl.handle.net/1866/9994

Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation

Chicago Manual of Style (16^th Edition):

Bergeron, Arnaud. “Calcul en n-dimensions sur GPU .” 2013. Thesis, Université de Montréal. Accessed September 21, 2018. http://hdl.handle.net/1866/9994.

Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation

MLA Handbook (7^th Edition):

Bergeron, Arnaud. “Calcul en n-dimensions sur GPU .” 2013. Web. 21 Sep 2018.

Vancouver:

Bergeron A. Calcul en n-dimensions sur GPU . [Internet] [Thesis]. Université de Montréal; 2013. [cited 2018 Sep 21]. Available from: http://hdl.handle.net/1866/9994.

Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation

Council of Science Editors:

Bergeron A. Calcul en n-dimensions sur GPU . [Thesis]. Université de Montréal; 2013. Available from: http://hdl.handle.net/1866/9994

Note: this citation may be lacking information needed for this citation format:
Not specified: Masters Thesis or Doctoral Dissertation

University of Toronto

29. Gurfinkel, Steven. The Distribution of OpenCL Kernel Execution Across Multiple Devices.

Degree: 2014, University of Toronto

URL: http://hdl.handle.net/1807/67879

►

Many computer systems now include both CPUs and programmable GPUs. OpenCL, a new programming framework, can program individual CPUs or GPUs; however, distributing a problem… (more)

Subjects/Keywords: Distributed; GPGPU; GPU; Heterogeneous; OpenCL; 0464

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APA · Chicago · MLA · Vancouver · CSE | Export to Zotero / EndNote / Reference Manager

APA (6^th Edition):

Gurfinkel, S. (2014). The Distribution of OpenCL Kernel Execution Across Multiple Devices. (Masters Thesis). University of Toronto. Retrieved from http://hdl.handle.net/1807/67879

Chicago Manual of Style (16^th Edition):

Gurfinkel, Steven. “The Distribution of OpenCL Kernel Execution Across Multiple Devices.” 2014. Masters Thesis, University of Toronto. Accessed September 21, 2018. http://hdl.handle.net/1807/67879.

MLA Handbook (7^th Edition):

Gurfinkel, Steven. “The Distribution of OpenCL Kernel Execution Across Multiple Devices.” 2014. Web. 21 Sep 2018.

Vancouver:

Gurfinkel S. The Distribution of OpenCL Kernel Execution Across Multiple Devices. [Internet] [Masters thesis]. University of Toronto; 2014. [cited 2018 Sep 21]. Available from: http://hdl.handle.net/1807/67879.

Council of Science Editors:

Gurfinkel S. The Distribution of OpenCL Kernel Execution Across Multiple Devices. [Masters Thesis]. University of Toronto; 2014. Available from: http://hdl.handle.net/1807/67879

University of Toronto

30. Feng, Cheng Xiang. A Sampling-based Approach to GPGPU Performance Auto-tuning.

Degree: 2017, University of Toronto

URL: http://hdl.handle.net/1807/79091

►

We present a novel strategy for automatic performance tuning of GPU programs. The strategy combines heuristic search with regression trees, a machine learning model, to… (more)

Subjects/Keywords: Auto-tuning; GPGPU; Regression Trees; 0464

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APA · Chicago · MLA · Vancouver · CSE | Export to Zotero / EndNote / Reference Manager

APA (6^th Edition):

Feng, C. X. (2017). A Sampling-based Approach to GPGPU Performance Auto-tuning. (Masters Thesis). University of Toronto. Retrieved from http://hdl.handle.net/1807/79091

Chicago Manual of Style (16^th Edition):

Feng, Cheng Xiang. “A Sampling-based Approach to GPGPU Performance Auto-tuning.” 2017. Masters Thesis, University of Toronto. Accessed September 21, 2018. http://hdl.handle.net/1807/79091.

MLA Handbook (7^th Edition):

Feng, Cheng Xiang. “A Sampling-based Approach to GPGPU Performance Auto-tuning.” 2017. Web. 21 Sep 2018.

Vancouver:

Feng CX. A Sampling-based Approach to GPGPU Performance Auto-tuning. [Internet] [Masters thesis]. University of Toronto; 2017. [cited 2018 Sep 21]. Available from: http://hdl.handle.net/1807/79091.

Council of Science Editors:

Feng CX. A Sampling-based Approach to GPGPU Performance Auto-tuning. [Masters Thesis]. University of Toronto; 2017. Available from: http://hdl.handle.net/1807/79091

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Open Access Theses and Dissertations