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Colorado State University
1.
Sutanto, Yadi Cahyadi.
Highly pathogenic avian influenza knowledge, attitudes, and practices study among live bird market workers in Jakarta - Indonesia.
Degree: MS(M.S.), Clinical Sciences, 2013, Colorado State University
URL: http://hdl.handle.net/10217/79190
► Throughout the world, Indonesia is one of the countries most affected by the outbreak of the highly pathogenic avian influenza (HPAI) subtype H5N1. The outbreak…
(more)
▼ Throughout the world, Indonesia is one of the countries most affected by the outbreak of the highly pathogenic avian influenza (HPAI) subtype H5N1. The outbreak has killed 160 out of 192 human cases during 2005 to 2012, the fatality rate being especially high in children and young adults (WHO, 2013), caused over 470 million USD in economic losses (KOMNAS, 2008a) and disrupted the lives of more than 20 million people who depend on the poultry industry (BPS, 2003) for their livelihood. Indonesia received from the international community the largest financial commitment to fight HPAI, totaling to more than 128 million USD (FAO, 2008a). Highly pathogenic avian influenza also affected the capital city of Jakarta. In an effort to minimize disruption to public health from the outbreak of HPAI, Jakarta provincial government has issued a local regulation (Peraturan Daerah) Number 4/2007 on the Control, Raising, and Distribution of Poultry in Jakarta. Despite the fact that Jakarta has a high risk of public health problems due to HPAI, there is no effective enforcement of the local HPAI control regulation in the city, thus the poultry collection sites and traditional slaughter houses continue to conduct unsafe practices of poultry slaughter. To overcome this problem, information is needed to know how much the poultry industry, especially the Live Bird Markets (LBMs), in Jakarta knows about the risk of HPAI in their community. The level of knowledge and perception of safe poultry handling practices regarding the risk of highly pathogenic avian influenza among workers in LBM can be assessed using a Knowledge, Attitudes, and Practices (KAP) Study. The results of this study illustrate that, despite being given information, LBM workers had no detailed understanding of avian influenza, had a less perceived risk of experiencing avian influenza, and had a low compliance with precautionary behaviors. As a result, biosecurity in the LBMs is woefully inadequate, increasing the threat of another serious outbreak of HPAI in poultry and perhaps in humans as well. Encouragingly, workers' interest in learning more about avian influenza was high in this survey. Therefore, designing and implementing avian influenza educational programs and measuring their effectiveness should be priorities to encourage the population to take a more active role.
Advisors/Committee Members: Salman, M. D. (advisor), Gillette, Shana C. (committee member), Peel, Jennifer L. (committee member).
Subjects/Keywords: attitudes; highly pathogenic avian influenza; Indonesia; knowledge; live bird market; practices
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APA (6th Edition):
Sutanto, Y. C. (2013). Highly pathogenic avian influenza knowledge, attitudes, and practices study among live bird market workers in Jakarta - Indonesia. (Masters Thesis). Colorado State University. Retrieved from http://hdl.handle.net/10217/79190
Chicago Manual of Style (16th Edition):
Sutanto, Yadi Cahyadi. “Highly pathogenic avian influenza knowledge, attitudes, and practices study among live bird market workers in Jakarta - Indonesia.” 2013. Masters Thesis, Colorado State University. Accessed March 03, 2021.
http://hdl.handle.net/10217/79190.
MLA Handbook (7th Edition):
Sutanto, Yadi Cahyadi. “Highly pathogenic avian influenza knowledge, attitudes, and practices study among live bird market workers in Jakarta - Indonesia.” 2013. Web. 03 Mar 2021.
Vancouver:
Sutanto YC. Highly pathogenic avian influenza knowledge, attitudes, and practices study among live bird market workers in Jakarta - Indonesia. [Internet] [Masters thesis]. Colorado State University; 2013. [cited 2021 Mar 03].
Available from: http://hdl.handle.net/10217/79190.
Council of Science Editors:
Sutanto YC. Highly pathogenic avian influenza knowledge, attitudes, and practices study among live bird market workers in Jakarta - Indonesia. [Masters Thesis]. Colorado State University; 2013. Available from: http://hdl.handle.net/10217/79190

Colorado State University
2.
Arief, Riana Aryani.
Dog demography and population estimates for rabies control in Bali, Indonesia.
Degree: MS(M.S.), Clinical Sciences, 2014, Colorado State University
URL: http://hdl.handle.net/10217/83878
► Rabies is a fatal zoonotic disease with global significance. At the end of 2008, rabies emerged in the Island of Bali, Indonesia, drawing international attention.…
(more)
▼ Rabies is a fatal zoonotic disease with global significance. At the end of 2008, rabies emerged in the Island of Bali, Indonesia, drawing international attention. As the disease became wide-spread, the government focused on island-wide mass vaccination of dogs and improving public awareness, however the local dog population is not well documented. The Center for Indonesian Veterinary Analytical Studies (CIVAS), a local non-government organization in Indonesia, and the International Livestock Research Institute (ILRI) initiated a project to explore the link between the dog population and local communities in Bali with focus on the impact of this relationship in the spread of rabies. As part of that project, the objective of the study is to (1) characterize the demographics and rabies vaccination of owned and free-roaming dogs and (2) estimate the abundance and identify factors associated with the distribution of the dogs in Bali. The study was conducted on two dog subpopulations, owned and free-roaming dogs, in 310 banjars in Denpasar city, Gianyar district, and Karangasem district in Bali. Banjar is a subvillage structure in Bali. The sampling design was a two-stage sampling with villages as the primary sampling unit and banjars as the secondary sampling unit. Data were collected between March 2011 and March 2012. Survey of owned dogs was carried out through door to door interview of owners and photographic mark recapture was used to collect data on free-roaming dogs. Dogs were predominantly owned and the effect of unowned dogs towards the total population was minimal. Demographically, the sex ratio was male-biased and juveniles make up 15-20% of the population. Free-roaming dogs were dominated by adults and a higher proportion of males. There were differences in the demographics of dogs in urban and non-urban areas which should be considered when planning and implementing control programs. Overall vaccination coverage was high (>70%), however juveniles and females have a higher likelihood of not being vaccinated. The endurance of vaccination collars should be improved to better represent the true vaccination coverage in free-roaming dogs as there is high confidence that most free-roaming dogs were actually owned dogs. Recent culling was associated with increased proportions of juveniles and a 40% higher risk of dogs not being vaccinated. The observation of free-roaming dogs should always account for detection probability as only 20% of dogs in this study were seen at any given time. Failure to account for detection probability will result in severe underestimation of the population abundance. The human population, presence of a forest and recent culling accounted for 28% of variation in the number of owned dogs in banjars. Accordingly, the number of owned dogs and presence of rice paddies accounted for 61% of variation in the number of free-roaming dogs in banjars. Finally, the overall and median human to dog ratios were the least biased ratios available for estimating the overall dog population, however it…
Advisors/Committee Members: Salman, M. D. (advisor), McCluskey, Brian J. (committee member), Doherty, Paul F. (committee member).
Subjects/Keywords: demography; dog; mark recapture; population estimation; rabies; vaccination
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APA ·
Chicago ·
MLA ·
Vancouver ·
CSE |
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to Zotero / EndNote / Reference
Manager
APA (6th Edition):
Arief, R. A. (2014). Dog demography and population estimates for rabies control in Bali, Indonesia. (Masters Thesis). Colorado State University. Retrieved from http://hdl.handle.net/10217/83878
Chicago Manual of Style (16th Edition):
Arief, Riana Aryani. “Dog demography and population estimates for rabies control in Bali, Indonesia.” 2014. Masters Thesis, Colorado State University. Accessed March 03, 2021.
http://hdl.handle.net/10217/83878.
MLA Handbook (7th Edition):
Arief, Riana Aryani. “Dog demography and population estimates for rabies control in Bali, Indonesia.” 2014. Web. 03 Mar 2021.
Vancouver:
Arief RA. Dog demography and population estimates for rabies control in Bali, Indonesia. [Internet] [Masters thesis]. Colorado State University; 2014. [cited 2021 Mar 03].
Available from: http://hdl.handle.net/10217/83878.
Council of Science Editors:
Arief RA. Dog demography and population estimates for rabies control in Bali, Indonesia. [Masters Thesis]. Colorado State University; 2014. Available from: http://hdl.handle.net/10217/83878

Colorado State University
3.
Reeves, Aaron.
Construction and evaluation of epidemiologic simulation models for the within- and among-unit spread and control of infectious diseases of livestock and poultry.
Degree: PhD, Clinical Sciences, 2012, Colorado State University
URL: http://hdl.handle.net/10217/71580
► Epidemiologic modeling is an increasingly common method of estimating the potential impact of outbreaks of highly contagious diseases, such as foot-and-mouth disease (FMD) and highly…
(more)
▼ Epidemiologic modeling is an increasingly common method of estimating the potential impact of outbreaks of highly contagious diseases, such as foot-and-mouth disease (FMD) and highly pathogenic avian influenza (HPAI), in populations of domesticated animals. Disease models are also used to inform policy decisions regarding disease control methods and outbreak response plans, to estimate the possible magnitude of an outbreak, and to estimate the resources needed for outbreak response. Although disease models are computationally sophisticated, the quality of the results of modeling studies depends on the quality and accuracy of the data on which they are based, and on the conceptual soundness and validity of the models themselves. For such models to be credibly applied, they should realistically represent the systems they are intended to reflect, should be based to as great an extent as possible on valid data, and should be subjected to careful and ongoing scrutiny. Two key steps in the evaluation of epidemiologic models are model verification and model validation. Verification is the demonstration that a computer-driven model is operating correctly, and conforms to its intended design. Validation refers to the process of determining how well a model corresponds to the system that it intended to represent. For a veterinary epidemiologic model, validation would address issues such as how well the model represents the dynamics of the disease in question in a population to which the model is applied, and how well the model represents the application of different measures for disease control. Among the steps that can be taken by epidemiologic modelers to facilitate the processes of model verification and validation are to clearly
state the purpose, assumptions, and limitations of a model; to provide a detailed description of the conceptual model for use by everyone who might be tasked with evaluation of a model; document steps already taken to test the model; and thoroughly describe the data sources and the process used to produce model input parameters from data. The realistic representation of the dynamics of spread of disease within individual herds or flocks can have important implications for disease detection and surveillance, as well as for disease transmission between herds or flocks. We have developed a simulation model of within-unit (within-herd or within-flock) disease spread that operates at the level of the individual animal, and fully incorporates sources of individual-level variation such as variability in the durations of incubating and infectious periods, the stochastic nature of disease spread among individuals, and the effects of vaccination. We describe this stochastic model, along with the processes employed for verification and validation. The incorporation of this approach to modeling of within-unit disease dynamics into models of between-unit disease spread should improve the utility of these models for emergency preparedness and response planning by making it possible to assess the…
Advisors/Committee Members: Salman, M. D. (advisor), Hill, Ashley E. (advisor), Keefe, Thomas J. (committee member), Wagner, Bruce A. (committee member).
Subjects/Keywords: epidemiologic modeling; foot-and-mouth disease; highly pathogenic avian influenza; simulation modeling; stochastic simulation
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❌
APA ·
Chicago ·
MLA ·
Vancouver ·
CSE |
Export
to Zotero / EndNote / Reference
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APA (6th Edition):
Reeves, A. (2012). Construction and evaluation of epidemiologic simulation models for the within- and among-unit spread and control of infectious diseases of livestock and poultry. (Doctoral Dissertation). Colorado State University. Retrieved from http://hdl.handle.net/10217/71580
Chicago Manual of Style (16th Edition):
Reeves, Aaron. “Construction and evaluation of epidemiologic simulation models for the within- and among-unit spread and control of infectious diseases of livestock and poultry.” 2012. Doctoral Dissertation, Colorado State University. Accessed March 03, 2021.
http://hdl.handle.net/10217/71580.
MLA Handbook (7th Edition):
Reeves, Aaron. “Construction and evaluation of epidemiologic simulation models for the within- and among-unit spread and control of infectious diseases of livestock and poultry.” 2012. Web. 03 Mar 2021.
Vancouver:
Reeves A. Construction and evaluation of epidemiologic simulation models for the within- and among-unit spread and control of infectious diseases of livestock and poultry. [Internet] [Doctoral dissertation]. Colorado State University; 2012. [cited 2021 Mar 03].
Available from: http://hdl.handle.net/10217/71580.
Council of Science Editors:
Reeves A. Construction and evaluation of epidemiologic simulation models for the within- and among-unit spread and control of infectious diseases of livestock and poultry. [Doctoral Dissertation]. Colorado State University; 2012. Available from: http://hdl.handle.net/10217/71580

Colorado State University
4.
Howard, Scott Thomas.
Beef tenderness and management of calf-fed Holstein steers to meet market standards.
Degree: PhD, Animal Sciences, 2013, Colorado State University
URL: http://hdl.handle.net/10217/80151
► Tenderness is one of the most influential sensory attributes determining consumer acceptance of beef products. Beef at retail represents production of a diverse cattle population,…
(more)
▼ Tenderness is one of the most influential sensory attributes determining consumer acceptance of beef products. Beef at retail represents production of a diverse cattle population, including both beef breeds and cattle bred for milk production. Objectives of this work were to first benchmark tenderness at the retail level and then determine appropriate management strategies to maximize quality and yield of calf-fed Holstein steers. Fifty-four stores in thirty U.S. cities were sampled from June 2011 through May 2012 to benchmark tenderness of beef steaks at retail as assessed by Warner-Bratzler shear force (WBSF).Top loin (N = 980) and sirloin (N = 860) steaks were purchased and shipped via overnight delivery to
Colorado State University, Fort Collins, CO. The survey was divided into two periods based on samples shipped fresh and frozen on arrival (Period 1) or samples shipped frozen and stored frozen (Period 2). Mean WBSF values during Period 1 were 2.9 and 3.9 kg for top loin and sirloin steaks, respectively. Frequencies of steaks classified as tough (WBSF ≥ 4.4 kg) were 8.6% and 17.7% for top loin and sirloin steaks, respectively. Examination of coefficients of variation associated with means reflecting the influence of freezing, retail display and shipping suggested that variance remained unchanged (± 2.0%) with respect to shear force values; however, mean shear force values were reduced as a result of shipping conditions. Mean WBSF values during Period 2 were 3.4 and 4.0 kg for top loin and sirloin samples, respectively. Frequencies of steaks classified as tough were 14.3% and 24.8% for top loin and sirloin steaks, respectively. Calf-fed dairy steers comprise approximately 10% of fed-beef harvested in the United States, annually (Moore et al., 2012).This population of cattle is much different genetically and requires use of growth promotants to meet comparable feedlot performance to that of beef breeds. The effect of beta-agonist supplementation on live performance, carcass characteristics, fabrication yields and beef quality of calf-fed Holstein steers was investigated using steers implanted with a combination trenbolone acetate/estradiol based implant and blocked by initial weight into pens (N = 32). Pens consisted of 90 steers each and were randomly assigned to one of four management strategies including: implant only, ractopamine hydrochloride (RH) fed at 300 mg/hd/
d for the final 30
d of finishing or RH fed at 400 mg/hd/
d for the final 30
d of finishing, and zilpaterol hydrochloride fed at 6.8 g/ton for 23
d with a 3
d withdrawal prior to harvest. Feed efficiency was improved in beta-agonist fed steers 18 to 25% and hot carcass weight was increased by 1.8 to 3.7% (P < 0.05). Beta-agonists increased saleable yield by 0.6 to 1.9%, decreased fat by 0.6 to 1.3% and shifted tissue distribution such that a greater percentage of side weight was comprised of the muscles of the round (P < 0.05). Changes in development were observed as a result of beta-agonist use, specifically as an increased proportion of weight…
Advisors/Committee Members: Belk, Keith E. (advisor), Woerner, Dale R. (committee member), Tatum, J. Daryl (committee member), Scanga, John A. (committee member), Salman, M. D. (committee member).
Subjects/Keywords: beef; tenderness; shipping; beta-agonist; Holstein; audit
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❌
APA ·
Chicago ·
MLA ·
Vancouver ·
CSE |
Export
to Zotero / EndNote / Reference
Manager
APA (6th Edition):
Howard, S. T. (2013). Beef tenderness and management of calf-fed Holstein steers to meet market standards. (Doctoral Dissertation). Colorado State University. Retrieved from http://hdl.handle.net/10217/80151
Chicago Manual of Style (16th Edition):
Howard, Scott Thomas. “Beef tenderness and management of calf-fed Holstein steers to meet market standards.” 2013. Doctoral Dissertation, Colorado State University. Accessed March 03, 2021.
http://hdl.handle.net/10217/80151.
MLA Handbook (7th Edition):
Howard, Scott Thomas. “Beef tenderness and management of calf-fed Holstein steers to meet market standards.” 2013. Web. 03 Mar 2021.
Vancouver:
Howard ST. Beef tenderness and management of calf-fed Holstein steers to meet market standards. [Internet] [Doctoral dissertation]. Colorado State University; 2013. [cited 2021 Mar 03].
Available from: http://hdl.handle.net/10217/80151.
Council of Science Editors:
Howard ST. Beef tenderness and management of calf-fed Holstein steers to meet market standards. [Doctoral Dissertation]. Colorado State University; 2013. Available from: http://hdl.handle.net/10217/80151

Colorado State University
5.
Orahood, Darcy Sonya.
Evaluation of an adjuvanted hapten-protein vaccine approach to preventing sexual maturation of farmed Atlantic salmon.
Degree: MS(M.S.), Clinical Sciences, 2013, Colorado State University
URL: http://hdl.handle.net/10217/81048
► Aquaculture is a rapidly growing industry that significantly contributes to the world food supply. Sustainable practices in aquaculture are of increasing importance as an increasing…
(more)
▼ Aquaculture is a rapidly growing industry that significantly contributes to the world food supply. Sustainable practices in aquaculture are of increasing importance as an increasing proportion of fish in the global market come from aquaculture instead of wild catch. Maximizing aquaculture yields and minimizing the ecological impacts of these operations are two important goals towards sustainability. One approach to addressing these objectives is immunocontraception of fish which would increase the fish meat quality and yield in aquaculture production and prevent escaped farmed fish from undesirably altering wild fish population genetics through breeding. The research presented here was conducted with the aim of proof of concept for contraceptive vaccine use in Atlantic salmon. Nine vaccine formulations, including a negative control vaccine, were formulated at the National Wildlife Research Center in Fort Collins,
Colorado and injected into farmed Atlantic salmon in Sunndalsøra, Norway. Production of antibodies against three immunogenic components in each vaccine formulation was evaluated over the course of the 12-week study. Weight and length of each fish were also tracked over time to determine whether growth was affected by vaccination. The study results indicate that Atlantic salmon will produce antibodies against BSA and KLH used as carrier proteins but that KLH is a stronger immunogen. Importantly, it was also determined that Atlantic salmon will produce antibodies against a small endogenous peptide (hapten) conjugated to the carrier protein, but to a lesser extent than the levels of antibody production against the carrier itself. Approximately 96% of samples from fish vaccinated against KLH, 76% of samples from fish vaccinated against BSA, and 36% of samples from fish vaccinated against the hapten were identified as positive. Response rates for all three antigens were highest 12 weeks post-vaccination. Significant differences in antibody levels were also detected between groups vaccinated with different immunostimulants. Collectively, the results provide proof of concept and provide a building block for further research on immunocontraception of Atlantic salmon for application in aquaculture.
Advisors/Committee Members: Salman, M. D. (advisor), Eckery, Douglas C. (committee member), Miller, Lowell A. (committee member), Myrick, Christopher A. (committee member), Rhyan, Jack C. (committee member).
Subjects/Keywords: vaccine; reproduction; immunocontraception; Atlantic salmon
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❌
APA ·
Chicago ·
MLA ·
Vancouver ·
CSE |
Export
to Zotero / EndNote / Reference
Manager
APA (6th Edition):
Orahood, D. S. (2013). Evaluation of an adjuvanted hapten-protein vaccine approach to preventing sexual maturation of farmed Atlantic salmon. (Masters Thesis). Colorado State University. Retrieved from http://hdl.handle.net/10217/81048
Chicago Manual of Style (16th Edition):
Orahood, Darcy Sonya. “Evaluation of an adjuvanted hapten-protein vaccine approach to preventing sexual maturation of farmed Atlantic salmon.” 2013. Masters Thesis, Colorado State University. Accessed March 03, 2021.
http://hdl.handle.net/10217/81048.
MLA Handbook (7th Edition):
Orahood, Darcy Sonya. “Evaluation of an adjuvanted hapten-protein vaccine approach to preventing sexual maturation of farmed Atlantic salmon.” 2013. Web. 03 Mar 2021.
Vancouver:
Orahood DS. Evaluation of an adjuvanted hapten-protein vaccine approach to preventing sexual maturation of farmed Atlantic salmon. [Internet] [Masters thesis]. Colorado State University; 2013. [cited 2021 Mar 03].
Available from: http://hdl.handle.net/10217/81048.
Council of Science Editors:
Orahood DS. Evaluation of an adjuvanted hapten-protein vaccine approach to preventing sexual maturation of farmed Atlantic salmon. [Masters Thesis]. Colorado State University; 2013. Available from: http://hdl.handle.net/10217/81048
.