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Dalhousie University
1.
Tse, Brenda.
IDENTIFICATION AND CHARACTERIZATION OF PROMYELOCYTIC
LEUKEMIA (PML)-ISOFORM 1 SPECIFIC PROTEIN-PROTEIN
INTERACTIONS.
Degree: MS, Department of Pathology, 2012, Dalhousie University
URL: http://hdl.handle.net/10222/15493
Loss of the promyelocytic leukemia (PML) protein is
associated with genomic instability/cancer. There are several
isoforms of the PML protein that localize in PML nuclear bodies
(PML NBs). How each individual isoform contributes to the functions
of PML NBs is unknown. The objective of this study was to identify
and characterize PML isoform-I (PML-I) specific protein-protein
interactions. Using yeast two-hybrid screens, several interacting
partners of PML-I were identified that play roles in translational
regulation, including eukaryotic initiation factor 3 subunit K
(eIF3K). Our studies demonstrated that eIF3K interacts with PML-I
in vitro and in vivo. Through its interaction with eIF3K,
overexpression of PML-I resulted in the concomitant increase in
eIF3K protein levels in mammalian cells. This suggests that PML-I
may be involved in regulating eIF3K protein translation or
stability, which in turn could affect translation of specific mRNAs
or global translation in cancer cells with reduced expression of
PML-I.
Advisors/Committee Members: Dr. Catherine Too (external-examiner), Dr. Wenda Greer (graduate-coordinator), Dr. Melanie Dobson (thesis-reader), Dr. David Waisman (thesis-reader), Dr. Graham Dellaire (thesis-supervisor), Not Applicable (ethics-approval), Not Applicable (manuscripts), Not Applicable (copyright-release).
Subjects/Keywords: PML and PML isoforms; PML nuclear bodies; eIF3K; Translation initiation; Yeast two-hybrid screen
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APA (6th Edition):
Tse, B. (2012). IDENTIFICATION AND CHARACTERIZATION OF PROMYELOCYTIC
LEUKEMIA (PML)-ISOFORM 1 SPECIFIC PROTEIN-PROTEIN
INTERACTIONS. (Masters Thesis). Dalhousie University. Retrieved from http://hdl.handle.net/10222/15493
Chicago Manual of Style (16th Edition):
Tse, Brenda. “IDENTIFICATION AND CHARACTERIZATION OF PROMYELOCYTIC
LEUKEMIA (PML)-ISOFORM 1 SPECIFIC PROTEIN-PROTEIN
INTERACTIONS.” 2012. Masters Thesis, Dalhousie University. Accessed January 19, 2021.
http://hdl.handle.net/10222/15493.
MLA Handbook (7th Edition):
Tse, Brenda. “IDENTIFICATION AND CHARACTERIZATION OF PROMYELOCYTIC
LEUKEMIA (PML)-ISOFORM 1 SPECIFIC PROTEIN-PROTEIN
INTERACTIONS.” 2012. Web. 19 Jan 2021.
Vancouver:
Tse B. IDENTIFICATION AND CHARACTERIZATION OF PROMYELOCYTIC
LEUKEMIA (PML)-ISOFORM 1 SPECIFIC PROTEIN-PROTEIN
INTERACTIONS. [Internet] [Masters thesis]. Dalhousie University; 2012. [cited 2021 Jan 19].
Available from: http://hdl.handle.net/10222/15493.
Council of Science Editors:
Tse B. IDENTIFICATION AND CHARACTERIZATION OF PROMYELOCYTIC
LEUKEMIA (PML)-ISOFORM 1 SPECIFIC PROTEIN-PROTEIN
INTERACTIONS. [Masters Thesis]. Dalhousie University; 2012. Available from: http://hdl.handle.net/10222/15493

Dalhousie University
2.
Racine, Trina.
THE AVIAN REOVIRUS TRICISTRONIC S1 mRNA: NEW INSIGHTS INTO
CONTROL OF TRANSLATION INITIATION.
Degree: PhD, Department of Microbiology &
Immunology, 2010, Dalhousie University
URL: http://hdl.handle.net/10222/12842
The S1 genome segment of avian reovirus is
functionally tricistronic, encoding three independent protein
products (named p10, p17 and ?C) from three sequential, partially
overlapping open reading frames (ORFs). The dogma of translation
initiation, the cap-dependent scanning model, suggests that
ribosomes would normally only translate the 5?-proximal ORF. Four
alternate mechanisms of translation initiation could account for
translation of the downstream ?C ORF; an IRES element,
reinitiation, ribosome shunting, and leaky scanning. The objective
of my doctoral research was to investigate the translation
initiation mechanisms that are operative on the S1 mRNA.
Translation of the p10 and p17 ORFs was revealed to be coordinated
via standard leaky scanning, while none of the known mechanisms of
translation initiation could account for expression of the ?C ORF.
Further investigation determined that two alternate cap-dependent
mechanisms contribute to translation initiation at the ?C AUG
codon. The first mechanism involves a modified version of enhanced
leaky scanning. Although insertion of upstream elements known to
impede scanning ribosomal subunits dramatically inhibited
translation of the downstream ORF in the context of other mRNAs,
the same elements only marginally reduced ?C translation. Specific
features of the S1 mRNA therefore function to promote leaky
scanning and translation of the ?C ORF. The inability to eliminate
?C expression beyond a threshold retention level of ~20-30%,
despite the presence of eight upstream start codons that should
eliminate leaky scanning, strongly suggests that ribosomes must
also utilize a scanning-independent means to access the internal ?C
start site. This mechanism for ?C translation initiation, which I
termed ribosome handoff, allows ribosomes to bypass upstream
elements, and requires a sequence-dependent translation enhancer
element present within S1 nucleotides 366-392 that may function to
mediate handoff via complementarity with 18S ribosomal RNA.
Translation initiation at the ?C start site is therefore made
possible by two alternative mechanisms, enhanced leaky scanning and
ribosome handoff from the 5?-cap. The novelty of these two
mechanisms highlights the complexity of the translation initiation
process and the potential heterogeneity of cellular ribosomes,
which raises the possibility that internal initiation may be far
more common than currently appreciated.
Advisors/Committee Members: Dr. John Patton (external-examiner), Dr. Brent Johnston (graduate-coordinator), Dr. Christine Barnes (thesis-reader), Dr. Melanie Dobson (thesis-reader), Dr. Patrick Lee (thesis-reader), Dr. Roy Duncan (thesis-supervisor), Not Applicable (ethics-approval), Not Applicable (manuscripts), Not Applicable (copyright-release).
Subjects/Keywords: Translation Initiation; Avian Reovirus; S1 mRNA
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❌
APA ·
Chicago ·
MLA ·
Vancouver ·
CSE |
Export
to Zotero / EndNote / Reference
Manager
APA (6th Edition):
Racine, T. (2010). THE AVIAN REOVIRUS TRICISTRONIC S1 mRNA: NEW INSIGHTS INTO
CONTROL OF TRANSLATION INITIATION. (Doctoral Dissertation). Dalhousie University. Retrieved from http://hdl.handle.net/10222/12842
Chicago Manual of Style (16th Edition):
Racine, Trina. “THE AVIAN REOVIRUS TRICISTRONIC S1 mRNA: NEW INSIGHTS INTO
CONTROL OF TRANSLATION INITIATION.” 2010. Doctoral Dissertation, Dalhousie University. Accessed January 19, 2021.
http://hdl.handle.net/10222/12842.
MLA Handbook (7th Edition):
Racine, Trina. “THE AVIAN REOVIRUS TRICISTRONIC S1 mRNA: NEW INSIGHTS INTO
CONTROL OF TRANSLATION INITIATION.” 2010. Web. 19 Jan 2021.
Vancouver:
Racine T. THE AVIAN REOVIRUS TRICISTRONIC S1 mRNA: NEW INSIGHTS INTO
CONTROL OF TRANSLATION INITIATION. [Internet] [Doctoral dissertation]. Dalhousie University; 2010. [cited 2021 Jan 19].
Available from: http://hdl.handle.net/10222/12842.
Council of Science Editors:
Racine T. THE AVIAN REOVIRUS TRICISTRONIC S1 mRNA: NEW INSIGHTS INTO
CONTROL OF TRANSLATION INITIATION. [Doctoral Dissertation]. Dalhousie University; 2010. Available from: http://hdl.handle.net/10222/12842

Dalhousie University
3.
Holloway, Ryan.
MACROPHAGE AEBP1 CONTRIBUTES TO MAMMARY EPITHELIAL CELL
HYPERPLASIA AS A NOVEL REGULATOR OF SONIC HEDGEHOG
SIGNALLING.
Degree: MS, Department of Biochemistry & Molecular
Biology, 2012, Dalhousie University
URL: http://hdl.handle.net/10222/15828
Chronic inflammation stimulates mammary tumourigenesis
by disrupting signalling interactions between the epithelial ducts
and the surrounding stromal microenvironment. Adipocyte
enhancer-binding protein 1 (AEBP1) promotes mammary epithelial cell
hyperplasia as a stromal factor that enhances activity of the
proinflammatory transcription factor Nuclear Factor-?B (NF-?B) in
macrophages. Aberrant NF-?B activity in macrophages elevates
production of proinflammatory signals and the ligand sonic hedgehog
(Shh), a significant contributor to tumourigenesis. In this study,
Shh expression was elevated in macrophages isolated from transgenic
mice (AEBP1TG) that overexpress AEBP1. Transient overexpression of
AEBP1 in a macrophage cell line resulted in increased Shh
expression. Furthermore, hedgehog target genes Gli1 and Bmi1 were
up-regulated in mammary epithelium of AEBP1TG mice and HC11 mammary
epithelial cells co-cultured with AEBP1TG macrophages. Growth of
HC11 cells and mammary tumours was enhanced in response to AEBP1TG
macrophages. These findings suggest that macrophage AEBP1
overexpression contributes to mammary hyperplasia through enhanced
hedgehog signalling.
Advisors/Committee Members: n/a (external-examiner), Dr. Richard Singer (graduate-coordinator), Dr. Melanie Dobson (thesis-reader), Dr. Graham Dellaire (thesis-reader), Dr. Paola Marignani (thesis-reader), Dr. Hyo-Sung Ro (thesis-supervisor), Received (ethics-approval), Yes (manuscripts), Yes (copyright-release).
Subjects/Keywords: hyperplasia; Sonic hedgehog; mammary gland; macrophage; AEBP1
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❌
APA ·
Chicago ·
MLA ·
Vancouver ·
CSE |
Export
to Zotero / EndNote / Reference
Manager
APA (6th Edition):
Holloway, R. (2012). MACROPHAGE AEBP1 CONTRIBUTES TO MAMMARY EPITHELIAL CELL
HYPERPLASIA AS A NOVEL REGULATOR OF SONIC HEDGEHOG
SIGNALLING. (Masters Thesis). Dalhousie University. Retrieved from http://hdl.handle.net/10222/15828
Chicago Manual of Style (16th Edition):
Holloway, Ryan. “MACROPHAGE AEBP1 CONTRIBUTES TO MAMMARY EPITHELIAL CELL
HYPERPLASIA AS A NOVEL REGULATOR OF SONIC HEDGEHOG
SIGNALLING.” 2012. Masters Thesis, Dalhousie University. Accessed January 19, 2021.
http://hdl.handle.net/10222/15828.
MLA Handbook (7th Edition):
Holloway, Ryan. “MACROPHAGE AEBP1 CONTRIBUTES TO MAMMARY EPITHELIAL CELL
HYPERPLASIA AS A NOVEL REGULATOR OF SONIC HEDGEHOG
SIGNALLING.” 2012. Web. 19 Jan 2021.
Vancouver:
Holloway R. MACROPHAGE AEBP1 CONTRIBUTES TO MAMMARY EPITHELIAL CELL
HYPERPLASIA AS A NOVEL REGULATOR OF SONIC HEDGEHOG
SIGNALLING. [Internet] [Masters thesis]. Dalhousie University; 2012. [cited 2021 Jan 19].
Available from: http://hdl.handle.net/10222/15828.
Council of Science Editors:
Holloway R. MACROPHAGE AEBP1 CONTRIBUTES TO MAMMARY EPITHELIAL CELL
HYPERPLASIA AS A NOVEL REGULATOR OF SONIC HEDGEHOG
SIGNALLING. [Masters Thesis]. Dalhousie University; 2012. Available from: http://hdl.handle.net/10222/15828
.